RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 SLC35E1Q96K37 410 aa12.3□□□□□ -0.44
PCCB-218ENST00000490504 AREGP15514 252 aa12.29□□□□□ -0.44
PCCB-218ENST00000490504 M6PRP20645 277 aa12.29□□□□□ -0.44
PCCB-218ENST00000490504 GAMTQ14353 236 aa12.29□□□□□ -0.44
PCCB-218ENST00000490504 PEA15Q15121 130 aa12.29□□□□□ -0.44
PCCB-218ENST00000490504 RPP25LQ8N5L8 163 aaKnown RBP12.29□□□□□ -0.44
PCCB-218ENST00000490504 OR1P1Q8NH06 330 aa12.29□□□□□ -0.44
PCCB-218ENST00000490504 PRSS22Q9GZN4 317 aa12.29□□□□□ -0.44
PCCB-218ENST00000490504 PXMP4Q9Y6I8 212 aa12.29□□□□□ -0.44
PCCB-218ENST00000490504 CTXND1A0A1B0GTU2 59 aa12.29□□□□□ -0.44
PCCB-218ENST00000490504 NCBP2LA6PVI3 153 aaKnown RBP12.29□□□□□ -0.44
PCCB-218ENST00000490504 CCL20P78556 96 aa12.29□□□□□ -0.44
PCCB-218ENST00000490504 SSX7Q7RTT5 188 aa12.29□□□□□ -0.44
PCCB-218ENST00000490504 CCDC28AQ8IWP9 274 aa12.29□□□□□ -0.44
PCCB-218ENST00000490504 ABHD5Q8WTS1 349 aa12.29□□□□□ -0.44
PCCB-218ENST00000490504 SCRT1Q9BWW7 348 aa12.29□□□□□ -0.44
PCCB-218ENST00000490504 ACTR3CQ9C0K3 210 aaPredicted RBP12.29□□□□□ -0.44
PCCB-218ENST00000490504 EIF5A2Q9GZV4 153 aaKnown RBP12.29□□□□□ -0.44
PCCB-218ENST00000490504 SLC39A9Q9NUM3 307 aa12.29□□□□□ -0.44
PCCB-218ENST00000490504 NOTCH1P46531 2555 aa12.28□□□□□ -0.44
PCCB-218ENST00000490504 MAP1LC3B2A6NCE7 125 aa12.28□□□□□ -0.44
PCCB-218ENST00000490504 CORTO00230 105 aa12.28□□□□□ -0.44
PCCB-218ENST00000490504 CYB5BO43169 146 aa12.28□□□□□ -0.44
PCCB-218ENST00000490504 RPL29P47914 159 aaKnown RBP12.28□□□□□ -0.44
PCCB-218ENST00000490504 FXYD3Q14802 87 aa12.28□□□□□ -0.44
PCCB-218ENST00000490504 TMEM95Q3KNT9 176 aa12.28□□□□□ -0.44
PCCB-218ENST00000490504 MIC13Q5XKP0 118 aa12.28□□□□□ -0.44
PCCB-218ENST00000490504 ETFRF1Q6IPR1 90 aa12.28□□□□□ -0.44
PCCB-218ENST00000490504 LCN15Q6UWW0 184 aa12.28□□□□□ -0.44
PCCB-218ENST00000490504 MAP1LC3BQ9GZQ8 125 aa12.28□□□□□ -0.44
PCCB-218ENST00000490504 F11RQ9Y624 299 aaKnown RBP12.28□□□□□ -0.44
PCCB-218ENST00000490504 YIF1AO95070 293 aa12.27□□□□□ -0.44
PCCB-218ENST00000490504 APELAP0DMC3 54 aa12.27□□□□□ -0.44
PCCB-218ENST00000490504 CD28P10747 220 aa12.27□□□□□ -0.44
PCCB-218ENST00000490504 FAM122CQ6P4D5 195 aa12.27□□□□□ -0.44
PCCB-218ENST00000490504 ZNF562Q6V9R5 426 aa12.27□□□□□ -0.44
PCCB-218ENST00000490504 WIPF2Q8TF74 440 aaPredicted RBP12.27□□□□□ -0.44
PCCB-218ENST00000490504 WNT10AQ9GZT5 417 aa12.27□□□□□ -0.44
PCCB-218ENST00000490504 SMDT1Q9H4I9 107 aa12.27□□□□□ -0.44
PCCB-218ENST00000490504 FNDC4Q9H6D8 234 aaPredicted RBP12.27□□□□□ -0.44
PCCB-218ENST00000490504 SLC25A22Q9H936 323 aa12.27□□□□□ -0.44
PCCB-218ENST00000490504 RBFOX3A6NFN3 312 aa12.26□□□□□ -0.45
PCCB-218ENST00000490504 SEC14L6B5MCN3 397 aa12.26□□□□□ -0.45
PCCB-218ENST00000490504 MFAP2P55001 183 aa12.26□□□□□ -0.45
PCCB-218ENST00000490504 B2MP61769 119 aa12.26□□□□□ -0.45
PCCB-218ENST00000490504 MLANAQ16655 118 aa12.26□□□□□ -0.45
PCCB-218ENST00000490504 STPG3Q8N7X2 389 aa12.26□□□□□ -0.45
PCCB-218ENST00000490504 MISP3Q96FF7 219 aa12.26□□□□□ -0.45
PCCB-218ENST00000490504 ACY3Q96HD9 319 aa12.26□□□□□ -0.45
PCCB-218ENST00000490504 SLC45A2Q9UMX9 530 aa12.26□□□□□ -0.45
PCCB-218ENST00000490504 F8W036 122 aa12.26□□□□□ -0.45
PCCB-218ENST00000490504 SFTA3P0C7M3 94 aa12.26□□□□□ -0.45
PCCB-218ENST00000490504 CDC34P49427 236 aaPredicted RBP12.26□□□□□ -0.45
PCCB-218ENST00000490504 C10orf91Q5T1B1 145 aa12.26□□□□□ -0.45
PCCB-218ENST00000490504 Q8N9W7 124 aa12.26□□□□□ -0.45
PCCB-218ENST00000490504 ARPC1AQ92747 370 aa12.26□□□□□ -0.45
PCCB-218ENST00000490504 RBM14Q96PK6 669 aaKnown RBP12.26□□□□□ -0.45
PCCB-218ENST00000490504 SLC25A33Q9BSK2 321 aa12.26□□□□□ -0.45
PCCB-218ENST00000490504 SEC11CQ9BY50 192 aa12.26□□□□□ -0.45
PCCB-218ENST00000490504 IGKV1OR2-108A0A075B7D4 117 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 SH2D7A6NKC9 451 aaPredicted RBP12.25□□□□□ -0.45
PCCB-218ENST00000490504 C9JQL5 133 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 APOC3P02656 99 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 CRYGCP07315 174 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 CTRB1P17538 263 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 ADCYAP1P18509 176 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 OR10J1P30954 320 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 FGF8P55075 233 aaPredicted RBP12.25□□□□□ -0.45
PCCB-218ENST00000490504 CX3CL1P78423 397 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 PRR20EP86478 221 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 PRR20CP86479 221 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 PRR20DP86480 221 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 PRR20BP86481 221 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 PRR20AP86496 221 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 GCSAMLQ5JQS6 135 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 ZNF506Q5JVG8 444 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 CTRB2Q6GPI1 263 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 C19orf35Q6ZS72 473 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 C16orf82Q7Z2V1 217 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 THAP8Q8NA92 274 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 OR1L6Q8NGR2 347 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 RAB24Q969Q5 203 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 RASL11BQ9BPW5 248 aa12.25□□□□□ -0.45
PCCB-218ENST00000490504 PRKDCP78527 4128 aaKnown RBP12.25□□□□□ -0.45
PCCB-218ENST00000490504 IFNA1P01562 189 aa12.24□□□□□ -0.45
PCCB-218ENST00000490504 HLA-DRB1P01911 266 aa12.24□□□□□ -0.45
PCCB-218ENST00000490504 AMY1AP04745 511 aa12.24□□□□□ -0.45
PCCB-218ENST00000490504 PMS2P11Q13670 270 aa12.24□□□□□ -0.45
PCCB-218ENST00000490504 HAGHQ16775 308 aa12.24□□□□□ -0.45
PCCB-218ENST00000490504 NSUN5P1Q3KNT7 163 aa12.24□□□□□ -0.45
PCCB-218ENST00000490504 C1QL4Q86Z23 238 aa12.24□□□□□ -0.45
PCCB-218ENST00000490504 CITED2Q99967 270 aaPredicted RBP12.24□□□□□ -0.45
PCCB-218ENST00000490504 RARRES2Q99969 163 aa12.24□□□□□ -0.45
PCCB-218ENST00000490504 GNG13Q9P2W3 67 aa12.24□□□□□ -0.45
PCCB-218ENST00000490504 CARHSP1Q9Y2V2 147 aaKnown RBP12.24□□□□□ -0.45
PCCB-218ENST00000490504 A0A1W2PPV4 95 aa12.23□□□□□ -0.45
PCCB-218ENST00000490504 LINC00869P0C866 280 aa12.23□□□□□ -0.45
PCCB-218ENST00000490504 PPT1P50897 306 aa12.23□□□□□ -0.45
PCCB-218ENST00000490504 NDPQ00604 133 aa12.23□□□□□ -0.45
PCCB-218ENST00000490504 CYP2G1PQ6ZSU1 146 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms