RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 ARFGEF3Q5TH69 2177 aa9.5□□□□□ -0.89
HDAC4-210ENST00000493582 A6NDN8 102 aa9.5□□□□□ -0.89
HDAC4-210ENST00000493582 ZNF207O43670 478 aaKnown RBP9.5□□□□□ -0.89
HDAC4-210ENST00000493582 HSPB8Q9UJY1 196 aa9.5□□□□□ -0.89
HDAC4-210ENST00000493582 PILRBQ9UKJ0 227 aa9.5□□□□□ -0.89
HDAC4-210ENST00000493582 TEX48A0A1B0GUV7 120 aa9.5□□□□□ -0.89
HDAC4-210ENST00000493582 IGHV3-48P01763 117 aa9.5□□□□□ -0.89
HDAC4-210ENST00000493582 CCL4P13236 92 aa9.5□□□□□ -0.89
HDAC4-210ENST00000493582 NEU4Q8WWR8 484 aaPredicted RBP9.5□□□□□ -0.89
HDAC4-210ENST00000493582 THYN1Q9P016 225 aa9.5□□□□□ -0.89
HDAC4-210ENST00000493582 DSPP15924 2871 aaKnown RBP9.5□□□□□ -0.89
HDAC4-210ENST00000493582 FBLL1A6NHQ2 334 aaKnown RBP9.49□□□□□ -0.89
HDAC4-210ENST00000493582 FGF6P10767 208 aa9.49□□□□□ -0.89
HDAC4-210ENST00000493582 MPV17P39210 176 aa9.49□□□□□ -0.89
HDAC4-210ENST00000493582 SSBP2P81877 361 aaPredicted RBP9.49□□□□□ -0.89
HDAC4-210ENST00000493582 VSTM2AQ8TAG5 236 aa9.49□□□□□ -0.89
HDAC4-210ENST00000493582 PAXXQ9BUH6 204 aa9.49□□□□□ -0.89
HDAC4-210ENST00000493582 IFI27L2Q9H2X8 130 aa9.49□□□□□ -0.89
HDAC4-210ENST00000493582 FOXA2Q9Y261 457 aaPredicted RBP9.49□□□□□ -0.89
HDAC4-210ENST00000493582 PPIAL4CA0A0B4J2A2 164 aa9.49□□□□□ -0.89
HDAC4-210ENST00000493582 C9orf172C9J069 976 aa9.49□□□□□ -0.89
HDAC4-210ENST00000493582 CHEK1O14757 476 aa9.49□□□□□ -0.89
HDAC4-210ENST00000493582 AGFG2O95081 481 aa9.49□□□□□ -0.89
HDAC4-210ENST00000493582 PRSS57Q6UWY2 283 aa9.49□□□□□ -0.89
HDAC4-210ENST00000493582 FAM90A1Q86YD7 464 aa9.49□□□□□ -0.89
HDAC4-210ENST00000493582 TBC1D28Q2M2D7 210 aa9.49□□□□□ -0.89
HDAC4-210ENST00000493582 CD177Q8N6Q3 437 aa9.49□□□□□ -0.89
HDAC4-210ENST00000493582 BLNKQ8WV28 456 aa9.49□□□□□ -0.89
HDAC4-210ENST00000493582 WFDC12Q8WWY7 111 aa9.49□□□□□ -0.89
HDAC4-210ENST00000493582 GUCD1Q96NT3 240 aa9.49□□□□□ -0.89
HDAC4-210ENST00000493582 ZNF747Q9BV97 191 aa9.49□□□□□ -0.89
HDAC4-210ENST00000493582 HES7Q9BYE0 225 aa9.49□□□□□ -0.89
HDAC4-210ENST00000493582 RPP21Q9H633 154 aaKnown RBP9.49□□□□□ -0.89
HDAC4-210ENST00000493582 CACNA1EQ15878 2313 aa9.48□□□□□ -0.89
HDAC4-210ENST00000493582 TMEM238LA0A1B0GVL6 79 aa9.48□□□□□ -0.89
HDAC4-210ENST00000493582 A0A1W2PPM0 123 aa9.48□□□□□ -0.89
HDAC4-210ENST00000493582 MOSP00540 346 aa9.48□□□□□ -0.89
HDAC4-210ENST00000493582 CYB561P49447 251 aa9.48□□□□□ -0.89
HDAC4-210ENST00000493582 TM4SF20Q53R12 229 aa9.48□□□□□ -0.89
HDAC4-210ENST00000493582 WDR82Q6UXN9 313 aa9.48□□□□□ -0.89
HDAC4-210ENST00000493582 OR10W1Q8NGF6 305 aa9.48□□□□□ -0.89
HDAC4-210ENST00000493582 DDB2Q92466 427 aa9.48□□□□□ -0.89
HDAC4-210ENST00000493582 C19orf24Q9BVV8 132 aa9.48□□□□□ -0.89
HDAC4-210ENST00000493582 FZR1Q9UM11 496 aa9.48□□□□□ -0.89
HDAC4-210ENST00000493582 LY6G6EA0A0G2JKS1 128 aa9.48□□□□□ -0.89
HDAC4-210ENST00000493582 A8MWL6 223 aa9.48□□□□□ -0.89
HDAC4-210ENST00000493582 F2RL2O00254 374 aa9.48□□□□□ -0.89
HDAC4-210ENST00000493582 MGST3O14880 152 aa9.48□□□□□ -0.89
HDAC4-210ENST00000493582 FAM87AP0C7U9 286 aa9.48□□□□□ -0.89
HDAC4-210ENST00000493582 RAB30Q15771 203 aa9.48□□□□□ -0.89
HDAC4-210ENST00000493582 TMEM177Q53S58 311 aa9.48□□□□□ -0.89
HDAC4-210ENST00000493582 NDFIP1Q9BT67 221 aa9.48□□□□□ -0.89
HDAC4-210ENST00000493582 U3KQA8 63 aa9.48□□□□□ -0.89
HDAC4-210ENST00000493582 PCNX2A6NKB5 2137 aa9.48□□□□□ -0.89
HDAC4-210ENST00000493582 PPIAL4EA0A075B759 164 aa9.47□□□□□ -0.89
HDAC4-210ENST00000493582 PSMB11A5LHX3 300 aa9.47□□□□□ -0.89
HDAC4-210ENST00000493582 FNDC10F2Z333 226 aa9.47□□□□□ -0.89
HDAC4-210ENST00000493582 APOHP02749 345 aaPredicted RBP9.47□□□□□ -0.89
HDAC4-210ENST00000493582 SLC25A5P05141 298 aaKnown RBP9.47□□□□□ -0.89
HDAC4-210ENST00000493582 CYC1P08574 325 aa9.47□□□□□ -0.89
HDAC4-210ENST00000493582 PPIAL4FP0DN26 164 aa9.47□□□□□ -0.89
HDAC4-210ENST00000493582 LTBRP36941 435 aa9.47□□□□□ -0.89
HDAC4-210ENST00000493582 P01737 135 aa9.47□□□□□ -0.89
HDAC4-210ENST00000493582 FAM106CPP0CH98 169 aa9.47□□□□□ -0.89
HDAC4-210ENST00000493582 HOXC12P31275 282 aa9.47□□□□□ -0.89
HDAC4-210ENST00000493582 LOXL3P58215 753 aa9.47□□□□□ -0.89
HDAC4-210ENST00000493582 FAM106AQ4KMX7 169 aa9.47□□□□□ -0.89
HDAC4-210ENST00000493582 OR8A1Q8NGG7 326 aa9.47□□□□□ -0.89
HDAC4-210ENST00000493582 PGPA6NDG6 321 aa9.47□□□□□ -0.89
HDAC4-210ENST00000493582 H3BTX0 84 aa9.47□□□□□ -0.89
HDAC4-210ENST00000493582 NDUFS8O00217 210 aa9.47□□□□□ -0.89
HDAC4-210ENST00000493582 COX7A2P2O60397 106 aa9.47□□□□□ -0.89
HDAC4-210ENST00000493582 MAGEA5P43359 124 aa9.47□□□□□ -0.89
HDAC4-210ENST00000493582 PATE2Q6UY27 113 aa9.47□□□□□ -0.89
HDAC4-210ENST00000493582 KLF14Q8TD94 323 aaPredicted RBP9.47□□□□□ -0.89
HDAC4-210ENST00000493582 SIGMAR1Q99720 223 aa9.47□□□□□ -0.89
HDAC4-210ENST00000493582 AP5S1Q9NUS5 200 aa9.47□□□□□ -0.89
HDAC4-210ENST00000493582 EPDR1Q9UM22 224 aa9.47□□□□□ -0.89
HDAC4-210ENST00000493582 AHCTF1Q8WYP5 2266 aa9.46□□□□□ -0.89
HDAC4-210ENST00000493582 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.46□□□□□ -0.89
HDAC4-210ENST00000493582 ACP1P24666 158 aa9.46□□□□□ -0.89
HDAC4-210ENST00000493582 FOLR3P41439 243 aa9.46□□□□□ -0.89
HDAC4-210ENST00000493582 PIP4P2Q8N4L2 257 aa9.46□□□□□ -0.89
HDAC4-210ENST00000493582 PRR7Q8TB68 274 aa9.46□□□□□ -0.89
HDAC4-210ENST00000493582 ADTRPQ96IZ2 230 aa9.46□□□□□ -0.89
HDAC4-210ENST00000493582 GPR82Q96P67 336 aa9.46□□□□□ -0.89
HDAC4-210ENST00000493582 PRSS22Q9GZN4 317 aa9.46□□□□□ -0.89
HDAC4-210ENST00000493582 SVILO95425 2214 aa9.46□□□□□ -0.9
HDAC4-210ENST00000493582 IQCF6A8MYZ5 107 aa9.46□□□□□ -0.9
HDAC4-210ENST00000493582 PRDX2P32119 198 aa9.46□□□□□ -0.9
HDAC4-210ENST00000493582 HSD52Q0P140 79 aa9.46□□□□□ -0.9
HDAC4-210ENST00000493582 C10orf113Q5VZT2 155 aa9.46□□□□□ -0.9
HDAC4-210ENST00000493582 RBPMS2Q6ZRY4 209 aaKnown RBP9.46□□□□□ -0.9
HDAC4-210ENST00000493582 FXYD5Q96DB9 178 aa9.46□□□□□ -0.9
HDAC4-210ENST00000493582 MRPL32Q9BYC8 188 aaKnown RBP9.46□□□□□ -0.9
HDAC4-210ENST00000493582 JPT1Q9UK76 154 aa9.46□□□□□ -0.9
HDAC4-210ENST00000493582 ZFHX4Q86UP3 3567 aa9.45□□□□□ -0.9
HDAC4-210ENST00000493582 A1L4Q6 167 aa9.45□□□□□ -0.9
HDAC4-210ENST00000493582 SAA2P0DJI9 122 aaPredicted RBP9.45□□□□□ -0.9
HDAC4-210ENST00000493582 FXYD7P58549 80 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms