RNA–Protein interactions for RNA: ENST00000498628.6

CDKN2A-209, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-209ENST00000498628 AP3S2P59780 193 aa12.52□□□□□ -0.41
CDKN2A-209ENST00000498628 PMS2P11Q13670 270 aa12.52□□□□□ -0.41
CDKN2A-209ENST00000498628 RARRES2Q99969 163 aa12.52□□□□□ -0.41
CDKN2A-209ENST00000498628 U3KQ87 197 aa12.52□□□□□ -0.41
CDKN2A-209ENST00000498628 CSMD3Q7Z407 3707 aa12.51□□□□□ -0.41
CDKN2A-209ENST00000498628 A0A0B4J2A0 478 aa12.51□□□□□ -0.41
CDKN2A-209ENST00000498628 H3BMQ9 156 aa12.51□□□□□ -0.41
CDKN2A-209ENST00000498628 AKR1C4P17516 323 aa12.51□□□□□ -0.41
CDKN2A-209ENST00000498628 NPY1RP25929 384 aa12.51□□□□□ -0.41
CDKN2A-209ENST00000498628 AP2S1P53680 142 aaPredicted RBP12.51□□□□□ -0.41
CDKN2A-209ENST00000498628 ATP5IP56385 69 aaPredicted RBP12.51□□□□□ -0.41
CDKN2A-209ENST00000498628 DEFB131AP59861 70 aa12.51□□□□□ -0.41
CDKN2A-209ENST00000498628 YPEL3P61236 119 aaPredicted RBP12.51□□□□□ -0.41
CDKN2A-209ENST00000498628 TMEM187Q14656 261 aa12.51□□□□□ -0.41
CDKN2A-209ENST00000498628 TIGITQ495A1 244 aa12.51□□□□□ -0.41
CDKN2A-209ENST00000498628 STHQ8IWL8 128 aa12.51□□□□□ -0.41
CDKN2A-209ENST00000498628 LGI3Q8N145 548 aa12.51□□□□□ -0.41
CDKN2A-209ENST00000498628 STXBP6Q8NFX7 210 aa12.51□□□□□ -0.41
CDKN2A-209ENST00000498628 SLIRPQ9GZT3 109 aaKnown RBP12.51□□□□□ -0.41
CDKN2A-209ENST00000498628 SHPKQ9UHJ6 478 aa12.51□□□□□ -0.41
CDKN2A-209ENST00000498628 HELTA6NFD8 242 aa12.5□□□□□ -0.41
CDKN2A-209ENST00000498628 IFNA10P01566 189 aa12.5□□□□□ -0.41
CDKN2A-209ENST00000498628 OR10J1P30954 320 aa12.5□□□□□ -0.41
CDKN2A-209ENST00000498628 P2RY1P47900 373 aa12.5□□□□□ -0.41
CDKN2A-209ENST00000498628 RND2P52198 227 aa12.5□□□□□ -0.41
CDKN2A-209ENST00000498628 SMCO1Q147U7 214 aa12.5□□□□□ -0.41
CDKN2A-209ENST00000498628 ZNF124Q15973 351 aa12.5□□□□□ -0.41
CDKN2A-209ENST00000498628 PRSS54Q6PEW0 395 aa12.5□□□□□ -0.41
CDKN2A-209ENST00000498628 CEMP1Q6PRD7 247 aaPredicted RBP12.5□□□□□ -0.41
CDKN2A-209ENST00000498628 LILRB2Q8N423 598 aa12.5□□□□□ -0.41
CDKN2A-209ENST00000498628 MRPL36Q9P0J6 103 aaKnown RBP12.5□□□□□ -0.41
CDKN2A-209ENST00000498628 PFDN2Q9UHV9 154 aa12.5□□□□□ -0.41
CDKN2A-209ENST00000498628 IGKV1-17P01599 117 aa12.49□□□□□ -0.41
CDKN2A-209ENST00000498628 HNRNPCP07910 306 aaKnown RBP eCLIP12.49□□□□□ -0.41
CDKN2A-209ENST00000498628 S100A5P33763 92 aa12.49□□□□□ -0.41
CDKN2A-209ENST00000498628 PYDC2Q56P42 97 aa12.49□□□□□ -0.41
CDKN2A-209ENST00000498628 TMEM41BQ5BJD5 291 aa12.49□□□□□ -0.41
CDKN2A-209ENST00000498628 NMSQ5H8A3 153 aa12.49□□□□□ -0.41
CDKN2A-209ENST00000498628 TOMM5Q8N4H5 51 aa12.49□□□□□ -0.41
CDKN2A-209ENST00000498628 LYSTQ99698 3801 aa12.49□□□□□ -0.41
CDKN2A-209ENST00000498628 SOSTQ9BQB4 213 aa12.49□□□□□ -0.41
CDKN2A-209ENST00000498628 CCDC160A6NGH7 325 aa12.48□□□□□ -0.41
CDKN2A-209ENST00000498628 CA1P00915 261 aaPredicted RBP12.48□□□□□ -0.41
CDKN2A-209ENST00000498628 IGLC1P0CG04 106 aa12.48□□□□□ -0.41
CDKN2A-209ENST00000498628 LEMD1Q68G75 181 aa12.48□□□□□ -0.41
CDKN2A-209ENST00000498628 OR11H2Q8NH07 326 aa12.48□□□□□ -0.41
CDKN2A-209ENST00000498628 OR1S1Q8NH92 325 aa12.48□□□□□ -0.41
CDKN2A-209ENST00000498628 DTD1Q8TEA8 209 aa12.48□□□□□ -0.41
CDKN2A-209ENST00000498628 DEDD2Q8WXF8 326 aa12.48□□□□□ -0.41
CDKN2A-209ENST00000498628 MFFQ9GZY8 342 aa12.48□□□□□ -0.41
CDKN2A-209ENST00000498628 DUXBA0A1W2PPF3 345 aa12.47□□□□□ -0.41
CDKN2A-209ENST00000498628 K7EQG2 157 aa12.47□□□□□ -0.41
CDKN2A-209ENST00000498628 NXPH3O95157 252 aa12.47□□□□□ -0.41
CDKN2A-209ENST00000498628 RD3LP0DJH9 198 aa12.47□□□□□ -0.41
CDKN2A-209ENST00000498628 NUP62P37198 522 aaPredicted RBP12.47□□□□□ -0.41
CDKN2A-209ENST00000498628 RBMS2Q15434 407 aaKnown RBP12.47□□□□□ -0.41
CDKN2A-209ENST00000498628 MORN3Q6PF18 240 aaPredicted RBP12.47□□□□□ -0.41
CDKN2A-209ENST00000498628 NPIPB3Q92617 1050 aa12.47□□□□□ -0.41
CDKN2A-209ENST00000498628 ACY3Q96HD9 319 aa12.47□□□□□ -0.41
CDKN2A-209ENST00000498628 HSPB7Q9UBY9 170 aa12.47□□□□□ -0.41
CDKN2A-209ENST00000498628 TOMM40O96008 361 aa12.46□□□□□ -0.41
CDKN2A-209ENST00000498628 IFNA4P05014 189 aa12.46□□□□□ -0.41
CDKN2A-209ENST00000498628 IL4P05112 153 aa12.46□□□□□ -0.41
CDKN2A-209ENST00000498628 FABP1P07148 127 aa12.46□□□□□ -0.41
CDKN2A-209ENST00000498628 DHRS2Q13268 280 aa12.46□□□□□ -0.41
CDKN2A-209ENST00000498628 TMEM128Q5BJH2 165 aa12.46□□□□□ -0.41
CDKN2A-209ENST00000498628 LYZL2Q7Z4W2 148 aa12.46□□□□□ -0.41
CDKN2A-209ENST00000498628 SLC25A21Q9BQT8 299 aaPredicted RBP12.46□□□□□ -0.41
CDKN2A-209ENST00000498628 RBKSQ9H477 322 aa12.46□□□□□ -0.41
CDKN2A-209ENST00000498628 U3KQE9 123 aa12.46□□□□□ -0.41
CDKN2A-209ENST00000498628 LY6G6CO95867 125 aa12.45□□□□□ -0.42
CDKN2A-209ENST00000498628 SPP1P10451 314 aa12.45□□□□□ -0.42
CDKN2A-209ENST00000498628 GPX4P36969 197 aaPredicted RBP12.45□□□□□ -0.42
CDKN2A-209ENST00000498628 RAB11AP62491 216 aa12.45□□□□□ -0.42
CDKN2A-209ENST00000498628 SUPT4H1P63272 117 aaKnown RBP12.45□□□□□ -0.42
CDKN2A-209ENST00000498628 KLF9Q13886 244 aaPredicted RBP12.45□□□□□ -0.42
CDKN2A-209ENST00000498628 C16orf54Q6UWD8 224 aa12.45□□□□□ -0.42
CDKN2A-209ENST00000498628 TMED4Q7Z7H5 227 aa12.45□□□□□ -0.42
CDKN2A-209ENST00000498628 LINC00476Q8WZB0 136 aa12.45□□□□□ -0.42
CDKN2A-209ENST00000498628 SLC35E1Q96K37 410 aa12.45□□□□□ -0.42
CDKN2A-209ENST00000498628 C11orf68Q9H3H3 251 aaKnown RBP12.45□□□□□ -0.42
CDKN2A-209ENST00000498628 PRR13Q9NZ81 148 aa12.45□□□□□ -0.42
CDKN2A-209ENST00000498628 DNAH1Q9P2D7 4330 aa12.45□□□□□ -0.42
CDKN2A-209ENST00000498628 MED6O75586 246 aa12.44□□□□□ -0.42
CDKN2A-209ENST00000498628 ZNF688P0C7X2 276 aa12.44□□□□□ -0.42
CDKN2A-209ENST00000498628 SNRPD3P62318 126 aaKnown RBP12.44□□□□□ -0.42
CDKN2A-209ENST00000498628 RPP30P78346 268 aaKnown RBP12.44□□□□□ -0.42
CDKN2A-209ENST00000498628 EWSR1Q01844 656 aaKnown RBP eCLIP12.44□□□□□ -0.42
CDKN2A-209ENST00000498628 CENPSQ8N2Z9 138 aa12.44□□□□□ -0.42
CDKN2A-209ENST00000498628 FAM24BQ8N5W8 94 aa12.44□□□□□ -0.42
CDKN2A-209ENST00000498628 C11orf45Q8TAV5 145 aa12.44□□□□□ -0.42
CDKN2A-209ENST00000498628 PHLDA1Q8WV24 401 aaPredicted RBP12.44□□□□□ -0.42
CDKN2A-209ENST00000498628 SEPSECSQ9HD40 501 aaKnown RBP12.44□□□□□ -0.42
CDKN2A-209ENST00000498628 VAMP1P23763 118 aa12.43□□□□□ -0.42
CDKN2A-209ENST00000498628 OR51G1Q8NGK1 321 aa12.43□□□□□ -0.42
CDKN2A-209ENST00000498628 DCANP1Q8TF63 244 aa12.43□□□□□ -0.42
CDKN2A-209ENST00000498628 TMEM170AQ8WVE7 144 aa12.43□□□□□ -0.42
CDKN2A-209ENST00000498628 ZFP92A6NM28 416 aa12.42□□□□□ -0.42
CDKN2A-209ENST00000498628 FAM90A26D6RGX4 464 aa12.42□□□□□ -0.42
CDKN2A-209ENST00000498628 PSG1P11464 419 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms