RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 AP2S1P53680 142 aaPredicted RBP12.32□□□□□ -0.44
PDLIM2-217ENST00000491330 C2orf83Q53S99 150 aa12.32□□□□□ -0.44
PDLIM2-217ENST00000491330 Q6ZRM9 215 aa12.32□□□□□ -0.44
PDLIM2-217ENST00000491330 WFDC3Q8IUB2 231 aa12.32□□□□□ -0.44
PDLIM2-217ENST00000491330 GBGT1Q8N5D6 347 aa12.32□□□□□ -0.44
PDLIM2-217ENST00000491330 SLC24A4Q8NFF2 622 aa12.32□□□□□ -0.44
PDLIM2-217ENST00000491330 CSTL1Q9H114 145 aa12.32□□□□□ -0.44
PDLIM2-217ENST00000491330 TMED3Q9Y3Q3 217 aa12.32□□□□□ -0.44
PDLIM2-217ENST00000491330 U3KQ87 197 aa12.32□□□□□ -0.44
PDLIM2-217ENST00000491330 NBEAL2Q6ZNJ1 2754 aa12.31□□□□□ -0.44
PDLIM2-217ENST00000491330 TRAV2A0A0B4J234 112 aa12.31□□□□□ -0.44
PDLIM2-217ENST00000491330 CXorf65A6NEN9 183 aa12.31□□□□□ -0.44
PDLIM2-217ENST00000491330 IFNA10P01566 189 aa12.31□□□□□ -0.44
PDLIM2-217ENST00000491330 RPL35AP18077 110 aaKnown RBP12.31□□□□□ -0.44
PDLIM2-217ENST00000491330 ODF3L2Q3SX64 289 aa12.31□□□□□ -0.44
PDLIM2-217ENST00000491330 TMED4Q7Z7H5 227 aa12.31□□□□□ -0.44
PDLIM2-217ENST00000491330 OR1S2Q8NGQ3 325 aa12.31□□□□□ -0.44
PDLIM2-217ENST00000491330 HSPB7Q9UBY9 170 aa12.31□□□□□ -0.44
PDLIM2-217ENST00000491330 RABAC1Q9UI14 185 aa12.31□□□□□ -0.44
PDLIM2-217ENST00000491330 IGHV3OR16-13A0A075B7E8 117 aa12.3□□□□□ -0.44
PDLIM2-217ENST00000491330 IGHV3-74A0A0B4J1X5 117 aa12.3□□□□□ -0.44
PDLIM2-217ENST00000491330 HELTA6NFD8 242 aa12.3□□□□□ -0.44
PDLIM2-217ENST00000491330 NDUFB6O95139 128 aa12.3□□□□□ -0.44
PDLIM2-217ENST00000491330 SFT2D2O95562 160 aa12.3□□□□□ -0.44
PDLIM2-217ENST00000491330 FABP1P07148 127 aa12.3□□□□□ -0.44
PDLIM2-217ENST00000491330 TNFRSF9Q07011 255 aa12.3□□□□□ -0.44
PDLIM2-217ENST00000491330 DEFB135Q30KP9 77 aa12.3□□□□□ -0.44
PDLIM2-217ENST00000491330 GATAD1Q8WUU5 269 aa12.3□□□□□ -0.44
PDLIM2-217ENST00000491330 RNF183Q96D59 192 aa12.3□□□□□ -0.44
PDLIM2-217ENST00000491330 MAP6D1Q9H9H5 199 aa12.3□□□□□ -0.44
PDLIM2-217ENST00000491330 NUPR2A6NF83 97 aa12.29□□□□□ -0.44
PDLIM2-217ENST00000491330 MED6O75586 246 aa12.29□□□□□ -0.44
PDLIM2-217ENST00000491330 VAMP1P23763 118 aa12.29□□□□□ -0.44
PDLIM2-217ENST00000491330 NPY1RP25929 384 aa12.29□□□□□ -0.44
PDLIM2-217ENST00000491330 NUP62P37198 522 aaPredicted RBP12.29□□□□□ -0.44
PDLIM2-217ENST00000491330 BAK1Q16611 211 aa12.29□□□□□ -0.44
PDLIM2-217ENST00000491330 APRG1Q8IVJ8 170 aa12.29□□□□□ -0.44
PDLIM2-217ENST00000491330 OR1S1Q8NH92 325 aa12.29□□□□□ -0.44
PDLIM2-217ENST00000491330 CCDC32Q9BV29 185 aa12.29□□□□□ -0.44
PDLIM2-217ENST00000491330 VSIRQ9H7M9 311 aa12.29□□□□□ -0.44
PDLIM2-217ENST00000491330 KLK5Q9Y337 293 aaPredicted RBP12.29□□□□□ -0.44
PDLIM2-217ENST00000491330 IFNA4P05014 189 aa12.28□□□□□ -0.44
PDLIM2-217ENST00000491330 RPP30P78346 268 aaKnown RBP12.28□□□□□ -0.44
PDLIM2-217ENST00000491330 TMEM41BQ5BJD5 291 aa12.28□□□□□ -0.44
PDLIM2-217ENST00000491330 LYZL2Q7Z4W2 148 aa12.28□□□□□ -0.44
PDLIM2-217ENST00000491330 LYG2Q86SG7 212 aa12.28□□□□□ -0.44
PDLIM2-217ENST00000491330 STHQ8IWL8 128 aa12.28□□□□□ -0.44
PDLIM2-217ENST00000491330 STXBP6Q8NFX7 210 aa12.28□□□□□ -0.44
PDLIM2-217ENST00000491330 S100ZQ8WXG8 99 aa12.28□□□□□ -0.44
PDLIM2-217ENST00000491330 ST8SIA2Q92186 375 aa12.28□□□□□ -0.44
PDLIM2-217ENST00000491330 CIB3Q96Q77 187 aaPredicted RBP12.28□□□□□ -0.44
PDLIM2-217ENST00000491330 MS4A6AQ9H2W1 248 aa12.28□□□□□ -0.44
PDLIM2-217ENST00000491330 IL7P13232 177 aa12.27□□□□□ -0.45
PDLIM2-217ENST00000491330 ATF4P18848 351 aaPredicted RBP12.27□□□□□ -0.45
PDLIM2-217ENST00000491330 OR10J1P30954 320 aa12.27□□□□□ -0.45
PDLIM2-217ENST00000491330 RND2P52198 227 aa12.27□□□□□ -0.45
PDLIM2-217ENST00000491330 YPEL3P61236 119 aaPredicted RBP12.27□□□□□ -0.45
PDLIM2-217ENST00000491330 RAB11AP62491 216 aa12.27□□□□□ -0.45
PDLIM2-217ENST00000491330 FAM90A2PQ658T7 463 aa12.27□□□□□ -0.45
PDLIM2-217ENST00000491330 COQ8AQ8NI60 647 aa12.27□□□□□ -0.45
PDLIM2-217ENST00000491330 DTD1Q8TEA8 209 aa12.27□□□□□ -0.45
PDLIM2-217ENST00000491330 IGHV3-66A0A0C4DH42 116 aa12.26□□□□□ -0.45
PDLIM2-217ENST00000491330 A0A0J9YWU9 116 aa12.26□□□□□ -0.45
PDLIM2-217ENST00000491330 PITX3O75364 302 aa12.26□□□□□ -0.45
PDLIM2-217ENST00000491330 HNRNPCP07910 306 aaKnown RBP eCLIP12.26□□□□□ -0.45
PDLIM2-217ENST00000491330 RD3LP0DJH9 198 aa12.26□□□□□ -0.45
PDLIM2-217ENST00000491330 CRYBB3P26998 211 aa12.26□□□□□ -0.45
PDLIM2-217ENST00000491330 P2RY1P47900 373 aa12.26□□□□□ -0.45
PDLIM2-217ENST00000491330 DEFB131AP59861 70 aa12.26□□□□□ -0.45
PDLIM2-217ENST00000491330 TIGITQ495A1 244 aa12.26□□□□□ -0.45
PDLIM2-217ENST00000491330 ACY3Q96HD9 319 aa12.26□□□□□ -0.45
PDLIM2-217ENST00000491330 SDHCQ99643 169 aaPredicted RBP12.26□□□□□ -0.45
PDLIM2-217ENST00000491330 RARRES2Q99969 163 aa12.26□□□□□ -0.45
PDLIM2-217ENST00000491330 MFFQ9GZY8 342 aa12.26□□□□□ -0.45
PDLIM2-217ENST00000491330 FNDC4Q9H6D8 234 aaPredicted RBP12.26□□□□□ -0.45
PDLIM2-217ENST00000491330 ZFAND3Q9H8U3 227 aa12.26□□□□□ -0.45
PDLIM2-217ENST00000491330 S100A7P31151 101 aa12.25□□□□□ -0.45
PDLIM2-217ENST00000491330 SNRPD3P62318 126 aaKnown RBP12.25□□□□□ -0.45
PDLIM2-217ENST00000491330 PPP1R1AQ13522 171 aa12.25□□□□□ -0.45
PDLIM2-217ENST00000491330 PRSS54Q6PEW0 395 aa12.25□□□□□ -0.45
PDLIM2-217ENST00000491330 SLC35E1Q96K37 410 aa12.25□□□□□ -0.45
PDLIM2-217ENST00000491330 C9orf170A2RU37 121 aa12.24□□□□□ -0.45
PDLIM2-217ENST00000491330 NXPH3O95157 252 aa12.24□□□□□ -0.45
PDLIM2-217ENST00000491330 CA1P00915 261 aaPredicted RBP12.24□□□□□ -0.45
PDLIM2-217ENST00000491330 IFNA21P01568 189 aa12.24□□□□□ -0.45
PDLIM2-217ENST00000491330 GPX4P36969 197 aaPredicted RBP12.24□□□□□ -0.45
PDLIM2-217ENST00000491330 NUTF2P61970 127 aaKnown RBP12.24□□□□□ -0.45
PDLIM2-217ENST00000491330 PMS2P11Q13670 270 aa12.24□□□□□ -0.45
PDLIM2-217ENST00000491330 MLANAQ16655 118 aa12.24□□□□□ -0.45
PDLIM2-217ENST00000491330 NPIPB3Q92617 1050 aa12.24□□□□□ -0.45
PDLIM2-217ENST00000491330 ZFP92A6NM28 416 aa12.23□□□□□ -0.45
PDLIM2-217ENST00000491330 APOHP02749 345 aaPredicted RBP12.23□□□□□ -0.45
PDLIM2-217ENST00000491330 IL4P05112 153 aa12.23□□□□□ -0.45
PDLIM2-217ENST00000491330 OR4E1P0C645 316 aa12.23□□□□□ -0.45
PDLIM2-217ENST00000491330 IGLC1P0CG04 106 aa12.23□□□□□ -0.45
PDLIM2-217ENST00000491330 DHRS2Q13268 280 aa12.23□□□□□ -0.45
PDLIM2-217ENST00000491330 MORN3Q6PF18 240 aaPredicted RBP12.23□□□□□ -0.45
PDLIM2-217ENST00000491330 ZNF414Q96IQ9 312 aa12.23□□□□□ -0.45
PDLIM2-217ENST00000491330 RBKSQ9H477 322 aa12.23□□□□□ -0.45
PDLIM2-217ENST00000491330 PAIP2BQ9ULR5 123 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms