RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 MS4A10Q96PG2 267 aa9.41□□□□□ -0.9
UPF3A-210ENST00000493727 THYN1Q9P016 225 aa9.41□□□□□ -0.9
UPF3A-210ENST00000493727 ZMAT5Q9UDW3 170 aaKnown RBP9.41□□□□□ -0.9
UPF3A-210ENST00000493727 BIRC6Q9NR09 4857 aa9.41□□□□□ -0.9
UPF3A-210ENST00000493727 RPS10-NUDT3A0A1W2PQS6 291 aa9.4□□□□□ -0.9
UPF3A-210ENST00000493727 IGSF23A1L1A6 192 aa9.4□□□□□ -0.9
UPF3A-210ENST00000493727 H3BUA1 57 aa9.4□□□□□ -0.9
UPF3A-210ENST00000493727 OR2J3O76001 311 aa9.4□□□□□ -0.9
UPF3A-210ENST00000493727 CST7O76096 145 aa9.4□□□□□ -0.9
UPF3A-210ENST00000493727 SULT1A1P50225 295 aa9.4□□□□□ -0.9
UPF3A-210ENST00000493727 AP2S1P53680 142 aaPredicted RBP9.4□□□□□ -0.9
UPF3A-210ENST00000493727 TPPP2P59282 170 aa9.4□□□□□ -0.9
UPF3A-210ENST00000493727 HBG1P69891 147 aa9.4□□□□□ -0.9
UPF3A-210ENST00000493727 HBG2P69892 147 aa9.4□□□□□ -0.9
UPF3A-210ENST00000493727 EWSR1Q01844 656 aaKnown RBP eCLIP9.4□□□□□ -0.9
UPF3A-210ENST00000493727 BAXQ07812 192 aa9.4□□□□□ -0.9
UPF3A-210ENST00000493727 EXOSC2Q13868 293 aaKnown RBP9.4□□□□□ -0.9
UPF3A-210ENST00000493727 BSXQ3C1V8 233 aa9.4□□□□□ -0.9
UPF3A-210ENST00000493727 C19orf54Q5BKX5 351 aa9.4□□□□□ -0.9
UPF3A-210ENST00000493727 TMEM14EPQ6UXP3 125 aa9.4□□□□□ -0.9
UPF3A-210ENST00000493727 TMEM252Q8N6L7 170 aa9.4□□□□□ -0.9
UPF3A-210ENST00000493727 TMEM217Q8N7C4 229 aa9.4□□□□□ -0.9
UPF3A-210ENST00000493727 OR10P1Q8NGE3 313 aa9.4□□□□□ -0.9
UPF3A-210ENST00000493727 RNASEH2CQ8TDP1 164 aaKnown RBP9.4□□□□□ -0.9
UPF3A-210ENST00000493727 HYLS1Q96M11 299 aa9.4□□□□□ -0.9
UPF3A-210ENST00000493727 MCRIP2Q9BUT9 160 aaKnown RBP9.4□□□□□ -0.9
UPF3A-210ENST00000493727 DNAH1Q9P2D7 4330 aa9.39□□□□□ -0.91
UPF3A-210ENST00000493727 IGLV11-55A0A075B6I3 123 aa9.39□□□□□ -0.91
UPF3A-210ENST00000493727 IGHV3-21A0A0B4J1V1 117 aa9.39□□□□□ -0.91
UPF3A-210ENST00000493727 SOX15O60248 233 aa9.39□□□□□ -0.91
UPF3A-210ENST00000493727 TRGV3P03979 118 aa9.39□□□□□ -0.91
UPF3A-210ENST00000493727 PPIFP30405 207 aaKnown RBP9.39□□□□□ -0.91
UPF3A-210ENST00000493727 MFAP2P55001 183 aa9.39□□□□□ -0.91
UPF3A-210ENST00000493727 RHOGP84095 191 aa9.39□□□□□ -0.91
UPF3A-210ENST00000493727 DEFA5Q01523 94 aa9.39□□□□□ -0.91
UPF3A-210ENST00000493727 CFHR3Q02985 330 aa9.39□□□□□ -0.91
UPF3A-210ENST00000493727 TEX38Q6PEX7 206 aa9.39□□□□□ -0.91
UPF3A-210ENST00000493727 OR11H4Q8NGC9 324 aa9.39□□□□□ -0.91
UPF3A-210ENST00000493727 TMEM170AQ8WVE7 144 aa9.39□□□□□ -0.91
UPF3A-210ENST00000493727 SLC35E1Q96K37 410 aa9.39□□□□□ -0.91
UPF3A-210ENST00000493727 MFFQ9GZY8 342 aa9.39□□□□□ -0.91
UPF3A-210ENST00000493727 SLA2Q9H6Q3 261 aa9.39□□□□□ -0.91
UPF3A-210ENST00000493727 TNFSF18Q9UNG2 199 aa9.39□□□□□ -0.91
UPF3A-210ENST00000493727 HSPB11Q9Y547 144 aa9.39□□□□□ -0.91
UPF3A-210ENST00000493727 KRTAP4-8A0A0G2JLE6 195 aa9.38□□□□□ -0.91
UPF3A-210ENST00000493727 SMCO3A2RU48 225 aa9.38□□□□□ -0.91
UPF3A-210ENST00000493727 FAM223BA6NKX1 122 aa9.38□□□□□ -0.91
UPF3A-210ENST00000493727 HMSDA8MTL9 139 aa9.38□□□□□ -0.91
UPF3A-210ENST00000493727 MT-CO2P00403 227 aa9.38□□□□□ -0.91
UPF3A-210ENST00000493727 IGHG4P01861 327 aa9.38□□□□□ -0.91
UPF3A-210ENST00000493727 HNRNPCP07910 306 aaKnown RBP eCLIP9.38□□□□□ -0.91
UPF3A-210ENST00000493727 SLC38A11Q08AI6 406 aa9.38□□□□□ -0.91
UPF3A-210ENST00000493727 EGFEM1PQ0D2K5 195 aa9.38□□□□□ -0.91
UPF3A-210ENST00000493727 FOXE3Q13461 319 aa9.38□□□□□ -0.91
UPF3A-210ENST00000493727 ETFRF1Q6IPR1 90 aa9.38□□□□□ -0.91
UPF3A-210ENST00000493727 C10orf99Q6UWK7 81 aa9.38□□□□□ -0.91
UPF3A-210ENST00000493727 ACOT7LQ6ZUV0 252 aa9.38□□□□□ -0.91
UPF3A-210ENST00000493727 SLC16A13Q7RTY0 426 aa9.38□□□□□ -0.91
UPF3A-210ENST00000493727 FAM223AQ8IWN6 122 aa9.38□□□□□ -0.91
UPF3A-210ENST00000493727 OR1S2Q8NGQ3 325 aa9.38□□□□□ -0.91
UPF3A-210ENST00000493727 WWC2-AS2Q96NR7 200 aa9.38□□□□□ -0.91
UPF3A-210ENST00000493727 AQP10Q96PS8 301 aa9.38□□□□□ -0.91
UPF3A-210ENST00000493727 SMIM3Q9BZL3 60 aa9.38□□□□□ -0.91
UPF3A-210ENST00000493727 ZMAT4Q9H898 229 aa9.38□□□□□ -0.91
UPF3A-210ENST00000493727 KRTAP9-7A8MTY7 169 aa9.37□□□□□ -0.91
UPF3A-210ENST00000493727 NDUFB8O95169 186 aa9.37□□□□□ -0.91
UPF3A-210ENST00000493727 BRI3O95415 125 aa9.37□□□□□ -0.91
UPF3A-210ENST00000493727 ELANEP08246 267 aa9.37□□□□□ -0.91
UPF3A-210ENST00000493727 S100A11P31949 105 aa9.37□□□□□ -0.91
UPF3A-210ENST00000493727 MYCNOSP40205 109 aa9.37□□□□□ -0.91
UPF3A-210ENST00000493727 EIF2B2P49770 351 aaKnown RBP9.37□□□□□ -0.91
UPF3A-210ENST00000493727 AKR1C1Q04828 323 aa9.37□□□□□ -0.91
UPF3A-210ENST00000493727 ATP5G2Q06055 141 aa9.37□□□□□ -0.91
UPF3A-210ENST00000493727 OR2F1Q13607 317 aa9.37□□□□□ -0.91
UPF3A-210ENST00000493727 CLINT1Q14677 625 aa9.37□□□□□ -0.91
UPF3A-210ENST00000493727 DEFB121Q5J5C9 76 aa9.37□□□□□ -0.91
UPF3A-210ENST00000493727 ACSM6Q6P461 480 aa9.37□□□□□ -0.91
UPF3A-210ENST00000493727 NECAP1Q8NC96 275 aa9.37□□□□□ -0.91
UPF3A-210ENST00000493727 OR5C1Q8NGR4 320 aa9.37□□□□□ -0.91
UPF3A-210ENST00000493727 DMRT1Q9Y5R6 373 aa9.37□□□□□ -0.91
UPF3A-210ENST00000493727 LYSTQ99698 3801 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 A0A0G2JLM5 398 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 WI2-2373I1.2A0A1W2PRP0 233 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 RNF222A6NCQ9 220 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 BOLA2-SMG1P6H3BVE0 249 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 IGHV3-48P01763 117 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 PSMB8P28062 276 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 GPX4P36969 197 aaPredicted RBP9.36□□□□□ -0.91
UPF3A-210ENST00000493727 RAB9AP51151 201 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 NKX2-5P52952 324 aaPredicted RBP9.36□□□□□ -0.91
UPF3A-210ENST00000493727 KRTAP10-11P60412 298 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 DLK1P80370 383 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 NHLH2Q02577 135 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 CD69Q07108 199 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 ARL16Q0P5N6 197 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 C15orf32Q32M92 178 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 HAPLN4Q86UW8 402 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 UBAC2Q8NBM4 344 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 EEF1AKMT3Q96AZ1 226 aa9.36□□□□□ -0.91
UPF3A-210ENST00000493727 ACY3Q96HD9 319 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms