RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 GPR183P32249 361 aa17.11■□□□□ 0.33
PSPC1-204ENST00000492741 EIF5AL1Q6IS14 154 aaKnown RBP17.11■□□□□ 0.33
PSPC1-204ENST00000492741 THAP8Q8NA92 274 aa17.11■□□□□ 0.33
PSPC1-204ENST00000492741 NIPBLQ6KC79 2804 aaeCLIP17.11■□□□□ 0.331e-5■□□□□ 11.1
PSPC1-204ENST00000492741 KHDC1LQ5JSQ8 128 aa17.1■□□□□ 0.33
PSPC1-204ENST00000492741 OR2G3Q8NGZ4 309 aa17.1■□□□□ 0.33
PSPC1-204ENST00000492741 OR5B12Q96R08 314 aa17.1■□□□□ 0.33
PSPC1-204ENST00000492741 RFNGQ9Y644 331 aa17.1■□□□□ 0.33
PSPC1-204ENST00000492741 TEP1Q99973 2627 aaKnown RBP17.1■□□□□ 0.33
PSPC1-204ENST00000492741 NUPL2O15504 423 aaKnown RBP17.1■□□□□ 0.33
PSPC1-204ENST00000492741 CFDP00746 253 aaPredicted RBP17.1■□□□□ 0.33
PSPC1-204ENST00000492741 IGLC1P0CG04 106 aa17.1■□□□□ 0.33
PSPC1-204ENST00000492741 TEX261Q6UWH6 196 aa17.1■□□□□ 0.33
PSPC1-204ENST00000492741 ALKAL2Q6UX46 152 aa17.1■□□□□ 0.33
PSPC1-204ENST00000492741 CYP2G1PQ6ZSU1 146 aa17.1■□□□□ 0.33
PSPC1-204ENST00000492741 ZNF491Q8N8L2 437 aa17.1■□□□□ 0.33
PSPC1-204ENST00000492741 TMED6Q8WW62 240 aa17.1■□□□□ 0.33
PSPC1-204ENST00000492741 CCDC140Q96MF4 163 aa17.1■□□□□ 0.33
PSPC1-204ENST00000492741 TRGV9Q99603 122 aa17.1■□□□□ 0.33
PSPC1-204ENST00000492741 GGTLC1Q9BX51 225 aa17.1■□□□□ 0.33
PSPC1-204ENST00000492741 GNB4Q9HAV0 340 aa17.1■□□□□ 0.33
PSPC1-204ENST00000492741 IGKV1D-37A0A075B6S9 117 aa17.09■□□□□ 0.33
PSPC1-204ENST00000492741 TCRBV4S1A1TA0A5B7 111 aa17.09■□□□□ 0.33
PSPC1-204ENST00000492741 F8W735 103 aaPredicted RBP17.09■□□□□ 0.33
PSPC1-204ENST00000492741 SPP1P10451 314 aa17.09■□□□□ 0.33
PSPC1-204ENST00000492741 FCGR2BP31994 310 aaPredicted RBP17.09■□□□□ 0.33
PSPC1-204ENST00000492741 ZNF90Q03938 601 aa17.09■□□□□ 0.33
PSPC1-204ENST00000492741 TIGITQ495A1 244 aa17.09■□□□□ 0.33
PSPC1-204ENST00000492741 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.09■□□□□ 0.33
PSPC1-204ENST00000492741 RNF152Q8N8N0 203 aa17.09■□□□□ 0.33
PSPC1-204ENST00000492741 ANKRD34BA5PLL1 514 aa17.08■□□□□ 0.32
PSPC1-204ENST00000492741 SEC11BP0C7V7 166 aa17.08■□□□□ 0.32
PSPC1-204ENST00000492741 MIC13Q5XKP0 118 aa17.08■□□□□ 0.32
PSPC1-204ENST00000492741 C11orf44Q8N8P7 122 aa17.08■□□□□ 0.32
PSPC1-204ENST00000492741 BPIFCQ8NFQ6 507 aa17.08■□□□□ 0.32
PSPC1-204ENST00000492741 PSMG3Q9BT73 122 aaPredicted RBP17.08■□□□□ 0.32
PSPC1-204ENST00000492741 KCNIP2Q9NS61 270 aa17.08■□□□□ 0.32
PSPC1-204ENST00000492741 TIMM9Q9Y5J7 89 aa17.08■□□□□ 0.32
PSPC1-204ENST00000492741 A0A1B0GUS0 222 aa17.07■□□□□ 0.32
PSPC1-204ENST00000492741 FABP1P07148 127 aa17.07■□□□□ 0.32
PSPC1-204ENST00000492741 GATA2P23769 480 aaPredicted RBP17.07■□□□□ 0.32
PSPC1-204ENST00000492741 KIAA0141Q14154 515 aaPredicted RBP17.07■□□□□ 0.32
PSPC1-204ENST00000492741 ZNF343Q6P1L6 599 aa17.07■□□□□ 0.32
PSPC1-204ENST00000492741 PHYHIPLQ96FC7 376 aa17.07■□□□□ 0.32
PSPC1-204ENST00000492741 UBE2E2Q96LR5 201 aa17.07■□□□□ 0.32
PSPC1-204ENST00000492741 SLC45A2Q9UMX9 530 aa17.07■□□□□ 0.32
PSPC1-204ENST00000492741 PXMP4Q9Y6I8 212 aa17.07■□□□□ 0.32
PSPC1-204ENST00000492741 IFNA7P01567 189 aa17.07■□□□□ 0.32
PSPC1-204ENST00000492741 CTSGP08311 255 aa17.07■□□□□ 0.32
PSPC1-204ENST00000492741 ELLP55199 621 aaPredicted RBP17.07■□□□□ 0.32
PSPC1-204ENST00000492741 PROK1P58294 105 aa17.07■□□□□ 0.32
PSPC1-204ENST00000492741 B2MP61769 119 aa17.07■□□□□ 0.32
PSPC1-204ENST00000492741 SELENOTP62341 195 aa17.07■□□□□ 0.32
PSPC1-204ENST00000492741 ZNF616Q08AN1 781 aa17.07■□□□□ 0.32
PSPC1-204ENST00000492741 FOXL1Q12952 345 aa17.07■□□□□ 0.32
PSPC1-204ENST00000492741 FFAR4Q5NUL3 377 aa17.07■□□□□ 0.32
PSPC1-204ENST00000492741 TMEM182Q6ZP80 229 aaPredicted RBP17.07■□□□□ 0.32
PSPC1-204ENST00000492741 ATP6V0BQ99437 205 aa17.07■□□□□ 0.32
PSPC1-204ENST00000492741 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.06■□□□□ 0.32
PSPC1-204ENST00000492741 IGKV1-17P01599 117 aa17.06■□□□□ 0.32
PSPC1-204ENST00000492741 RD3LP0DJH9 198 aa17.06■□□□□ 0.32
PSPC1-204ENST00000492741 ARL3P36405 182 aa17.06■□□□□ 0.32
PSPC1-204ENST00000492741 RPL29P47914 159 aaKnown RBP17.06■□□□□ 0.32
PSPC1-204ENST00000492741 SERF2P84101 59 aa17.06■□□□□ 0.32
PSPC1-204ENST00000492741 TCTEX1D4Q5JR98 221 aa17.06■□□□□ 0.32
PSPC1-204ENST00000492741 STPG3Q8N7X2 389 aa17.06■□□□□ 0.32
PSPC1-204ENST00000492741 ZNF680Q8NEM1 530 aa17.06■□□□□ 0.32
PSPC1-204ENST00000492741 MYOZ3Q8TDC0 251 aa17.06■□□□□ 0.32
PSPC1-204ENST00000492741 WIPF2Q8TF74 440 aaPredicted RBP17.06■□□□□ 0.32
PSPC1-204ENST00000492741 CHRDL1Q9BU40 450 aa17.06■□□□□ 0.32
PSPC1-204ENST00000492741 PPP5D1E7EU14 171 aa17.05■□□□□ 0.32
PSPC1-204ENST00000492741 TGOLN2O43493 480 aa17.05■□□□□ 0.32
PSPC1-204ENST00000492741 TSPAN15O95858 294 aa17.05■□□□□ 0.32
PSPC1-204ENST00000492741 CD28P10747 220 aa17.05■□□□□ 0.32
PSPC1-204ENST00000492741 FAM209BQ5JX69 171 aa17.05■□□□□ 0.32
PSPC1-204ENST00000492741 AKR1C8PQ5T2L2 129 aa17.05■□□□□ 0.32
PSPC1-204ENST00000492741 SPSB3Q6PJ21 355 aa17.05■□□□□ 0.32
PSPC1-204ENST00000492741 Q6ZRG5 221 aa17.05■□□□□ 0.32
PSPC1-204ENST00000492741 IFITM2Q01629 132 aa17.04■□□□□ 0.32
PSPC1-204ENST00000492741 SLC39A9Q9NUM3 307 aa17.04■□□□□ 0.32
PSPC1-204ENST00000492741 PEF1Q9UBV8 284 aaKnown RBP17.04■□□□□ 0.32
PSPC1-204ENST00000492741 IGHV3-35A0A0C4DH35 117 aa17.04■□□□□ 0.32
PSPC1-204ENST00000492741 TRBV12-3P01733 135 aa17.04■□□□□ 0.32
PSPC1-204ENST00000492741 PSG1P11464 419 aa17.04■□□□□ 0.32
PSPC1-204ENST00000492741 CDX1P47902 265 aaPredicted RBP17.04■□□□□ 0.32
PSPC1-204ENST00000492741 YPEL3P61236 119 aaPredicted RBP17.04■□□□□ 0.32
PSPC1-204ENST00000492741 FAM74A1Q5RGS3 127 aa17.04■□□□□ 0.32
PSPC1-204ENST00000492741 Q8WTZ3 238 aa17.04■□□□□ 0.32
PSPC1-204ENST00000492741 UBQLN2Q9UHD9 624 aa17.04■□□□□ 0.32
PSPC1-204ENST00000492741 LGALS1P09382 135 aaKnown RBP17.03■□□□□ 0.32
PSPC1-204ENST00000492741 LINC00869P0C866 280 aa17.03■□□□□ 0.32
PSPC1-204ENST00000492741 ADMP35318 185 aa17.03■□□□□ 0.32
PSPC1-204ENST00000492741 HIST2H2BDQ6DRA6 164 aa17.03■□□□□ 0.32
PSPC1-204ENST00000492741 NUDT19A8MXV4 375 aa17.02■□□□□ 0.32
PSPC1-204ENST00000492741 YIF1AO95070 293 aa17.02■□□□□ 0.32
PSPC1-204ENST00000492741 TOMM40O96008 361 aa17.02■□□□□ 0.32
PSPC1-204ENST00000492741 PRR20EP86478 221 aa17.02■□□□□ 0.32
PSPC1-204ENST00000492741 PRR20CP86479 221 aa17.02■□□□□ 0.32
PSPC1-204ENST00000492741 PRR20DP86480 221 aa17.02■□□□□ 0.32
PSPC1-204ENST00000492741 PRR20BP86481 221 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms