RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 LINC00336Q6ZUF6 198 aa12.26□□□□□ -0.45
TRAPPC3-207ENST00000497251 TRPT1Q86TN4 253 aaKnown RBP12.26□□□□□ -0.45
TRAPPC3-207ENST00000497251 FAM219AQ8IW50 185 aa12.26□□□□□ -0.45
TRAPPC3-207ENST00000497251 LILRB2Q8N423 598 aa12.26□□□□□ -0.45
TRAPPC3-207ENST00000497251 DEDD2Q8WXF8 326 aa12.26□□□□□ -0.45
TRAPPC3-207ENST00000497251 TRIM63Q969Q1 353 aa12.26□□□□□ -0.45
TRAPPC3-207ENST00000497251 RRNAD1Q96FB5 475 aaKnown RBP12.26□□□□□ -0.45
TRAPPC3-207ENST00000497251 NAA60Q9H7X0 242 aa12.26□□□□□ -0.45
TRAPPC3-207ENST00000497251 SEPSECSQ9HD40 501 aaKnown RBP12.26□□□□□ -0.45
TRAPPC3-207ENST00000497251 APLNQ9ULZ1 77 aa12.26□□□□□ -0.45
TRAPPC3-207ENST00000497251 TEX13DA0A0J9YY54 714 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC3-207ENST00000497251 RPS10-NUDT3A0A1W2PQS6 291 aa12.25□□□□□ -0.45
TRAPPC3-207ENST00000497251 HELTA6NFD8 242 aa12.25□□□□□ -0.45
TRAPPC3-207ENST00000497251 CRYM-AS1A6NIL9 109 aa12.25□□□□□ -0.45
TRAPPC3-207ENST00000497251 IGLL5B9A064 214 aa12.25□□□□□ -0.45
TRAPPC3-207ENST00000497251 K7EQG2 157 aa12.25□□□□□ -0.45
TRAPPC3-207ENST00000497251 APOHP02749 345 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC3-207ENST00000497251 OR5AC1P0C628 307 aa12.25□□□□□ -0.45
TRAPPC3-207ENST00000497251 PYDC2Q56P42 97 aa12.25□□□□□ -0.45
TRAPPC3-207ENST00000497251 LEMD1Q68G75 181 aa12.25□□□□□ -0.45
TRAPPC3-207ENST00000497251 CCDC190Q86UF4 302 aa12.25□□□□□ -0.45
TRAPPC3-207ENST00000497251 GLYATL2Q8WU03 294 aa12.25□□□□□ -0.45
TRAPPC3-207ENST00000497251 DNAH10Q8IVF4 4471 aa12.25□□□□□ -0.45
TRAPPC3-207ENST00000497251 TRAV10A0A0B4J240 114 aa12.24□□□□□ -0.45
TRAPPC3-207ENST00000497251 A0A1B0GU03 582 aa12.24□□□□□ -0.45
TRAPPC3-207ENST00000497251 RNASE2P10153 161 aaKnown RBP12.24□□□□□ -0.45
TRAPPC3-207ENST00000497251 ETV6P41212 452 aa12.24□□□□□ -0.45
TRAPPC3-207ENST00000497251 P2RY1P47900 373 aa12.24□□□□□ -0.45
TRAPPC3-207ENST00000497251 NUTF2P61970 127 aaKnown RBP12.24□□□□□ -0.45
TRAPPC3-207ENST00000497251 KLF9Q13886 244 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC3-207ENST00000497251 ZNF79Q15937 498 aa12.24□□□□□ -0.45
TRAPPC3-207ENST00000497251 IZUMO4Q1ZYL8 232 aa12.24□□□□□ -0.45
TRAPPC3-207ENST00000497251 OR52E5Q8NH55 327 aa12.24□□□□□ -0.45
TRAPPC3-207ENST00000497251 RBPMSQ93062 196 aaKnown RBP12.24□□□□□ -0.45
TRAPPC3-207ENST00000497251 TMEM230Q96A57 120 aa12.24□□□□□ -0.45
TRAPPC3-207ENST00000497251 RNF126Q9BV68 326 aa12.24□□□□□ -0.45
TRAPPC3-207ENST00000497251 C1QTNF4Q9BXJ3 329 aa12.24□□□□□ -0.45
TRAPPC3-207ENST00000497251 KRTAP17-1Q9BYP8 105 aa12.24□□□□□ -0.45
TRAPPC3-207ENST00000497251 MCUBQ9NWR8 336 aa12.24□□□□□ -0.45
TRAPPC3-207ENST00000497251 GIG44P09565 113 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC3-207ENST00000497251 OPRK1P41145 380 aa12.23□□□□□ -0.45
TRAPPC3-207ENST00000497251 HTR2BP41595 481 aa12.23□□□□□ -0.45
TRAPPC3-207ENST00000497251 HOXA1P49639 335 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC3-207ENST00000497251 BSXQ3C1V8 233 aa12.23□□□□□ -0.45
TRAPPC3-207ENST00000497251 AARDQ4LEZ3 155 aa12.23□□□□□ -0.45
TRAPPC3-207ENST00000497251 SPANXN2Q5MJ10 180 aa12.23□□□□□ -0.45
TRAPPC3-207ENST00000497251 TOMM5Q8N4H5 51 aa12.23□□□□□ -0.45
TRAPPC3-207ENST00000497251 STXBP6Q8NFX7 210 aa12.23□□□□□ -0.45
TRAPPC3-207ENST00000497251 RNASE11Q8TAA1 199 aaKnown RBP12.23□□□□□ -0.45
TRAPPC3-207ENST00000497251 IL22RA2Q969J5 263 aa12.23□□□□□ -0.45
TRAPPC3-207ENST00000497251 KCNIP3Q9Y2W7 256 aa12.23□□□□□ -0.45
TRAPPC3-207ENST00000497251 AGRNO00468 2067 aa12.23□□□□□ -0.45
TRAPPC3-207ENST00000497251 IGHV4-28A0A0C4DH34 117 aa12.22□□□□□ -0.45
TRAPPC3-207ENST00000497251 A0A0G2JRQ6 117 aa12.22□□□□□ -0.45
TRAPPC3-207ENST00000497251 DEFB4AO15263 64 aa12.22□□□□□ -0.45
TRAPPC3-207ENST00000497251 SLC25A4P12235 298 aa12.22□□□□□ -0.45
TRAPPC3-207ENST00000497251 HLA-DMBP28068 263 aa12.22□□□□□ -0.45
TRAPPC3-207ENST00000497251 SPCS3P61009 180 aa12.22□□□□□ -0.45
TRAPPC3-207ENST00000497251 PRR20EP86478 221 aa12.22□□□□□ -0.45
TRAPPC3-207ENST00000497251 PRR20CP86479 221 aa12.22□□□□□ -0.45
TRAPPC3-207ENST00000497251 PRR20DP86480 221 aa12.22□□□□□ -0.45
TRAPPC3-207ENST00000497251 PRR20BP86481 221 aa12.22□□□□□ -0.45
TRAPPC3-207ENST00000497251 PRR20AP86496 221 aa12.22□□□□□ -0.45
TRAPPC3-207ENST00000497251 NOXA1Q86UR1 476 aa12.22□□□□□ -0.45
TRAPPC3-207ENST00000497251 DCANP1Q8TF63 244 aa12.22□□□□□ -0.45
TRAPPC3-207ENST00000497251 NDUFA13Q9P0J0 144 aa12.22□□□□□ -0.45
TRAPPC3-207ENST00000497251 TBC1D24Q9ULP9 559 aa12.22□□□□□ -0.45
TRAPPC3-207ENST00000497251 TMEM56-RWDD3S4R434 201 aa12.22□□□□□ -0.45
TRAPPC3-207ENST00000497251 U3KQE9 123 aa12.22□□□□□ -0.45
TRAPPC3-207ENST00000497251 DNAH6Q9C0G6 4158 aa12.22□□□□□ -0.45
TRAPPC3-207ENST00000497251 HECTD4Q9Y4D8 3996 aa12.22□□□□□ -0.45
TRAPPC3-207ENST00000497251 IGHV3-66A0A0C4DH42 116 aa12.21□□□□□ -0.45
TRAPPC3-207ENST00000497251 IGKV1-17P01599 117 aa12.21□□□□□ -0.45
TRAPPC3-207ENST00000497251 RBMY1A1P0DJD3 496 aaKnown RBP12.21□□□□□ -0.45
TRAPPC3-207ENST00000497251 RBMY1CP0DJD4 496 aa12.21□□□□□ -0.45
TRAPPC3-207ENST00000497251 YPEL3P61236 119 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC3-207ENST00000497251 SNRPD3P62318 126 aaKnown RBP12.21□□□□□ -0.45
TRAPPC3-207ENST00000497251 RBMY1FQ15415 496 aaKnown RBP12.21□□□□□ -0.45
TRAPPC3-207ENST00000497251 SELENOHQ8IZQ5 122 aaKnown RBP12.21□□□□□ -0.45
TRAPPC3-207ENST00000497251 FAM24BQ8N5W8 94 aa12.21□□□□□ -0.45
TRAPPC3-207ENST00000497251 OR1S2Q8NGQ3 325 aa12.21□□□□□ -0.45
TRAPPC3-207ENST00000497251 LHFPL5Q8TAF8 219 aa12.21□□□□□ -0.45
TRAPPC3-207ENST00000497251 RNASEH2CQ8TDP1 164 aaKnown RBP12.21□□□□□ -0.45
TRAPPC3-207ENST00000497251 Q8WTZ3 238 aa12.21□□□□□ -0.45
TRAPPC3-207ENST00000497251 FNDC4Q9H6D8 234 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC3-207ENST00000497251 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC3-207ENST00000497251 HERC2O95714 4834 aa12.21□□□□□ -0.46
TRAPPC3-207ENST00000497251 VPS13DQ5THJ4 4388 aa12.21□□□□□ -0.46
TRAPPC3-207ENST00000497251 PIGBOS1A0A0B4J2F0 54 aa12.2□□□□□ -0.46
TRAPPC3-207ENST00000497251 SPINK9Q5DT21 86 aa12.2□□□□□ -0.46
TRAPPC3-207ENST00000497251 TMEM268Q5VZI3 342 aa12.2□□□□□ -0.46
TRAPPC3-207ENST00000497251 ETFRF1Q6IPR1 90 aa12.2□□□□□ -0.46
TRAPPC3-207ENST00000497251 CSNK1G2-AS1Q8NCQ2 148 aa12.2□□□□□ -0.46
TRAPPC3-207ENST00000497251 IGHV4-4A0A075B6R2 117 aa12.19□□□□□ -0.46
TRAPPC3-207ENST00000497251 HNRNPCP07910 306 aaKnown RBP eCLIP12.19□□□□□ -0.46
TRAPPC3-207ENST00000497251 ZNF688P0C7X2 276 aa12.19□□□□□ -0.46
TRAPPC3-207ENST00000497251 P0DMU3 169 aa12.19□□□□□ -0.46
TRAPPC3-207ENST00000497251 FAM231AP0DMU4 169 aa12.19□□□□□ -0.46
TRAPPC3-207ENST00000497251 FAM231CP0DMU5 169 aa12.19□□□□□ -0.46
TRAPPC3-207ENST00000497251 ANXA3P12429 323 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms