RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 SLC25A6P12236 298 aa13.4□□□□□ -0.26
COL20A1-207ENST00000494913 ANXA7P20073 488 aaKnown RBP13.4□□□□□ -0.26
COL20A1-207ENST00000494913 TNFRSF9Q07011 255 aa13.4□□□□□ -0.26
COL20A1-207ENST00000494913 DHRS2Q13268 280 aa13.4□□□□□ -0.26
COL20A1-207ENST00000494913 FAM110AQ9BQ89 295 aa13.4□□□□□ -0.26
COL20A1-207ENST00000494913 EDA2RQ9HAV5 297 aa13.4□□□□□ -0.26
COL20A1-207ENST00000494913 IGKV3-7A0A075B6H7 116 aa13.39□□□□□ -0.27
COL20A1-207ENST00000494913 LOC102724200A0A096LPH7 203 aaPredicted RBP13.39□□□□□ -0.27
COL20A1-207ENST00000494913 HOXB5P09067 269 aa13.39□□□□□ -0.27
COL20A1-207ENST00000494913 LYL1P12980 280 aa13.39□□□□□ -0.27
COL20A1-207ENST00000494913 ASAH1Q13510 395 aa13.39□□□□□ -0.27
COL20A1-207ENST00000494913 ENKURQ8TC29 256 aa13.39□□□□□ -0.27
COL20A1-207ENST00000494913 RNASEH2CQ8TDP1 164 aaKnown RBP13.39□□□□□ -0.27
COL20A1-207ENST00000494913 TMEM170AQ8WVE7 144 aa13.39□□□□□ -0.27
COL20A1-207ENST00000494913 GGTLC1Q9BX51 225 aa13.39□□□□□ -0.27
COL20A1-207ENST00000494913 ZFAND3Q9H8U3 227 aa13.39□□□□□ -0.27
COL20A1-207ENST00000494913 NUDT15Q9NV35 164 aa13.39□□□□□ -0.27
COL20A1-207ENST00000494913 HSPB7Q9UBY9 170 aa13.39□□□□□ -0.27
COL20A1-207ENST00000494913 MED6O75586 246 aa13.38□□□□□ -0.27
COL20A1-207ENST00000494913 APOHP02749 345 aaPredicted RBP13.38□□□□□ -0.27
COL20A1-207ENST00000494913 NPY1RP25929 384 aa13.38□□□□□ -0.27
COL20A1-207ENST00000494913 BMI1P35226 326 aa13.38□□□□□ -0.27
COL20A1-207ENST00000494913 TFPI2P48307 235 aa13.38□□□□□ -0.27
COL20A1-207ENST00000494913 DEFA1P59665 94 aa13.38□□□□□ -0.27
COL20A1-207ENST00000494913 DEFA3P59666 94 aa13.38□□□□□ -0.27
COL20A1-207ENST00000494913 ODF3L2Q3SX64 289 aa13.38□□□□□ -0.27
COL20A1-207ENST00000494913 TIGITQ495A1 244 aa13.38□□□□□ -0.27
COL20A1-207ENST00000494913 CASC10Q5T4H9 136 aa13.38□□□□□ -0.27
COL20A1-207ENST00000494913 PRSS54Q6PEW0 395 aa13.38□□□□□ -0.27
COL20A1-207ENST00000494913 DTD1Q8TEA8 209 aa13.38□□□□□ -0.27
COL20A1-207ENST00000494913 ST8SIA2Q92186 375 aa13.38□□□□□ -0.27
COL20A1-207ENST00000494913 RBKSQ9H477 322 aa13.38□□□□□ -0.27
COL20A1-207ENST00000494913 TRAV6A0A075B6T7 132 aa13.37□□□□□ -0.27
COL20A1-207ENST00000494913 TRAV30A0A087WSZ9 112 aa13.37□□□□□ -0.27
COL20A1-207ENST00000494913 IGHV3-66A0A0C4DH42 116 aa13.37□□□□□ -0.27
COL20A1-207ENST00000494913 FAM90A26D6RGX4 464 aa13.37□□□□□ -0.27
COL20A1-207ENST00000494913 IFNA10P01566 189 aa13.37□□□□□ -0.27
COL20A1-207ENST00000494913 IGKV1-17P01599 117 aa13.37□□□□□ -0.27
COL20A1-207ENST00000494913 SLC25A4P12235 298 aa13.37□□□□□ -0.27
COL20A1-207ENST00000494913 RND2P52198 227 aa13.37□□□□□ -0.27
COL20A1-207ENST00000494913 TCF24Q7RTU0 167 aa13.37□□□□□ -0.27
COL20A1-207ENST00000494913 LILRB2Q8N423 598 aa13.37□□□□□ -0.27
COL20A1-207ENST00000494913 GBGT1Q8N5D6 347 aa13.37□□□□□ -0.27
COL20A1-207ENST00000494913 U3KQ87 197 aa13.37□□□□□ -0.27
COL20A1-207ENST00000494913 H2AFB2P0C5Z0 115 aa13.36□□□□□ -0.27
COL20A1-207ENST00000494913 NPPCP23582 126 aa13.36□□□□□ -0.27
COL20A1-207ENST00000494913 ATP5IP56385 69 aaPredicted RBP13.36□□□□□ -0.27
COL20A1-207ENST00000494913 GGNBP1Q5YKI7 109 aa13.36□□□□□ -0.27
COL20A1-207ENST00000494913 FAM90A2PQ658T7 463 aa13.36□□□□□ -0.27
COL20A1-207ENST00000494913 VSIRQ9H7M9 311 aa13.36□□□□□ -0.27
COL20A1-207ENST00000494913 DFFBO76075 338 aa13.36□□□□□ -0.27
COL20A1-207ENST00000494913 CD5P06127 495 aa13.36□□□□□ -0.27
COL20A1-207ENST00000494913 RPP30P78346 268 aaKnown RBP13.36□□□□□ -0.27
COL20A1-207ENST00000494913 ETFRF1Q6IPR1 90 aa13.36□□□□□ -0.27
COL20A1-207ENST00000494913 CIB3Q96Q77 187 aaPredicted RBP13.36□□□□□ -0.27
COL20A1-207ENST00000494913 TBC1D24Q9ULP9 559 aa13.36□□□□□ -0.27
COL20A1-207ENST00000494913 IGLC1P0CG04 106 aa13.35□□□□□ -0.27
COL20A1-207ENST00000494913 OR10J1P30954 320 aa13.35□□□□□ -0.27
COL20A1-207ENST00000494913 RPL11P62913 178 aaKnown RBP13.35□□□□□ -0.27
COL20A1-207ENST00000494913 PAFAH1B2P68402 229 aa13.35□□□□□ -0.27
COL20A1-207ENST00000494913 ZFAND6Q6FIF0 208 aa13.35□□□□□ -0.27
COL20A1-207ENST00000494913 WFDC3Q8IUB2 231 aa13.35□□□□□ -0.27
COL20A1-207ENST00000494913 OR1S2Q8NGQ3 325 aa13.35□□□□□ -0.27
COL20A1-207ENST00000494913 MITD1Q8WV92 249 aa13.35□□□□□ -0.27
COL20A1-207ENST00000494913 NPIPB3Q92617 1050 aa13.35□□□□□ -0.27
COL20A1-207ENST00000494913 METTL26Q96S19 204 aa13.35□□□□□ -0.27
COL20A1-207ENST00000494913 WRBO00258 174 aa13.34□□□□□ -0.27
COL20A1-207ENST00000494913 PITX3O75364 302 aa13.34□□□□□ -0.27
COL20A1-207ENST00000494913 IFNA4P05014 189 aa13.34□□□□□ -0.27
COL20A1-207ENST00000494913 APRG1Q8IVJ8 170 aa13.34□□□□□ -0.27
COL20A1-207ENST00000494913 ACY3Q96HD9 319 aa13.34□□□□□ -0.27
COL20A1-207ENST00000494913 TMEM231Q9H6L2 316 aa13.34□□□□□ -0.27
COL20A1-207ENST00000494913 A0A1W2PS18 150 aa13.33□□□□□ -0.28
COL20A1-207ENST00000494913 DNASE2O00115 360 aaPredicted RBP13.33□□□□□ -0.28
COL20A1-207ENST00000494913 ADAP1O75689 374 aa13.33□□□□□ -0.28
COL20A1-207ENST00000494913 CRYBB3P26998 211 aa13.33□□□□□ -0.28
COL20A1-207ENST00000494913 APOC4P55056 127 aa13.33□□□□□ -0.28
COL20A1-207ENST00000494913 CMC4P56277 68 aaPredicted RBP13.33□□□□□ -0.28
COL20A1-207ENST00000494913 RAB11AP62491 216 aa13.33□□□□□ -0.28
COL20A1-207ENST00000494913 IFITM3Q01628 133 aa13.33□□□□□ -0.28
COL20A1-207ENST00000494913 Q8WTZ3 238 aa13.33□□□□□ -0.28
COL20A1-207ENST00000494913 OVOL2Q9BRP0 275 aa13.33□□□□□ -0.28
COL20A1-207ENST00000494913 MS4A6AQ9H2W1 248 aa13.33□□□□□ -0.28
COL20A1-207ENST00000494913 GPN1Q9HCN4 374 aaPredicted RBP13.33□□□□□ -0.28
COL20A1-207ENST00000494913 RYR3Q15413 4870 aa13.32□□□□□ -0.28
COL20A1-207ENST00000494913 RPL35AP18077 110 aaKnown RBP13.32□□□□□ -0.28
COL20A1-207ENST00000494913 YPEL3P61236 119 aaPredicted RBP13.32□□□□□ -0.28
COL20A1-207ENST00000494913 ZNF431Q8TF32 576 aaPredicted RBP13.32□□□□□ -0.28
COL20A1-207ENST00000494913 SYNGR2O43760 224 aa13.31□□□□□ -0.28
COL20A1-207ENST00000494913 IAPPP10997 89 aa13.31□□□□□ -0.28
COL20A1-207ENST00000494913 ZNF124Q15973 351 aa13.31□□□□□ -0.28
COL20A1-207ENST00000494913 NARS2Q96I59 477 aaKnown RBP13.31□□□□□ -0.28
COL20A1-207ENST00000494913 PAIP2BQ9ULR5 123 aaKnown RBP13.31□□□□□ -0.28
COL20A1-207ENST00000494913 RD3LP0DJH9 198 aa13.3□□□□□ -0.28
COL20A1-207ENST00000494913 NKX2-1P43699 371 aaPredicted RBP13.3□□□□□ -0.28
COL20A1-207ENST00000494913 P2RY1P47900 373 aa13.3□□□□□ -0.28
COL20A1-207ENST00000494913 IAH1Q2TAA2 248 aaPredicted RBP13.3□□□□□ -0.28
COL20A1-207ENST00000494913 STPG3Q8N7X2 389 aa13.3□□□□□ -0.28
COL20A1-207ENST00000494913 MAGT1Q9H0U3 335 aa13.3□□□□□ -0.28
COL20A1-207ENST00000494913 MAP6D1Q9H9H5 199 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms