RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ACTL10Q5JWF8 245 aa16.85■□□□□ 0.29
COL27A1-208ENST00000494780 RNASEH2CQ8TDP1 164 aaKnown RBP16.85■□□□□ 0.29
COL27A1-208ENST00000494780 Q8WTZ3 238 aa16.85■□□□□ 0.29
COL27A1-208ENST00000494780 NAA50Q9GZZ1 169 aaKnown RBP16.85■□□□□ 0.29
COL27A1-208ENST00000494780 HEYLQ9NQ87 328 aaPredicted RBP16.85■□□□□ 0.29
COL27A1-208ENST00000494780 C14orf166Q9Y224 244 aaKnown RBP16.85■□□□□ 0.29
COL27A1-208ENST00000494780 AGRNO00468 2067 aa16.85■□□□□ 0.29
COL27A1-208ENST00000494780 GABARAPH6UMI1 98 aa16.84■□□□□ 0.29
COL27A1-208ENST00000494780 HNRNPCP07910 306 aaKnown RBP eCLIP16.84■□□□□ 0.29
COL27A1-208ENST00000494780 HLA-DMBP28068 263 aa16.84■□□□□ 0.29
COL27A1-208ENST00000494780 AP2S1P53680 142 aaPredicted RBP16.84■□□□□ 0.29
COL27A1-208ENST00000494780 YPEL3P61236 119 aaPredicted RBP16.84■□□□□ 0.29
COL27A1-208ENST00000494780 SSBP1Q04837 148 aaKnown RBP16.84■□□□□ 0.29
COL27A1-208ENST00000494780 DHRS2Q13268 280 aa16.84■□□□□ 0.29
COL27A1-208ENST00000494780 PRSS54Q6PEW0 395 aa16.84■□□□□ 0.29
COL27A1-208ENST00000494780 C16orf54Q6UWD8 224 aa16.84■□□□□ 0.29
COL27A1-208ENST00000494780 GLYATL2Q8WU03 294 aa16.84■□□□□ 0.29
COL27A1-208ENST00000494780 RBPMSQ93062 196 aaKnown RBP16.84■□□□□ 0.29
COL27A1-208ENST00000494780 X6R8D5 127 aa16.84■□□□□ 0.29
COL27A1-208ENST00000494780 TEX13DA0A0J9YY54 714 aaPredicted RBP16.83■□□□□ 0.28
COL27A1-208ENST00000494780 RND2P52198 227 aa16.83■□□□□ 0.28
COL27A1-208ENST00000494780 DHODHQ02127 395 aa16.83■□□□□ 0.28
COL27A1-208ENST00000494780 MEF2DQ14814 521 aa16.83■□□□□ 0.28
COL27A1-208ENST00000494780 SURF2Q15527 256 aaPredicted RBP16.83■□□□□ 0.28
COL27A1-208ENST00000494780 SELENOHQ8IZQ5 122 aaKnown RBP16.83■□□□□ 0.28
COL27A1-208ENST00000494780 CENPSQ8N2Z9 138 aa16.83■□□□□ 0.28
COL27A1-208ENST00000494780 CSNK1G2-AS1Q8NCQ2 148 aa16.83■□□□□ 0.28
COL27A1-208ENST00000494780 LHFPL5Q8TAF8 219 aa16.83■□□□□ 0.28
COL27A1-208ENST00000494780 GLMPQ8WWB7 406 aa16.83■□□□□ 0.28
COL27A1-208ENST00000494780 RTBDNQ9BSG5 229 aaPredicted RBP16.83■□□□□ 0.28
COL27A1-208ENST00000494780 NAA60Q9H7X0 242 aa16.83■□□□□ 0.28
COL27A1-208ENST00000494780 CACNG5Q9UF02 275 aa16.83■□□□□ 0.28
COL27A1-208ENST00000494780 TBC1D24Q9ULP9 559 aa16.83■□□□□ 0.28
COL27A1-208ENST00000494780 TRAV10A0A0B4J240 114 aa16.82■□□□□ 0.28
COL27A1-208ENST00000494780 OR10J1P30954 320 aa16.82■□□□□ 0.28
COL27A1-208ENST00000494780 MRPS10P82664 201 aaKnown RBP16.82■□□□□ 0.28
COL27A1-208ENST00000494780 SLC24A4Q8NFF2 622 aa16.82■□□□□ 0.28
COL27A1-208ENST00000494780 GPR146Q96CH1 333 aa16.82■□□□□ 0.28
COL27A1-208ENST00000494780 RAB40CQ96S21 281 aa16.82■□□□□ 0.28
COL27A1-208ENST00000494780 ELOA3CA0A087WX78 387 aaPredicted RBP16.81■□□□□ 0.28
COL27A1-208ENST00000494780 PSMG4Q5JS54 123 aa16.81■□□□□ 0.28
COL27A1-208ENST00000494780 ETFRF1Q6IPR1 90 aa16.81■□□□□ 0.28
COL27A1-208ENST00000494780 Q6ZTC4 211 aa16.81■□□□□ 0.28
COL27A1-208ENST00000494780 KRTAP17-1Q9BYP8 105 aa16.81■□□□□ 0.28
COL27A1-208ENST00000494780 CLEC5AQ9NY25 188 aa16.81■□□□□ 0.28
COL27A1-208ENST00000494780 CEBPZOSA8MTT3 80 aa16.8■□□□□ 0.28
COL27A1-208ENST00000494780 DISC1C4P0D8 188 aa16.8■□□□□ 0.28
COL27A1-208ENST00000494780 GPR107Q5VW38 600 aa16.8■□□□□ 0.28
COL27A1-208ENST00000494780 FAAP20Q6NZ36 180 aa16.8■□□□□ 0.28
COL27A1-208ENST00000494780 MIXL1Q9H2W2 232 aa16.8■□□□□ 0.28
COL27A1-208ENST00000494780 SEPSECSQ9HD40 501 aaKnown RBP16.8■□□□□ 0.28
COL27A1-208ENST00000494780 CACFD1Q9UGQ2 172 aa16.8■□□□□ 0.28
COL27A1-208ENST00000494780 SNRPD3P62318 126 aaKnown RBP16.79■□□□□ 0.28
COL27A1-208ENST00000494780 TMEM268Q5VZI3 342 aa16.79■□□□□ 0.28
COL27A1-208ENST00000494780 NOXA1Q86UR1 476 aa16.79■□□□□ 0.28
COL27A1-208ENST00000494780 C1QTNF4Q9BXJ3 329 aa16.79■□□□□ 0.28
COL27A1-208ENST00000494780 GPR132Q9UNW8 380 aa16.79■□□□□ 0.28
COL27A1-208ENST00000494780 VPS13DQ5THJ4 4388 aa16.78■□□□□ 0.28
COL27A1-208ENST00000494780 IGHV4-4A0A075B6R2 117 aa16.78■□□□□ 0.28
COL27A1-208ENST00000494780 CRYM-AS1A6NIL9 109 aa16.78■□□□□ 0.28
COL27A1-208ENST00000494780 FAM90A26D6RGX4 464 aa16.78■□□□□ 0.28
COL27A1-208ENST00000494780 IL4P05112 153 aa16.78■□□□□ 0.28
COL27A1-208ENST00000494780 NPY1RP25929 384 aa16.78■□□□□ 0.28
COL27A1-208ENST00000494780 NUTF2P61970 127 aaKnown RBP16.78■□□□□ 0.28
COL27A1-208ENST00000494780 USF2Q15853 346 aaPredicted RBP16.78■□□□□ 0.28
COL27A1-208ENST00000494780 TMEM170AQ8WVE7 144 aa16.78■□□□□ 0.28
COL27A1-208ENST00000494780 TMEM56-RWDD3S4R434 201 aa16.78■□□□□ 0.28
COL27A1-208ENST00000494780 RGS5O15539 181 aa16.77■□□□□ 0.28
COL27A1-208ENST00000494780 GSTZ1O43708 216 aaPredicted RBP16.77■□□□□ 0.28
COL27A1-208ENST00000494780 TOMM40O96008 361 aa16.77■□□□□ 0.28
COL27A1-208ENST00000494780 SMIM4Q8WVI0 70 aa16.77■□□□□ 0.28
COL27A1-208ENST00000494780 NPIPB3Q92617 1050 aa16.77■□□□□ 0.28
COL27A1-208ENST00000494780 RNF126Q9BV68 326 aa16.77■□□□□ 0.28
COL27A1-208ENST00000494780 NRN1Q9NPD7 142 aa16.77■□□□□ 0.28
COL27A1-208ENST00000494780 BUB3O43684 328 aa16.76■□□□□ 0.27
COL27A1-208ENST00000494780 AKAIN1P0CW23 69 aa16.76■□□□□ 0.27
COL27A1-208ENST00000494780 RD3LP0DJH9 198 aa16.76■□□□□ 0.27
COL27A1-208ENST00000494780 SMIM18P0DKX4 95 aa16.76■□□□□ 0.27
COL27A1-208ENST00000494780 SIGLEC15Q6ZMC9 328 aa16.76■□□□□ 0.27
COL27A1-208ENST00000494780 IL22RA2Q969J5 263 aa16.76■□□□□ 0.27
COL27A1-208ENST00000494780 HECTD4Q9Y4D8 3996 aa16.75■□□□□ 0.27
COL27A1-208ENST00000494780 NXPH3O95157 252 aa16.75■□□□□ 0.27
COL27A1-208ENST00000494780 SULT1A3P0DMM9 295 aa16.75■□□□□ 0.27
COL27A1-208ENST00000494780 SULT1A4P0DMN0 295 aa16.75■□□□□ 0.27
COL27A1-208ENST00000494780 NMSQ5H8A3 153 aa16.75■□□□□ 0.27
COL27A1-208ENST00000494780 OR4C16Q8NGL9 310 aa16.75■□□□□ 0.27
COL27A1-208ENST00000494780 ACY3Q96HD9 319 aa16.75■□□□□ 0.27
COL27A1-208ENST00000494780 PRRT1Q99946 306 aa16.75■□□□□ 0.27
COL27A1-208ENST00000494780 HERC2O95714 4834 aa16.75■□□□□ 0.27
COL27A1-208ENST00000494780 DNAH6Q9C0G6 4158 aa16.74■□□□□ 0.27
COL27A1-208ENST00000494780 H3BMM0 161 aa16.74■□□□□ 0.27
COL27A1-208ENST00000494780 CTDSP2O14595 271 aa16.74■□□□□ 0.27
COL27A1-208ENST00000494780 C12orf74Q32Q52 190 aa16.74■□□□□ 0.27
COL27A1-208ENST00000494780 CELA1Q9UNI1 258 aa16.74■□□□□ 0.27
COL27A1-208ENST00000494780 KCNIP3Q9Y2W7 256 aa16.74■□□□□ 0.27
COL27A1-208ENST00000494780 CTDSPLO15194 276 aa16.73■□□□□ 0.27
COL27A1-208ENST00000494780 IFNA10P01566 189 aa16.73■□□□□ 0.27
COL27A1-208ENST00000494780 AMBPP02760 352 aa16.73■□□□□ 0.27
COL27A1-208ENST00000494780 PSG1P11464 419 aa16.73■□□□□ 0.27
COL27A1-208ENST00000494780 XCL2Q9UBD3 114 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms