RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 SLC22A6Q4U2R8 563 aa10.35□□□□□ -0.75
HDAC3-213ENST00000492506 TMEM42Q69YG0 159 aa10.35□□□□□ -0.75
HDAC3-213ENST00000492506 C8orf86Q6ZUL3 223 aa10.35□□□□□ -0.75
HDAC3-213ENST00000492506 OR51E1Q8TCB6 317 aa10.35□□□□□ -0.75
HDAC3-213ENST00000492506 TM2D1Q9BX74 207 aa10.35□□□□□ -0.75
HDAC3-213ENST00000492506 CLEC7AQ9BXN2 247 aa10.35□□□□□ -0.75
HDAC3-213ENST00000492506 TMEM133Q9H2Q1 129 aa10.35□□□□□ -0.75
HDAC3-213ENST00000492506 PIGLQ9Y2B2 252 aa10.35□□□□□ -0.75
HDAC3-213ENST00000492506 POLDIP2Q9Y2S7 368 aa10.35□□□□□ -0.75
HDAC3-213ENST00000492506 PSMB11A5LHX3 300 aa10.34□□□□□ -0.75
HDAC3-213ENST00000492506 CBY3A6NI87 242 aa10.34□□□□□ -0.75
HDAC3-213ENST00000492506 J3QR06 171 aa10.34□□□□□ -0.75
HDAC3-213ENST00000492506 NRASP01111 189 aa10.34□□□□□ -0.75
HDAC3-213ENST00000492506 NKX2-1P43699 371 aaPredicted RBP10.34□□□□□ -0.75
HDAC3-213ENST00000492506 ZNF880Q6PDB4 577 aa10.34□□□□□ -0.75
HDAC3-213ENST00000492506 GLIPR1L1Q6UWM5 242 aa10.34□□□□□ -0.75
HDAC3-213ENST00000492506 ZNF329Q86UD4 541 aa10.34□□□□□ -0.75
HDAC3-213ENST00000492506 TMEM37Q8WXS4 190 aa10.34□□□□□ -0.75
HDAC3-213ENST00000492506 IL22RA2Q969J5 263 aa10.34□□□□□ -0.75
HDAC3-213ENST00000492506 ASCL2Q99929 193 aa10.34□□□□□ -0.75
HDAC3-213ENST00000492506 ELOVL1Q9BW60 279 aa10.34□□□□□ -0.75
HDAC3-213ENST00000492506 PBOV1Q9GZY1 135 aa10.34□□□□□ -0.75
HDAC3-213ENST00000492506 TRAPPC1Q9Y5R8 145 aa10.34□□□□□ -0.75
HDAC3-213ENST00000492506 PXMP4Q9Y6I8 212 aa10.34□□□□□ -0.75
HDAC3-213ENST00000492506 RAMP3O60896 148 aa10.33□□□□□ -0.76
HDAC3-213ENST00000492506 DHRS3O75911 302 aa10.33□□□□□ -0.76
HDAC3-213ENST00000492506 PI3P19957 117 aa10.33□□□□□ -0.76
HDAC3-213ENST00000492506 AADACP22760 399 aa10.33□□□□□ -0.76
HDAC3-213ENST00000492506 MYCNOSP40205 109 aa10.33□□□□□ -0.76
HDAC3-213ENST00000492506 PIGPP57054 158 aa10.33□□□□□ -0.76
HDAC3-213ENST00000492506 YPEL3P61236 119 aaPredicted RBP10.33□□□□□ -0.76
HDAC3-213ENST00000492506 PMCHL1Q16048 86 aa10.33□□□□□ -0.76
HDAC3-213ENST00000492506 RNF151Q2KHN1 245 aa10.33□□□□□ -0.76
HDAC3-213ENST00000492506 MAJINQ3KP22 176 aa10.33□□□□□ -0.76
HDAC3-213ENST00000492506 PLAC9Q5JTB6 97 aa10.33□□□□□ -0.76
HDAC3-213ENST00000492506 TMEM252Q8N6L7 170 aa10.33□□□□□ -0.76
HDAC3-213ENST00000492506 TPRX1Q8N7U7 411 aa10.33□□□□□ -0.76
HDAC3-213ENST00000492506 MUC7Q8TAX7 377 aa10.33□□□□□ -0.76
HDAC3-213ENST00000492506 SCGB1C1Q8TD33 95 aa10.33□□□□□ -0.76
HDAC3-213ENST00000492506 RTN4IP1Q8WWV3 396 aaPredicted RBP10.33□□□□□ -0.76
HDAC3-213ENST00000492506 TXN2Q99757 166 aa10.33□□□□□ -0.76
HDAC3-213ENST00000492506 DPM3Q9P2X0 92 aa10.33□□□□□ -0.76
HDAC3-213ENST00000492506 TIMM9Q9Y5J7 89 aa10.33□□□□□ -0.76
HDAC3-213ENST00000492506 LINC00312Q9Y6C7 94 aa10.33□□□□□ -0.76
HDAC3-213ENST00000492506 SORL1Q92673 2214 aa10.32□□□□□ -0.76
HDAC3-213ENST00000492506 A0A1B0GV50 99 aa10.32□□□□□ -0.76
HDAC3-213ENST00000492506 hADV38S2A0JD32 116 aa10.32□□□□□ -0.76
HDAC3-213ENST00000492506 A6NJY4 79 aa10.32□□□□□ -0.76
HDAC3-213ENST00000492506 PRSS47A8MTI9 375 aa10.32□□□□□ -0.76
HDAC3-213ENST00000492506 FOXI3A8MTJ6 420 aaPredicted RBP10.32□□□□□ -0.76
HDAC3-213ENST00000492506 KRASP01116 189 aa10.32□□□□□ -0.76
HDAC3-213ENST00000492506 IGLV1-47P01700 117 aa10.32□□□□□ -0.76
HDAC3-213ENST00000492506 NBEAP1P0C6P0 100 aa10.32□□□□□ -0.76
HDAC3-213ENST00000492506 SLC25A6P12236 298 aa10.32□□□□□ -0.76
HDAC3-213ENST00000492506 GNRHRP30968 328 aa10.32□□□□□ -0.76
HDAC3-213ENST00000492506 PSMB3P49720 205 aa10.32□□□□□ -0.76
HDAC3-213ENST00000492506 RPL23P62829 140 aaKnown RBP10.32□□□□□ -0.76
HDAC3-213ENST00000492506 Q0VG73 95 aa10.32□□□□□ -0.76
HDAC3-213ENST00000492506 EDDM3AQ14507 147 aa10.32□□□□□ -0.76
HDAC3-213ENST00000492506 MSMO1Q15800 293 aa10.32□□□□□ -0.76
HDAC3-213ENST00000492506 OCIAD2Q56VL3 154 aa10.32□□□□□ -0.76
HDAC3-213ENST00000492506 SPSB1Q96BD6 273 aa10.32□□□□□ -0.76
HDAC3-213ENST00000492506 PRR25Q96S07 402 aa10.32□□□□□ -0.76
HDAC3-213ENST00000492506 PKIBQ9C010 78 aa10.32□□□□□ -0.76
HDAC3-213ENST00000492506 PRR13Q9NZ81 148 aa10.32□□□□□ -0.76
HDAC3-213ENST00000492506 MTCH1Q9NZJ7 389 aa10.32□□□□□ -0.76
HDAC3-213ENST00000492506 RPH3ALQ9UNE2 315 aa10.32□□□□□ -0.76
HDAC3-213ENST00000492506 SAA2-SAA4A0A096LPE2 208 aa10.31□□□□□ -0.76
HDAC3-213ENST00000492506 LCE6AA0A183 80 aa10.31□□□□□ -0.76
HDAC3-213ENST00000492506 IGSF23A1L1A6 192 aa10.31□□□□□ -0.76
HDAC3-213ENST00000492506 CEBPZOSA8MTT3 80 aa10.31□□□□□ -0.76
HDAC3-213ENST00000492506 SIRPB1O00241 398 aa10.31□□□□□ -0.76
HDAC3-213ENST00000492506 NDUFB8O95169 186 aa10.31□□□□□ -0.76
HDAC3-213ENST00000492506 TTRP02766 147 aa10.31□□□□□ -0.76
HDAC3-213ENST00000492506 CTRLP40313 264 aa10.31□□□□□ -0.76
HDAC3-213ENST00000492506 MEF2BQ02080 365 aaPredicted RBP10.31□□□□□ -0.76
HDAC3-213ENST00000492506 PSG3Q16557 428 aa10.31□□□□□ -0.76
HDAC3-213ENST00000492506 TMEM144Q7Z5S9 345 aa10.31□□□□□ -0.76
HDAC3-213ENST00000492506 RAX2Q96IS3 184 aa10.31□□□□□ -0.76
HDAC3-213ENST00000492506 ARHGAP5-AS1Q96IT6 56 aa10.31□□□□□ -0.76
HDAC3-213ENST00000492506 DUX3Q96PT4 197 aa10.31□□□□□ -0.76
HDAC3-213ENST00000492506 TXNDC17Q9BRA2 123 aa10.31□□□□□ -0.76
HDAC3-213ENST00000492506 ST6GALNAC5Q9BVH7 336 aa10.31□□□□□ -0.76
HDAC3-213ENST00000492506 PECRQ9BY49 303 aa10.31□□□□□ -0.76
HDAC3-213ENST00000492506 RBM7Q9Y580 266 aaKnown RBP10.31□□□□□ -0.76
HDAC3-213ENST00000492506 A0A0A6YYD4 124 aa10.3□□□□□ -0.76
HDAC3-213ENST00000492506 LY6LH3BQJ8 138 aa10.3□□□□□ -0.76
HDAC3-213ENST00000492506 SOCS1O15524 211 aa10.3□□□□□ -0.76
HDAC3-213ENST00000492506 PSPNO60542 156 aa10.3□□□□□ -0.76
HDAC3-213ENST00000492506 OR3A4PP47883 348 aa10.3□□□□□ -0.76
HDAC3-213ENST00000492506 NPBWR2P48146 333 aa10.3□□□□□ -0.76
HDAC3-213ENST00000492506 TMEM50BP56557 158 aa10.3□□□□□ -0.76
HDAC3-213ENST00000492506 Q6ZN92 141 aa10.3□□□□□ -0.76
HDAC3-213ENST00000492506 C19orf35Q6ZS72 473 aa10.3□□□□□ -0.76
HDAC3-213ENST00000492506 Q6ZSR3 168 aa10.3□□□□□ -0.76
HDAC3-213ENST00000492506 ABHD12Q8N2K0 398 aa10.3□□□□□ -0.76
HDAC3-213ENST00000492506 KLHL30-AS1Q8NEE0 82 aa10.3□□□□□ -0.76
HDAC3-213ENST00000492506 OR51T1Q8NGJ9 327 aa10.3□□□□□ -0.76
HDAC3-213ENST00000492506 OR5C1Q8NGR4 320 aa10.3□□□□□ -0.76
HDAC3-213ENST00000492506 C10orf35Q96D05 121 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms