RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 RND2P52198 227 aa20.35■□□□□ 0.85
HOXB3-211ENST00000490677 RBMS2Q15434 407 aaKnown RBP20.35■□□□□ 0.85
HOXB3-211ENST00000490677 CEMP1Q6PRD7 247 aaPredicted RBP20.35■□□□□ 0.85
HOXB3-211ENST00000490677 GATAD1Q8WUU5 269 aa20.35■□□□□ 0.85
HOXB3-211ENST00000490677 TMEM231Q9H6L2 316 aa20.35■□□□□ 0.85
HOXB3-211ENST00000490677 RPS10-NUDT3A0A1W2PQS6 291 aa20.34■□□□□ 0.85
HOXB3-211ENST00000490677 NUPR2A6NF83 97 aa20.34■□□□□ 0.85
HOXB3-211ENST00000490677 DNASE2O00115 360 aaPredicted RBP20.34■□□□□ 0.85
HOXB3-211ENST00000490677 SULT1A3P0DMM9 295 aa20.34■□□□□ 0.85
HOXB3-211ENST00000490677 SULT1A4P0DMN0 295 aa20.34■□□□□ 0.85
HOXB3-211ENST00000490677 DCANP1Q8TF63 244 aa20.34■□□□□ 0.85
HOXB3-211ENST00000490677 TRIM63Q969Q1 353 aa20.34■□□□□ 0.85
HOXB3-211ENST00000490677 SCP2D1Q9UJQ7 156 aa20.34■□□□□ 0.85
HOXB3-211ENST00000490677 FRAS1Q86XX4 4008 aa20.34■□□□□ 0.85
HOXB3-211ENST00000490677 VPS13DQ5THJ4 4388 aa20.33■□□□□ 0.85
HOXB3-211ENST00000490677 A0A1W2PS18 150 aa20.33■□□□□ 0.85
HOXB3-211ENST00000490677 FABP12A6NFH5 140 aa20.33■□□□□ 0.85
HOXB3-211ENST00000490677 CEBPZOSA8MTT3 80 aa20.33■□□□□ 0.85
HOXB3-211ENST00000490677 SLC25A4P12235 298 aa20.33■□□□□ 0.85
HOXB3-211ENST00000490677 RPL11P62913 178 aaKnown RBP20.33■□□□□ 0.85
HOXB3-211ENST00000490677 LYZL2Q7Z4W2 148 aa20.33■□□□□ 0.85
HOXB3-211ENST00000490677 OR1S2Q8NGQ3 325 aa20.33■□□□□ 0.85
HOXB3-211ENST00000490677 HSPB7Q9UBY9 170 aa20.33■□□□□ 0.85
HOXB3-211ENST00000490677 A0A0B4J2A0 478 aa20.32■□□□□ 0.84
HOXB3-211ENST00000490677 GIG44P09565 113 aaPredicted RBP20.32■□□□□ 0.84
HOXB3-211ENST00000490677 YPEL3P61236 119 aaPredicted RBP20.32■□□□□ 0.84
HOXB3-211ENST00000490677 KLF9Q13886 244 aaPredicted RBP20.32■□□□□ 0.84
HOXB3-211ENST00000490677 MCFD2Q8NI22 146 aa20.32■□□□□ 0.84
HOXB3-211ENST00000490677 RARRES2Q99969 163 aa20.32■□□□□ 0.84
HOXB3-211ENST00000490677 SHPKQ9UHJ6 478 aa20.32■□□□□ 0.84
HOXB3-211ENST00000490677 RABAC1Q9UI14 185 aa20.32■□□□□ 0.84
HOXB3-211ENST00000490677 KCNIP3Q9Y2W7 256 aa20.32■□□□□ 0.84
HOXB3-211ENST00000490677 NPY1RP25929 384 aa20.31■□□□□ 0.84
HOXB3-211ENST00000490677 OR10J1P30954 320 aa20.31■□□□□ 0.84
HOXB3-211ENST00000490677 GLMPQ8WWB7 406 aa20.31■□□□□ 0.84
HOXB3-211ENST00000490677 GRAMD2BQ96HH9 432 aa20.31■□□□□ 0.84
HOXB3-211ENST00000490677 MCUBQ9NWR8 336 aa20.31■□□□□ 0.84
HOXB3-211ENST00000490677 CA1P00915 261 aaPredicted RBP20.3■□□□□ 0.84
HOXB3-211ENST00000490677 AKR1C4P17516 323 aa20.3■□□□□ 0.84
HOXB3-211ENST00000490677 USF2Q15853 346 aaPredicted RBP20.3■□□□□ 0.84
HOXB3-211ENST00000490677 TRPT1Q86TN4 253 aaKnown RBP20.3■□□□□ 0.84
HOXB3-211ENST00000490677 STXBP6Q8NFX7 210 aa20.3■□□□□ 0.84
HOXB3-211ENST00000490677 OR11H2Q8NH07 326 aa20.3■□□□□ 0.84
HOXB3-211ENST00000490677 SCGB3A2Q96PL1 93 aa20.3■□□□□ 0.84
HOXB3-211ENST00000490677 C11orf68Q9H3H3 251 aaKnown RBP20.3■□□□□ 0.84
HOXB3-211ENST00000490677 V9GYH0 126 aa20.3■□□□□ 0.84
HOXB3-211ENST00000490677 SCGB2A1O75556 95 aa20.29■□□□□ 0.84
HOXB3-211ENST00000490677 CCR6P51684 374 aa20.29■□□□□ 0.84
HOXB3-211ENST00000490677 SMCO1Q147U7 214 aa20.29■□□□□ 0.84
HOXB3-211ENST00000490677 C16orf54Q6UWD8 224 aa20.29■□□□□ 0.84
HOXB3-211ENST00000490677 TMEM217Q8N7C4 229 aa20.29■□□□□ 0.84
HOXB3-211ENST00000490677 NPIPB3Q92617 1050 aa20.29■□□□□ 0.84
HOXB3-211ENST00000490677 CACFD1Q9UGQ2 172 aa20.29■□□□□ 0.84
HOXB3-211ENST00000490677 ZNF79Q15937 498 aa20.28■□□□□ 0.84
HOXB3-211ENST00000490677 RBKSQ9H477 322 aa20.28■□□□□ 0.84
HOXB3-211ENST00000490677 ZNF688P0C7X2 276 aa20.27■□□□□ 0.84
HOXB3-211ENST00000490677 Q8WTZ3 238 aa20.27■□□□□ 0.84
HOXB3-211ENST00000490677 NOL3O60936 208 aaKnown RBP20.26■□□□□ 0.83
HOXB3-211ENST00000490677 PITX3O75364 302 aa20.26■□□□□ 0.83
HOXB3-211ENST00000490677 HNRNPCP07910 306 aaKnown RBP eCLIP20.26■□□□□ 0.83
HOXB3-211ENST00000490677 ETFRF1Q6IPR1 90 aa20.26■□□□□ 0.83
HOXB3-211ENST00000490677 DTD1Q8TEA8 209 aa20.26■□□□□ 0.83
HOXB3-211ENST00000490677 PHLDA1Q8WV24 401 aaPredicted RBP20.26■□□□□ 0.83
HOXB3-211ENST00000490677 U3KQ87 197 aa20.26■□□□□ 0.83
HOXB3-211ENST00000490677 DNAH10Q8IVF4 4471 aa20.25■□□□□ 0.83
HOXB3-211ENST00000490677 DNAH6Q9C0G6 4158 aa20.25■□□□□ 0.83
HOXB3-211ENST00000490677 TOMM40O96008 361 aa20.25■□□□□ 0.83
HOXB3-211ENST00000490677 IL4P05112 153 aa20.25■□□□□ 0.83
HOXB3-211ENST00000490677 STHQ8IWL8 128 aa20.25■□□□□ 0.83
HOXB3-211ENST00000490677 LGI3Q8N145 548 aa20.25■□□□□ 0.83
HOXB3-211ENST00000490677 ACY3Q96HD9 319 aa20.25■□□□□ 0.83
HOXB3-211ENST00000490677 KNCNA6PVL3 124 aa20.24■□□□□ 0.83
HOXB3-211ENST00000490677 LY6G6CO95867 125 aa20.24■□□□□ 0.83
HOXB3-211ENST00000490677 IFNA10P01566 189 aa20.24■□□□□ 0.83
HOXB3-211ENST00000490677 C4BPBP20851 252 aa20.24■□□□□ 0.83
HOXB3-211ENST00000490677 NOXA1Q86UR1 476 aa20.24■□□□□ 0.83
HOXB3-211ENST00000490677 Q8NAQ8 132 aa20.24■□□□□ 0.83
HOXB3-211ENST00000490677 NARS2Q96I59 477 aaKnown RBP20.24■□□□□ 0.83
HOXB3-211ENST00000490677 IGKV1D-37A0A075B6S9 117 aa20.23■□□□□ 0.83
HOXB3-211ENST00000490677 BUB3O43684 328 aa20.23■□□□□ 0.83
HOXB3-211ENST00000490677 PSG1P11464 419 aa20.23■□□□□ 0.83
HOXB3-211ENST00000490677 NANOS2P60321 138 aaKnown RBP20.23■□□□□ 0.83
HOXB3-211ENST00000490677 SRPXP78539 464 aa20.23■□□□□ 0.83
HOXB3-211ENST00000490677 KLK5Q9Y337 293 aaPredicted RBP20.23■□□□□ 0.83
HOXB3-211ENST00000490677 HELTA6NFD8 242 aa20.22■□□□□ 0.83
HOXB3-211ENST00000490677 DEFB4AO15263 64 aa20.22■□□□□ 0.83
HOXB3-211ENST00000490677 LRTM2Q8N967 370 aa20.22■□□□□ 0.83
HOXB3-211ENST00000490677 RBM38Q9H0Z9 239 aaKnown RBP20.22■□□□□ 0.83
HOXB3-211ENST00000490677 RD3LP0DJH9 198 aa20.21■□□□□ 0.83
HOXB3-211ENST00000490677 ANXA3P12429 323 aa20.21■□□□□ 0.83
HOXB3-211ENST00000490677 DHRS2Q13268 280 aa20.21■□□□□ 0.83
HOXB3-211ENST00000490677 PYDC2Q56P42 97 aa20.21■□□□□ 0.83
HOXB3-211ENST00000490677 TMEM128Q5BJH2 165 aa20.21■□□□□ 0.83
HOXB3-211ENST00000490677 CCDC190Q86UF4 302 aa20.21■□□□□ 0.83
HOXB3-211ENST00000490677 DUXBA0A1W2PPF3 345 aa20.2■□□□□ 0.82
HOXB3-211ENST00000490677 FAUP35544 74 aaKnown RBP20.2■□□□□ 0.82
HOXB3-211ENST00000490677 GAMTQ14353 236 aa20.2■□□□□ 0.82
HOXB3-211ENST00000490677 TMED4Q7Z7H5 227 aa20.2■□□□□ 0.82
HOXB3-211ENST00000490677 TOMM5Q8N4H5 51 aa20.2■□□□□ 0.82
HOXB3-211ENST00000490677 CSNK1G2-AS1Q8NCQ2 148 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms