RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 ACOT7LQ6ZUV0 252 aa15.24■□□□□ 0.03
SHROOM3-209ENST00000490690 LILRB2Q8N423 598 aa15.24■□□□□ 0.03
SHROOM3-209ENST00000490690 OR2T35Q8NGX2 323 aa15.24■□□□□ 0.03
SHROOM3-209ENST00000490690 NPIPB3Q92617 1050 aa15.24■□□□□ 0.03
SHROOM3-209ENST00000490690 GINS3Q9BRX5 216 aa15.24■□□□□ 0.03
SHROOM3-209ENST00000490690 NPVFQ9HCQ7 196 aa15.24■□□□□ 0.03
SHROOM3-209ENST00000490690 FAM24AA6NFZ4 105 aa15.23■□□□□ 0.03
SHROOM3-209ENST00000490690 ZFP92A6NM28 416 aa15.23■□□□□ 0.03
SHROOM3-209ENST00000490690 PMS2P5A8MQ11 134 aa15.23■□□□□ 0.03
SHROOM3-209ENST00000490690 OR2C1O95371 312 aa15.23■□□□□ 0.03
SHROOM3-209ENST00000490690 BMI1P35226 326 aa15.23■□□□□ 0.03
SHROOM3-209ENST00000490690 SLC38A11Q08AI6 406 aa15.23■□□□□ 0.03
SHROOM3-209ENST00000490690 TMEM144Q7Z5S9 345 aa15.23■□□□□ 0.03
SHROOM3-209ENST00000490690 OR9G4Q8NGQ1 327 aa15.23■□□□□ 0.03
SHROOM3-209ENST00000490690 Q8WTZ3 238 aa15.23■□□□□ 0.03
SHROOM3-209ENST00000490690 DLX4Q92988 240 aaPredicted RBP15.23■□□□□ 0.03
SHROOM3-209ENST00000490690 MARC2Q969Z3 335 aa15.23■□□□□ 0.03
SHROOM3-209ENST00000490690 OR5AC2Q9NZP5 309 aa15.23■□□□□ 0.03
SHROOM3-209ENST00000490690 MBD2Q9UBB5 411 aa15.23■□□□□ 0.03
SHROOM3-209ENST00000490690 SMCO3A2RU48 225 aa15.22■□□□□ 0.03
SHROOM3-209ENST00000490690 A8MWP6 167 aa15.22■□□□□ 0.03
SHROOM3-209ENST00000490690 IGHV3-48P01763 117 aa15.22■□□□□ 0.03
SHROOM3-209ENST00000490690 IGLC1P0CG04 106 aa15.22■□□□□ 0.03
SHROOM3-209ENST00000490690 S100A7P31151 101 aa15.22■□□□□ 0.03
SHROOM3-209ENST00000490690 SYNJ2BPP57105 145 aa15.22■□□□□ 0.03
SHROOM3-209ENST00000490690 RAB31Q13636 194 aa15.22■□□□□ 0.03
SHROOM3-209ENST00000490690 C9orf66Q5T8R8 295 aa15.22■□□□□ 0.03
SHROOM3-209ENST00000490690 TRGV9Q99603 122 aa15.22■□□□□ 0.03
SHROOM3-209ENST00000490690 RNF126Q9BV68 326 aa15.22■□□□□ 0.03
SHROOM3-209ENST00000490690 ZC4H2Q9NQZ6 224 aa15.22■□□□□ 0.03
SHROOM3-209ENST00000490690 PFDN2Q9UHV9 154 aa15.22■□□□□ 0.03
SHROOM3-209ENST00000490690 H0YIZ8 118 aa15.21■□□□□ 0.03
SHROOM3-209ENST00000490690 RPL12P30050 165 aaKnown RBP15.21■□□□□ 0.03
SHROOM3-209ENST00000490690 ADMP35318 185 aa15.21■□□□□ 0.03
SHROOM3-209ENST00000490690 EWSR1Q01844 656 aaKnown RBP eCLIP15.21■□□□□ 0.03
SHROOM3-209ENST00000490690 MLANAQ16655 118 aa15.21■□□□□ 0.03
SHROOM3-209ENST00000490690 THAP8Q8NA92 274 aa15.21■□□□□ 0.03
SHROOM3-209ENST00000490690 INO80EQ8NBZ0 244 aaPredicted RBP15.21■□□□□ 0.03
SHROOM3-209ENST00000490690 CHAC2Q8WUX2 184 aa15.21■□□□□ 0.03
SHROOM3-209ENST00000490690 TMEM190Q8WZ59 177 aa15.21■□□□□ 0.03
SHROOM3-209ENST00000490690 WDR89Q96FK6 387 aaPredicted RBP15.21■□□□□ 0.03
SHROOM3-209ENST00000490690 CHRDL1Q9BU40 450 aa15.21■□□□□ 0.03
SHROOM3-209ENST00000490690 TMEM147Q9BVK8 224 aa15.21■□□□□ 0.03
SHROOM3-209ENST00000490690 DAZ1Q9NQZ3 744 aaKnown RBP15.21■□□□□ 0.03
SHROOM3-209ENST00000490690 UQCC1Q9NVA1 299 aa15.21■□□□□ 0.03
SHROOM3-209ENST00000490690 SIGLEC8Q9NYZ4 499 aa15.21■□□□□ 0.03
SHROOM3-209ENST00000490690 ZNF320A2RRD8 509 aa15.2■□□□□ 0.02
SHROOM3-209ENST00000490690 K7EMT4 169 aa15.2■□□□□ 0.02
SHROOM3-209ENST00000490690 DFFBO76075 338 aa15.2■□□□□ 0.02
SHROOM3-209ENST00000490690 CST7O76096 145 aa15.2■□□□□ 0.02
SHROOM3-209ENST00000490690 YIF1AO95070 293 aa15.2■□□□□ 0.02
SHROOM3-209ENST00000490690 SELENOTP62341 195 aa15.2■□□□□ 0.02
SHROOM3-209ENST00000490690 TEPPQ6URK8 271 aa15.2■□□□□ 0.02
SHROOM3-209ENST00000490690 S100A7AQ86SG5 101 aa15.2■□□□□ 0.02
SHROOM3-209ENST00000490690 TMEM217Q8N7C4 229 aa15.2■□□□□ 0.02
SHROOM3-209ENST00000490690 NARS2Q96I59 477 aaKnown RBP15.2■□□□□ 0.02
SHROOM3-209ENST00000490690 WNK1Q9H4A3 2382 aa15.2■□□□□ 0.02
SHROOM3-209ENST00000490690 IGSF23A1L1A6 192 aa15.19■□□□□ 0.02
SHROOM3-209ENST00000490690 MPDU1O75352 247 aa15.19■□□□□ 0.02
SHROOM3-209ENST00000490690 TOMM40O96008 361 aa15.19■□□□□ 0.02
SHROOM3-209ENST00000490690 IGKV1-17P01599 117 aa15.19■□□□□ 0.02
SHROOM3-209ENST00000490690 RD3LP0DJH9 198 aa15.19■□□□□ 0.02
SHROOM3-209ENST00000490690 SEC14L6B5MCN3 397 aa15.18■□□□□ 0.02
SHROOM3-209ENST00000490690 TIGITQ495A1 244 aa15.18■□□□□ 0.02
SHROOM3-209ENST00000490690 OR51G1Q8NGK1 321 aa15.18■□□□□ 0.02
SHROOM3-209ENST00000490690 OR5C1Q8NGR4 320 aa15.18■□□□□ 0.02
SHROOM3-209ENST00000490690 MRPL36Q9P0J6 103 aaKnown RBP15.18■□□□□ 0.02
SHROOM3-209ENST00000490690 MRPL27Q9P0M9 148 aaKnown RBP15.18■□□□□ 0.02
SHROOM3-209ENST00000490690 HSPB11Q9Y547 144 aa15.18■□□□□ 0.02
SHROOM3-209ENST00000490690 PUS1Q9Y606 427 aaKnown RBP eCLIP15.18■□□□□ 0.02
SHROOM3-209ENST00000490690 TRAV14DV4A0A0A6YYC5 116 aa15.17■□□□□ 0.02
SHROOM3-209ENST00000490690 VWC2Q2TAL6 325 aa15.17■□□□□ 0.02
SHROOM3-209ENST00000490690 ZNF546Q86UE3 836 aa15.17■□□□□ 0.02
SHROOM3-209ENST00000490690 BPIFCQ8NFQ6 507 aa15.17■□□□□ 0.02
SHROOM3-209ENST00000490690 AQP10Q96PS8 301 aa15.17■□□□□ 0.02
SHROOM3-209ENST00000490690 C20orf24Q9BUV8 137 aa15.17■□□□□ 0.02
SHROOM3-209ENST00000490690 TMEM231Q9H6L2 316 aa15.17■□□□□ 0.02
SHROOM3-209ENST00000490690 KCNIP2Q9NS61 270 aa15.17■□□□□ 0.02
SHROOM3-209ENST00000490690 A0A1W2PS18 150 aa15.16■□□□□ 0.02
SHROOM3-209ENST00000490690 SAP30O75446 220 aa15.16■□□□□ 0.02
SHROOM3-209ENST00000490690 CCNKO75909 580 aa15.16■□□□□ 0.02
SHROOM3-209ENST00000490690 CD5P06127 495 aa15.16■□□□□ 0.02
SHROOM3-209ENST00000490690 OR2K2Q8NGT1 345 aa15.16■□□□□ 0.02
SHROOM3-209ENST00000490690 METTL26Q96S19 204 aa15.16■□□□□ 0.02
SHROOM3-209ENST00000490690 TECRQ9NZ01 308 aaKnown RBP15.16■□□□□ 0.02
SHROOM3-209ENST00000490690 RNF24Q9Y225 148 aa15.16■□□□□ 0.02
SHROOM3-209ENST00000490690 FXYD6-FXYD2A0A087WZ82 144 aa15.15■□□□□ 0.02
SHROOM3-209ENST00000490690 WIPF1O43516 503 aa15.15■□□□□ 0.02
SHROOM3-209ENST00000490690 IFNA5P01569 189 aa15.15■□□□□ 0.02
SHROOM3-209ENST00000490690 AP2S1P53680 142 aaPredicted RBP15.15■□□□□ 0.02
SHROOM3-209ENST00000490690 NHLH2Q02577 135 aa15.15■□□□□ 0.02
SHROOM3-209ENST00000490690 ARL16Q0P5N6 197 aa15.15■□□□□ 0.02
SHROOM3-209ENST00000490690 ZNF266Q14584 549 aa15.15■□□□□ 0.02
SHROOM3-209ENST00000490690 PXDC1Q5TGL8 231 aa15.15■□□□□ 0.02
SHROOM3-209ENST00000490690 TOMM20LQ6UXN7 152 aa15.15■□□□□ 0.02
SHROOM3-209ENST00000490690 AKAP14Q86UN6 197 aa15.15■□□□□ 0.02
SHROOM3-209ENST00000490690 HAPLN4Q86UW8 402 aa15.15■□□□□ 0.02
SHROOM3-209ENST00000490690 ATP5SQ99766 215 aa15.15■□□□□ 0.02
SHROOM3-209ENST00000490690 IGHV3-35A0A0C4DH35 117 aa15.14■□□□□ 0.01
SHROOM3-209ENST00000490690 C2orf70A6NJV1 201 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms