RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 FAM210BQ96KR6 192 aa4.84□□□□□ -1.63
FN1-225ENST00000494446 SCGB3A2Q96PL1 93 aa4.84□□□□□ -1.63
FN1-225ENST00000494446 FANCD2OSQ96PS1 177 aa4.84□□□□□ -1.63
FN1-225ENST00000494446 C20orf24Q9BUV8 137 aa4.84□□□□□ -1.63
FN1-225ENST00000494446 ZNF430Q9H8G1 570 aaPredicted RBP4.84□□□□□ -1.63
FN1-225ENST00000494446 CHMP1AQ9HD42 196 aaPredicted RBP4.84□□□□□ -1.63
FN1-225ENST00000494446 DAZ1Q9NQZ3 744 aaKnown RBP4.84□□□□□ -1.63
FN1-225ENST00000494446 CLEC5AQ9NY25 188 aa4.84□□□□□ -1.63
FN1-225ENST00000494446 U3KQ87 197 aa4.84□□□□□ -1.63
FN1-225ENST00000494446 TRAV14DV4A0A0A6YYC5 116 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 RPS10-NUDT3A0A1W2PQS6 291 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 NPIPB5A8MRT5 1133 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 L7N2F9 121 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 TGOLN2O43493 480 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 PDCD6O75340 191 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 SIX6O95475 246 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 FCGR3AP08637 254 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 GIG44P09565 113 aaPredicted RBP4.83□□□□□ -1.64
FN1-225ENST00000494446 SLC25A4P12235 298 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 DEFA4P12838 97 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 NFYAP23511 347 aaPredicted RBP4.83□□□□□ -1.64
FN1-225ENST00000494446 FUSP35637 526 aaKnown RBP eCLIP4.83□□□□□ -1.64
FN1-225ENST00000494446 HTR2BP41595 481 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 FAM3BP58499 235 aaPredicted RBP4.83□□□□□ -1.64
FN1-225ENST00000494446 DEFB131AP59861 70 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 UBE2KP61086 200 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 DLK1P80370 383 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 FGL1Q08830 312 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 ZNF345Q14585 488 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 OPCMLQ14982 345 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 TMEM128Q5BJH2 165 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 MORN3Q6PF18 240 aaPredicted RBP4.83□□□□□ -1.64
FN1-225ENST00000494446 Q6ZS49 121 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 Q6ZSN1 163 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 ZNF680Q8NEM1 530 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 CXorf58Q96LI9 332 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 RNF2Q99496 336 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 FAAP24Q9BTP7 215 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 TMEM14BQ9NUH8 114 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 PLEKHJ1Q9NW61 149 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 EHFQ9NZC4 300 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 AK3Q9UIJ7 227 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 ANXA10Q9UJ72 324 aa4.83□□□□□ -1.64
FN1-225ENST00000494446 IGKV1D-8A0A087WSZ0 117 aa4.82□□□□□ -1.64
FN1-225ENST00000494446 IGHV3-49A0A0A0MS15 119 aa4.82□□□□□ -1.64
FN1-225ENST00000494446 LINC00862A6NCI5 91 aa4.82□□□□□ -1.64
FN1-225ENST00000494446 KRTAP29-1A8MX34 341 aaPredicted RBP4.82□□□□□ -1.64
FN1-225ENST00000494446 TEX22C9J3V5 150 aa4.82□□□□□ -1.64
FN1-225ENST00000494446 SFT2D2O95562 160 aa4.82□□□□□ -1.64
FN1-225ENST00000494446 CRYZL1O95825 349 aa4.82□□□□□ -1.64
FN1-225ENST00000494446 IFNA7P01567 189 aa4.82□□□□□ -1.64
FN1-225ENST00000494446 REG1AP05451 166 aa4.82□□□□□ -1.64
FN1-225ENST00000494446 HIST1H1BP16401 226 aaKnown RBP4.82□□□□□ -1.64
FN1-225ENST00000494446 S100A11P31949 105 aa4.82□□□□□ -1.64
FN1-225ENST00000494446 EMP1P54849 157 aa4.82□□□□□ -1.64
FN1-225ENST00000494446 SUPT4H1P63272 117 aaKnown RBP4.82□□□□□ -1.64
FN1-225ENST00000494446 TMEM41BQ5BJD5 291 aa4.82□□□□□ -1.64
FN1-225ENST00000494446 CLLU1Q5K131 121 aa4.82□□□□□ -1.64
FN1-225ENST00000494446 MMD2Q8IY49 270 aa4.82□□□□□ -1.64
FN1-225ENST00000494446 CMSS1Q9BQ75 279 aaKnown RBP4.82□□□□□ -1.64
FN1-225ENST00000494446 RTBDNQ9BSG5 229 aaPredicted RBP4.82□□□□□ -1.64
FN1-225ENST00000494446 HDHD3Q9BSH5 251 aaPredicted RBP4.82□□□□□ -1.64
FN1-225ENST00000494446 NMES1Q9C002 83 aa4.82□□□□□ -1.64
FN1-225ENST00000494446 FXYD6Q9H0Q3 95 aa4.82□□□□□ -1.64
FN1-225ENST00000494446 HMCN2Q8NDA2 5059 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 TRBV6-7A0A0A0MS04 114 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 A0A0D9SG52 128 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 RNF222A6NCQ9 220 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 OR2T8A6NH00 312 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 E7EUB6 86 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 ARPC5O15511 151 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 TSC22D2O75157 780 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 B3GALNT1O75752 331 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 NAPSAO96009 420 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 CFDP00746 253 aaPredicted RBP4.81□□□□□ -1.64
FN1-225ENST00000494446 IL6RP08887 468 aaPredicted RBP4.81□□□□□ -1.64
FN1-225ENST00000494446 SPART-AS1P0CW21 52 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 SAA1P0DJI8 122 aaPredicted RBP4.81□□□□□ -1.64
FN1-225ENST00000494446 RRASP10301 218 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 AREGP15514 252 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 VAMP1P23763 118 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 RPL27AP46776 148 aaKnown RBP4.81□□□□□ -1.64
FN1-225ENST00000494446 UCP3P55916 312 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 ARPC4P59998 168 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 PAFAH1B2P68402 229 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 OR2F1Q13607 317 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 TMEM88Q6PEY1 159 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 DHRS11Q6UWP2 260 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 ZNF66Q6ZN08 573 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 TMUB2Q71RG4 321 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 C15orf53Q8NAA6 179 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.81□□□□□ -1.64
FN1-225ENST00000494446 ZNRF2Q8NHG8 242 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 COQ8AQ8NI60 647 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 ZNF502Q8TBZ5 544 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 MAFIPQ8WZ33 124 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 RHPN1-AS1Q9BWJ2 59 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 OR2D2Q9H210 308 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 C12orf4Q9NQ89 552 aa4.81□□□□□ -1.64
FN1-225ENST00000494446 SLC2A9Q9NRM0 540 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms