RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 LEMD1Q68G75 181 aa10.47□□□□□ -0.73
VTI1A-209ENST00000496445 LINC00476Q8WZB0 136 aa10.47□□□□□ -0.73
VTI1A-209ENST00000496445 METTL26Q96S19 204 aa10.47□□□□□ -0.73
VTI1A-209ENST00000496445 RPS10-NUDT3A0A1W2PQS6 291 aa10.46□□□□□ -0.73
VTI1A-209ENST00000496445 MPTX1A8MV57 137 aa10.46□□□□□ -0.73
VTI1A-209ENST00000496445 DNASE2O00115 360 aaPredicted RBP10.46□□□□□ -0.73
VTI1A-209ENST00000496445 NOL3O60936 208 aaKnown RBP10.46□□□□□ -0.73
VTI1A-209ENST00000496445 SULT1A3P0DMM9 295 aa10.46□□□□□ -0.73
VTI1A-209ENST00000496445 SULT1A4P0DMN0 295 aa10.46□□□□□ -0.73
VTI1A-209ENST00000496445 NPPCP23582 126 aa10.46□□□□□ -0.73
VTI1A-209ENST00000496445 P2RY1P47900 373 aa10.46□□□□□ -0.73
VTI1A-209ENST00000496445 RND2P52198 227 aa10.46□□□□□ -0.73
VTI1A-209ENST00000496445 DEFB131AP59861 70 aa10.46□□□□□ -0.73
VTI1A-209ENST00000496445 NMSQ5H8A3 153 aa10.46□□□□□ -0.73
VTI1A-209ENST00000496445 OR1S2Q8NGQ3 325 aa10.46□□□□□ -0.73
VTI1A-209ENST00000496445 MCFD2Q8NI22 146 aa10.46□□□□□ -0.73
VTI1A-209ENST00000496445 RNASEH2CQ8TDP1 164 aaKnown RBP10.46□□□□□ -0.73
VTI1A-209ENST00000496445 TRIM63Q969Q1 353 aa10.46□□□□□ -0.73
VTI1A-209ENST00000496445 TMEM231Q9H6L2 316 aa10.46□□□□□ -0.73
VTI1A-209ENST00000496445 MCUBQ9NWR8 336 aa10.46□□□□□ -0.73
VTI1A-209ENST00000496445 SCP2D1Q9UJQ7 156 aa10.46□□□□□ -0.73
VTI1A-209ENST00000496445 HECTD4Q9Y4D8 3996 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 TRAV30A0A087WSZ9 112 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 A0A1W2PS18 150 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 NUPR2A6NF83 97 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 FABP12A6NFH5 140 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 K7EQG2 157 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 SCGB2A1O75556 95 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 CA1P00915 261 aaPredicted RBP10.45□□□□□ -0.74
VTI1A-209ENST00000496445 SLC25A4P12235 298 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 NPY1RP25929 384 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 OR10J1P30954 320 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 RPL11P62913 178 aaKnown RBP10.45□□□□□ -0.74
VTI1A-209ENST00000496445 PRR20EP86478 221 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 PRR20CP86479 221 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 PRR20DP86480 221 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 PRR20BP86481 221 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 PRR20AP86496 221 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 KLF9Q13886 244 aaPredicted RBP10.45□□□□□ -0.74
VTI1A-209ENST00000496445 RBMS2Q15434 407 aaKnown RBP10.45□□□□□ -0.74
VTI1A-209ENST00000496445 LYZL2Q7Z4W2 148 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 DCANP1Q8TF63 244 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 GATAD1Q8WUU5 269 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 HSPB7Q9UBY9 170 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 RABAC1Q9UI14 185 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 U3KQE9 123 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 V9GYH0 126 aa10.45□□□□□ -0.74
VTI1A-209ENST00000496445 A0A0B4J2A0 478 aa10.44□□□□□ -0.74
VTI1A-209ENST00000496445 AKR1C4P17516 323 aa10.44□□□□□ -0.74
VTI1A-209ENST00000496445 USF2Q15853 346 aaPredicted RBP10.44□□□□□ -0.74
VTI1A-209ENST00000496445 CEMP1Q6PRD7 247 aaPredicted RBP10.44□□□□□ -0.74
VTI1A-209ENST00000496445 STXBP6Q8NFX7 210 aa10.44□□□□□ -0.74
VTI1A-209ENST00000496445 SCGB3A2Q96PL1 93 aa10.44□□□□□ -0.74
VTI1A-209ENST00000496445 RBKSQ9H477 322 aa10.44□□□□□ -0.74
VTI1A-209ENST00000496445 SHPKQ9UHJ6 478 aa10.44□□□□□ -0.74
VTI1A-209ENST00000496445 KCNIP3Q9Y2W7 256 aa10.44□□□□□ -0.74
VTI1A-209ENST00000496445 DNAH2Q9P225 4427 aa10.43□□□□□ -0.74
VTI1A-209ENST00000496445 HNRNPCP07910 306 aaKnown RBP eCLIP10.43□□□□□ -0.74
VTI1A-209ENST00000496445 GIG44P09565 113 aaPredicted RBP10.43□□□□□ -0.74
VTI1A-209ENST00000496445 CCR6P51684 374 aa10.43□□□□□ -0.74
VTI1A-209ENST00000496445 YPEL3P61236 119 aaPredicted RBP10.43□□□□□ -0.74
VTI1A-209ENST00000496445 SMCO1Q147U7 214 aa10.43□□□□□ -0.74
VTI1A-209ENST00000496445 OR11H2Q8NH07 326 aa10.43□□□□□ -0.74
VTI1A-209ENST00000496445 DTD1Q8TEA8 209 aa10.43□□□□□ -0.74
VTI1A-209ENST00000496445 GLMPQ8WWB7 406 aa10.43□□□□□ -0.74
VTI1A-209ENST00000496445 GRAMD2BQ96HH9 432 aa10.43□□□□□ -0.74
VTI1A-209ENST00000496445 RARRES2Q99969 163 aa10.43□□□□□ -0.74
VTI1A-209ENST00000496445 C11orf68Q9H3H3 251 aaKnown RBP10.43□□□□□ -0.74
VTI1A-209ENST00000496445 IL4P05112 153 aa10.42□□□□□ -0.74
VTI1A-209ENST00000496445 ZNF688P0C7X2 276 aa10.42□□□□□ -0.74
VTI1A-209ENST00000496445 ZNF79Q15937 498 aa10.42□□□□□ -0.74
VTI1A-209ENST00000496445 C16orf54Q6UWD8 224 aa10.42□□□□□ -0.74
VTI1A-209ENST00000496445 TRPT1Q86TN4 253 aaKnown RBP10.42□□□□□ -0.74
VTI1A-209ENST00000496445 TMEM217Q8N7C4 229 aa10.42□□□□□ -0.74
VTI1A-209ENST00000496445 Q8WTZ3 238 aa10.42□□□□□ -0.74
VTI1A-209ENST00000496445 NPIPB3Q92617 1050 aa10.42□□□□□ -0.74
VTI1A-209ENST00000496445 ACY3Q96HD9 319 aa10.42□□□□□ -0.74
VTI1A-209ENST00000496445 KNCNA6PVL3 124 aa10.41□□□□□ -0.74
VTI1A-209ENST00000496445 TOMM40O96008 361 aa10.41□□□□□ -0.74
VTI1A-209ENST00000496445 IFNA10P01566 189 aa10.41□□□□□ -0.74
VTI1A-209ENST00000496445 ANXA3P12429 323 aa10.41□□□□□ -0.74
VTI1A-209ENST00000496445 C4BPBP20851 252 aa10.41□□□□□ -0.74
VTI1A-209ENST00000496445 SRPXP78539 464 aa10.41□□□□□ -0.74
VTI1A-209ENST00000496445 PYDC2Q56P42 97 aa10.41□□□□□ -0.74
VTI1A-209ENST00000496445 ETFRF1Q6IPR1 90 aa10.41□□□□□ -0.74
VTI1A-209ENST00000496445 STHQ8IWL8 128 aa10.41□□□□□ -0.74
VTI1A-209ENST00000496445 LGI3Q8N145 548 aa10.41□□□□□ -0.74
VTI1A-209ENST00000496445 NARS2Q96I59 477 aaKnown RBP10.41□□□□□ -0.74
VTI1A-209ENST00000496445 RBM38Q9H0Z9 239 aaKnown RBP10.41□□□□□ -0.74
VTI1A-209ENST00000496445 CACFD1Q9UGQ2 172 aa10.41□□□□□ -0.74
VTI1A-209ENST00000496445 U3KQ87 197 aa10.41□□□□□ -0.74
VTI1A-209ENST00000496445 LCE2BO14633 110 aa10.4□□□□□ -0.74
VTI1A-209ENST00000496445 PITX3O75364 302 aa10.4□□□□□ -0.74
VTI1A-209ENST00000496445 LY6G6CO95867 125 aa10.4□□□□□ -0.74
VTI1A-209ENST00000496445 NANOS2P60321 138 aaKnown RBP10.4□□□□□ -0.74
VTI1A-209ENST00000496445 TMED4Q7Z7H5 227 aa10.4□□□□□ -0.74
VTI1A-209ENST00000496445 CCDC190Q86UF4 302 aa10.4□□□□□ -0.74
VTI1A-209ENST00000496445 NOXA1Q86UR1 476 aa10.4□□□□□ -0.74
VTI1A-209ENST00000496445 TOMM5Q8N4H5 51 aa10.4□□□□□ -0.74
VTI1A-209ENST00000496445 PHLDA1Q8WV24 401 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms