RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 TCTAP57738 103 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 TAS2R19P59542 299 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 DHRS2Q13268 280 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 MEF2DQ14814 521 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 AARDQ4LEZ3 155 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 PSMG4Q5JS54 123 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 STEAP1BQ6NZ63 245 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 PRSS54Q6PEW0 395 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 ZNF767PQ75MW2 155 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 CSNK1G2-AS1Q8NCQ2 148 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 TMEM170AQ8WVE7 144 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 GLMPQ8WWB7 406 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 AP3S1Q92572 193 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 NARS2Q96I59 477 aaKnown RBP9.42□□□□□ -0.9
USF1-207ENST00000496363 RTBDNQ9BSG5 229 aaPredicted RBP9.42□□□□□ -0.9
USF1-207ENST00000496363 TMEM222Q9H0R3 208 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 HEYLQ9NQ87 328 aaPredicted RBP9.42□□□□□ -0.9
USF1-207ENST00000496363 CACNG5Q9UF02 275 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 CELA1Q9UNI1 258 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 RYR1P21817 5038 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 PCLOQ9Y6V0 5065 aa9.42□□□□□ -0.9
USF1-207ENST00000496363 TRAV30A0A087WSZ9 112 aa9.41□□□□□ -0.9
USF1-207ENST00000496363 RPS10-NUDT3A0A1W2PQS6 291 aa9.41□□□□□ -0.9
USF1-207ENST00000496363 C11orf94C9JXX5 98 aa9.41□□□□□ -0.9
USF1-207ENST00000496363 SCGB2A1O75556 95 aa9.41□□□□□ -0.9
USF1-207ENST00000496363 GABARAPO95166 117 aa9.41□□□□□ -0.9
USF1-207ENST00000496363 CDS2O95674 445 aa9.41□□□□□ -0.9
USF1-207ENST00000496363 HNRNPCP07910 306 aaKnown RBP eCLIP9.41□□□□□ -0.9
USF1-207ENST00000496363 OR10J1P30954 320 aa9.41□□□□□ -0.9
USF1-207ENST00000496363 HTR2BP41595 481 aa9.41□□□□□ -0.9
USF1-207ENST00000496363 DHODHQ02127 395 aa9.41□□□□□ -0.9
USF1-207ENST00000496363 USF2Q15853 346 aaPredicted RBP9.41□□□□□ -0.9
USF1-207ENST00000496363 TMEM41BQ5BJD5 291 aa9.41□□□□□ -0.9
USF1-207ENST00000496363 C16orf54Q6UWD8 224 aa9.41□□□□□ -0.9
USF1-207ENST00000496363 SELENOHQ8IZQ5 122 aaKnown RBP9.41□□□□□ -0.9
USF1-207ENST00000496363 OR1S2Q8NGQ3 325 aa9.41□□□□□ -0.9
USF1-207ENST00000496363 GLYATL2Q8WU03 294 aa9.41□□□□□ -0.9
USF1-207ENST00000496363 GPR146Q96CH1 333 aa9.41□□□□□ -0.9
USF1-207ENST00000496363 RAB40CQ96S21 281 aa9.41□□□□□ -0.9
USF1-207ENST00000496363 MIXL1Q9H2W2 232 aa9.41□□□□□ -0.9
USF1-207ENST00000496363 NAA60Q9H7X0 242 aa9.41□□□□□ -0.9
USF1-207ENST00000496363 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.41□□□□□ -0.9
USF1-207ENST00000496363 TBC1D24Q9ULP9 559 aa9.41□□□□□ -0.9
USF1-207ENST00000496363 IGHV4-4A0A075B6R2 117 aa9.4□□□□□ -0.9
USF1-207ENST00000496363 TRAV10A0A0B4J240 114 aa9.4□□□□□ -0.9
USF1-207ENST00000496363 TEX13DA0A0J9YY54 714 aaPredicted RBP9.4□□□□□ -0.9
USF1-207ENST00000496363 HELTA6NFD8 242 aa9.4□□□□□ -0.9
USF1-207ENST00000496363 CEBPZOSA8MTT3 80 aa9.4□□□□□ -0.9
USF1-207ENST00000496363 SMIM18P0DKX4 95 aa9.4□□□□□ -0.9
USF1-207ENST00000496363 C2orf83Q53S99 150 aa9.4□□□□□ -0.9
USF1-207ENST00000496363 FAM219AQ8IW50 185 aa9.4□□□□□ -0.9
USF1-207ENST00000496363 SLC24A4Q8NFF2 622 aa9.4□□□□□ -0.9
USF1-207ENST00000496363 OR52E5Q8NH55 327 aa9.4□□□□□ -0.9
USF1-207ENST00000496363 Q8WTZ3 238 aa9.4□□□□□ -0.9
USF1-207ENST00000496363 RBPMSQ93062 196 aaKnown RBP9.4□□□□□ -0.9
USF1-207ENST00000496363 PRR13Q9NZ81 148 aa9.4□□□□□ -0.9
USF1-207ENST00000496363 C14orf166Q9Y224 244 aaKnown RBP9.4□□□□□ -0.9
USF1-207ENST00000496363 FAM90A26D6RGX4 464 aa9.39□□□□□ -0.91
USF1-207ENST00000496363 GABARAPH6UMI1 98 aa9.39□□□□□ -0.91
USF1-207ENST00000496363 B3GALNT1O75752 331 aa9.39□□□□□ -0.91
USF1-207ENST00000496363 IL4P05112 153 aa9.39□□□□□ -0.91
USF1-207ENST00000496363 EIF2B2P49770 351 aaKnown RBP9.39□□□□□ -0.91
USF1-207ENST00000496363 YPEL3P61236 119 aaPredicted RBP9.39□□□□□ -0.91
USF1-207ENST00000496363 GPR107Q5VW38 600 aa9.39□□□□□ -0.91
USF1-207ENST00000496363 TMEM268Q5VZI3 342 aa9.39□□□□□ -0.91
USF1-207ENST00000496363 RNASEH2CQ8TDP1 164 aaKnown RBP9.39□□□□□ -0.91
USF1-207ENST00000496363 ACY3Q96HD9 319 aa9.39□□□□□ -0.91
USF1-207ENST00000496363 SCRT1Q9BWW7 348 aa9.39□□□□□ -0.91
USF1-207ENST00000496363 SLC25A4P12235 298 aa9.38□□□□□ -0.91
USF1-207ENST00000496363 NPY1RP25929 384 aa9.38□□□□□ -0.91
USF1-207ENST00000496363 DEFB1P60022 68 aa9.38□□□□□ -0.91
USF1-207ENST00000496363 C12orf74Q32Q52 190 aa9.38□□□□□ -0.91
USF1-207ENST00000496363 OR4C16Q8NGL9 310 aa9.38□□□□□ -0.91
USF1-207ENST00000496363 C15orf40Q8WUR7 153 aa9.38□□□□□ -0.91
USF1-207ENST00000496363 NPIPB3Q92617 1050 aa9.38□□□□□ -0.91
USF1-207ENST00000496363 XCL2Q9UBD3 114 aa9.38□□□□□ -0.91
USF1-207ENST00000496363 CRYM-AS1A6NIL9 109 aa9.37□□□□□ -0.91
USF1-207ENST00000496363 DISC1C4P0D8 188 aa9.37□□□□□ -0.91
USF1-207ENST00000496363 CTDSP2O14595 271 aa9.37□□□□□ -0.91
USF1-207ENST00000496363 RGS5O15539 181 aa9.37□□□□□ -0.91
USF1-207ENST00000496363 TOMM40O96008 361 aa9.37□□□□□ -0.91
USF1-207ENST00000496363 GSG1LQ6UXU4 331 aa9.37□□□□□ -0.91
USF1-207ENST00000496363 SIGLEC15Q6ZMC9 328 aa9.37□□□□□ -0.91
USF1-207ENST00000496363 NRN1Q9NPD7 142 aa9.37□□□□□ -0.91
USF1-207ENST00000496363 GPR132Q9UNW8 380 aa9.37□□□□□ -0.91
USF1-207ENST00000496363 DEFB131BA0A096LNP1 70 aa9.36□□□□□ -0.91
USF1-207ENST00000496363 H3BMM0 161 aa9.36□□□□□ -0.91
USF1-207ENST00000496363 BUB3O43684 328 aa9.36□□□□□ -0.91
USF1-207ENST00000496363 RD3LP0DJH9 198 aa9.36□□□□□ -0.91
USF1-207ENST00000496363 PSG1P11464 419 aa9.36□□□□□ -0.91
USF1-207ENST00000496363 AP2S1P53680 142 aaPredicted RBP9.36□□□□□ -0.91
USF1-207ENST00000496363 SNRPD3P62318 126 aaKnown RBP9.36□□□□□ -0.91
USF1-207ENST00000496363 SSBP1Q04837 148 aaKnown RBP9.36□□□□□ -0.91
USF1-207ENST00000496363 SPCS2Q15005 226 aa9.36□□□□□ -0.91
USF1-207ENST00000496363 SURF2Q15527 256 aaPredicted RBP9.36□□□□□ -0.91
USF1-207ENST00000496363 NMSQ5H8A3 153 aa9.36□□□□□ -0.91
USF1-207ENST00000496363 GDF5OSQ5U4N7 250 aa9.36□□□□□ -0.91
USF1-207ENST00000496363 CENPSQ8N2Z9 138 aa9.36□□□□□ -0.91
USF1-207ENST00000496363 OR51G1Q8NGK1 321 aa9.36□□□□□ -0.91
USF1-207ENST00000496363 SMIM4Q8WVI0 70 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms