RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 CENPSQ8N2Z9 138 aa9.14□□□□□ -0.95
COL6A1-205ENST00000492851 LILRB2Q8N423 598 aa9.14□□□□□ -0.95
COL6A1-205ENST00000492851 RAB2BQ8WUD1 216 aa9.14□□□□□ -0.95
COL6A1-205ENST00000492851 FNDC4Q9H6D8 234 aaPredicted RBP9.14□□□□□ -0.95
COL6A1-205ENST00000492851 PFDN2Q9UHV9 154 aa9.14□□□□□ -0.95
COL6A1-205ENST00000492851 IGHV3-66A0A0C4DH42 116 aa9.13□□□□□ -0.95
COL6A1-205ENST00000492851 A0A0G2JRQ6 117 aa9.13□□□□□ -0.95
COL6A1-205ENST00000492851 K7EQG2 157 aa9.13□□□□□ -0.95
COL6A1-205ENST00000492851 ANXA3P12429 323 aa9.13□□□□□ -0.95
COL6A1-205ENST00000492851 TMBIM6P55061 237 aa9.13□□□□□ -0.95
COL6A1-205ENST00000492851 RBMS2Q15434 407 aaKnown RBP9.13□□□□□ -0.95
COL6A1-205ENST00000492851 MLANAQ16655 118 aa9.13□□□□□ -0.95
COL6A1-205ENST00000492851 LEMD1Q68G75 181 aa9.13□□□□□ -0.95
COL6A1-205ENST00000492851 LGALS9CQ6DKI2 356 aa9.13□□□□□ -0.95
COL6A1-205ENST00000492851 SLC24A4Q8NFF2 622 aa9.13□□□□□ -0.95
COL6A1-205ENST00000492851 STXBP6Q8NFX7 210 aa9.13□□□□□ -0.95
COL6A1-205ENST00000492851 GPR146Q96CH1 333 aa9.13□□□□□ -0.95
COL6A1-205ENST00000492851 SEPSECSQ9HD40 501 aaKnown RBP9.13□□□□□ -0.95
COL6A1-205ENST00000492851 CACNG5Q9UF02 275 aa9.13□□□□□ -0.95
COL6A1-205ENST00000492851 U3KQ87 197 aa9.13□□□□□ -0.95
COL6A1-205ENST00000492851 GSTZ1O43708 216 aaPredicted RBP9.12□□□□□ -0.95
COL6A1-205ENST00000492851 IGKV1-17P01599 117 aa9.12□□□□□ -0.95
COL6A1-205ENST00000492851 HNRNPCP07910 306 aaKnown RBP eCLIP9.12□□□□□ -0.95
COL6A1-205ENST00000492851 SULT1A3P0DMM9 295 aa9.12□□□□□ -0.95
COL6A1-205ENST00000492851 SULT1A4P0DMN0 295 aa9.12□□□□□ -0.95
COL6A1-205ENST00000492851 OR10J1P30954 320 aa9.12□□□□□ -0.95
COL6A1-205ENST00000492851 TIGITQ495A1 244 aa9.12□□□□□ -0.95
COL6A1-205ENST00000492851 PRSS54Q6PEW0 395 aa9.12□□□□□ -0.95
COL6A1-205ENST00000492851 CLVS1Q8IUQ0 354 aaPredicted RBP9.12□□□□□ -0.95
COL6A1-205ENST00000492851 OR4C16Q8NGL9 310 aa9.12□□□□□ -0.95
COL6A1-205ENST00000492851 CCDC59Q9P031 241 aaKnown RBP9.12□□□□□ -0.95
COL6A1-205ENST00000492851 U3KQE9 123 aa9.12□□□□□ -0.95
COL6A1-205ENST00000492851 ANKRD20A5PA0PJZ0 165 aa9.11□□□□□ -0.95
COL6A1-205ENST00000492851 C11orf94C9JXX5 98 aa9.11□□□□□ -0.95
COL6A1-205ENST00000492851 NOL3O60936 208 aaKnown RBP9.11□□□□□ -0.95
COL6A1-205ENST00000492851 IGLC1P0CG04 106 aa9.11□□□□□ -0.95
COL6A1-205ENST00000492851 RD3LP0DJH9 198 aa9.11□□□□□ -0.95
COL6A1-205ENST00000492851 MIFP14174 115 aa9.11□□□□□ -0.95
COL6A1-205ENST00000492851 NPY1RP25929 384 aa9.11□□□□□ -0.95
COL6A1-205ENST00000492851 NUP62P37198 522 aaPredicted RBP9.11□□□□□ -0.95
COL6A1-205ENST00000492851 CCR6P51684 374 aa9.11□□□□□ -0.95
COL6A1-205ENST00000492851 NUTF2P61970 127 aaKnown RBP9.11□□□□□ -0.95
COL6A1-205ENST00000492851 SNRPD3P62318 126 aaKnown RBP9.11□□□□□ -0.95
COL6A1-205ENST00000492851 SRPXP78539 464 aa9.11□□□□□ -0.95
COL6A1-205ENST00000492851 SPCS2Q15005 226 aa9.11□□□□□ -0.95
COL6A1-205ENST00000492851 NMSQ5H8A3 153 aa9.11□□□□□ -0.95
COL6A1-205ENST00000492851 FAAP20Q6NZ36 180 aa9.11□□□□□ -0.95
COL6A1-205ENST00000492851 OR51S1Q8NGJ8 323 aa9.11□□□□□ -0.95
COL6A1-205ENST00000492851 LHFPL5Q8TAF8 219 aa9.11□□□□□ -0.95
COL6A1-205ENST00000492851 C2CD4CQ8TF44 421 aa9.11□□□□□ -0.95
COL6A1-205ENST00000492851 HRH4Q9H3N8 390 aa9.11□□□□□ -0.95
COL6A1-205ENST00000492851 MRPL36Q9P0J6 103 aaKnown RBP9.11□□□□□ -0.95
COL6A1-205ENST00000492851 A0A0B4J2A0 478 aa9.1□□□□□ -0.95
COL6A1-205ENST00000492851 FABP12A6NFH5 140 aa9.1□□□□□ -0.95
COL6A1-205ENST00000492851 IFNA10P01566 189 aa9.1□□□□□ -0.95
COL6A1-205ENST00000492851 FAUP35544 74 aaKnown RBP9.1□□□□□ -0.95
COL6A1-205ENST00000492851 RND2P52198 227 aa9.1□□□□□ -0.95
COL6A1-205ENST00000492851 DHRS2Q13268 280 aa9.1□□□□□ -0.95
COL6A1-205ENST00000492851 C16orf54Q6UWD8 224 aa9.1□□□□□ -0.95
COL6A1-205ENST00000492851 TRPT1Q86TN4 253 aaKnown RBP9.1□□□□□ -0.95
COL6A1-205ENST00000492851 LGI3Q8N145 548 aa9.1□□□□□ -0.95
COL6A1-205ENST00000492851 DYNC2LI1Q8TCX1 351 aa9.1□□□□□ -0.95
COL6A1-205ENST00000492851 DCANP1Q8TF63 244 aa9.1□□□□□ -0.95
COL6A1-205ENST00000492851 C1QTNF4Q9BXJ3 329 aa9.1□□□□□ -0.95
COL6A1-205ENST00000492851 FBXL17Q9UF56 701 aa9.1□□□□□ -0.95
COL6A1-205ENST00000492851 SHPKQ9UHJ6 478 aa9.1□□□□□ -0.95
COL6A1-205ENST00000492851 TOMM40O96008 361 aa9.09□□□□□ -0.95
COL6A1-205ENST00000492851 IL4P05112 153 aa9.09□□□□□ -0.95
COL6A1-205ENST00000492851 FABP1P07148 127 aa9.09□□□□□ -0.95
COL6A1-205ENST00000492851 ZNF688P0C7X2 276 aa9.09□□□□□ -0.95
COL6A1-205ENST00000492851 GPX4P36969 197 aaPredicted RBP9.09□□□□□ -0.95
COL6A1-205ENST00000492851 NANOS2P60321 138 aaKnown RBP9.09□□□□□ -0.95
COL6A1-205ENST00000492851 KLF9Q13886 244 aaPredicted RBP9.09□□□□□ -0.95
COL6A1-205ENST00000492851 SMCO1Q147U7 214 aa9.09□□□□□ -0.95
COL6A1-205ENST00000492851 FAM24BQ8N5W8 94 aa9.09□□□□□ -0.95
COL6A1-205ENST00000492851 NPIPB3Q92617 1050 aa9.09□□□□□ -0.95
COL6A1-205ENST00000492851 MCUBQ9NWR8 336 aa9.09□□□□□ -0.95
COL6A1-205ENST00000492851 HSPB7Q9UBY9 170 aa9.09□□□□□ -0.95
COL6A1-205ENST00000492851 EPPK1P58107 5090 aaKnown RBP9.09□□□□□ -0.95
COL6A1-205ENST00000492851 DUXBA0A1W2PPF3 345 aa9.08□□□□□ -0.96
COL6A1-205ENST00000492851 ZNF705EA8MWA4 302 aaPredicted RBP9.08□□□□□ -0.96
COL6A1-205ENST00000492851 BUB3O43684 328 aa9.08□□□□□ -0.96
COL6A1-205ENST00000492851 AKR1C4P17516 323 aa9.08□□□□□ -0.96
COL6A1-205ENST00000492851 AP3S2P59780 193 aa9.08□□□□□ -0.96
COL6A1-205ENST00000492851 ACTL10Q5JWF8 245 aa9.08□□□□□ -0.96
COL6A1-205ENST00000492851 OR51G1Q8NGK1 321 aa9.08□□□□□ -0.96
COL6A1-205ENST00000492851 DTD1Q8TEA8 209 aa9.08□□□□□ -0.96
COL6A1-205ENST00000492851 GLMPQ8WWB7 406 aa9.08□□□□□ -0.96
COL6A1-205ENST00000492851 DEDD2Q8WXF8 326 aa9.08□□□□□ -0.96
COL6A1-205ENST00000492851 ACY3Q96HD9 319 aa9.08□□□□□ -0.96
COL6A1-205ENST00000492851 RAB40CQ96S21 281 aa9.08□□□□□ -0.96
COL6A1-205ENST00000492851 NRN1Q9NPD7 142 aa9.08□□□□□ -0.96
COL6A1-205ENST00000492851 PSMG4Q5JS54 123 aa9.07□□□□□ -0.96
COL6A1-205ENST00000492851 OR8G2PQ6IF36 304 aa9.07□□□□□ -0.96
COL6A1-205ENST00000492851 SIGLEC15Q6ZMC9 328 aa9.07□□□□□ -0.96
COL6A1-205ENST00000492851 SOSTQ9BQB4 213 aa9.07□□□□□ -0.96
COL6A1-205ENST00000492851 TBC1D24Q9ULP9 559 aa9.07□□□□□ -0.96
COL6A1-205ENST00000492851 HYDINQ4G0P3 5121 aa9.06□□□□□ -0.96
COL6A1-205ENST00000492851 PLECQ15149 4684 aaKnown RBP9.06□□□□□ -0.96
COL6A1-205ENST00000492851 ALMS1Q8TCU4 4167 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms