RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 PRSS54Q6PEW0 395 aa14.66□□□□□ -0.06
SMC4-222ENST00000490207 METTL26Q96S19 204 aa14.66□□□□□ -0.06
SMC4-222ENST00000490207 PAFAH1B2P68402 229 aa14.65□□□□□ -0.06
SMC4-222ENST00000490207 RBMS2Q15434 407 aaKnown RBP14.65□□□□□ -0.06
SMC4-222ENST00000490207 CENPSQ8N2Z9 138 aa14.65□□□□□ -0.06
SMC4-222ENST00000490207 GBGT1Q8N5D6 347 aa14.65□□□□□ -0.06
SMC4-222ENST00000490207 U3KQ87 197 aa14.65□□□□□ -0.06
SMC4-222ENST00000490207 IGLC1P0CG04 106 aa14.64□□□□□ -0.07
SMC4-222ENST00000490207 NPPCP23582 126 aa14.64□□□□□ -0.07
SMC4-222ENST00000490207 OR10J1P30954 320 aa14.64□□□□□ -0.07
SMC4-222ENST00000490207 PPP1R1AQ13522 171 aa14.64□□□□□ -0.07
SMC4-222ENST00000490207 APRG1Q8IVJ8 170 aa14.64□□□□□ -0.07
SMC4-222ENST00000490207 LRTM2Q8N967 370 aa14.64□□□□□ -0.07
SMC4-222ENST00000490207 OVOL2Q9BRP0 275 aa14.64□□□□□ -0.07
SMC4-222ENST00000490207 MAP6D1Q9H9H5 199 aa14.64□□□□□ -0.07
SMC4-222ENST00000490207 A0A1W2PS18 150 aa14.63□□□□□ -0.07
SMC4-222ENST00000490207 DFFBO76075 338 aa14.63□□□□□ -0.07
SMC4-222ENST00000490207 SFT2D2O95562 160 aa14.63□□□□□ -0.07
SMC4-222ENST00000490207 RPL35AP18077 110 aaKnown RBP14.63□□□□□ -0.07
SMC4-222ENST00000490207 CMC4P56277 68 aaPredicted RBP14.63□□□□□ -0.07
SMC4-222ENST00000490207 BAK1Q16611 211 aa14.63□□□□□ -0.07
SMC4-222ENST00000490207 LILRB2Q8N423 598 aa14.63□□□□□ -0.07
SMC4-222ENST00000490207 ACY3Q96HD9 319 aa14.63□□□□□ -0.07
SMC4-222ENST00000490207 NARS2Q96I59 477 aaKnown RBP14.63□□□□□ -0.07
SMC4-222ENST00000490207 MS4A6AQ9H2W1 248 aa14.63□□□□□ -0.07
SMC4-222ENST00000490207 NAP1L6A6NFF2 107 aa14.62□□□□□ -0.07
SMC4-222ENST00000490207 DNASE2O00115 360 aaPredicted RBP14.62□□□□□ -0.07
SMC4-222ENST00000490207 PITX3O75364 302 aa14.62□□□□□ -0.07
SMC4-222ENST00000490207 CRYBB3P26998 211 aa14.62□□□□□ -0.07
SMC4-222ENST00000490207 RPL11P62913 178 aaKnown RBP14.62□□□□□ -0.07
SMC4-222ENST00000490207 ZNF124Q15973 351 aa14.62□□□□□ -0.07
SMC4-222ENST00000490207 WFDC3Q8IUB2 231 aa14.62□□□□□ -0.07
SMC4-222ENST00000490207 SACSQ9NZJ4 4579 aa14.61□□□□□ -0.07
SMC4-222ENST00000490207 KIR2DL5BA0A0G2JN68 375 aa14.61□□□□□ -0.07
SMC4-222ENST00000490207 KIR2DL5BA0A0G2JPC4 375 aa14.61□□□□□ -0.07
SMC4-222ENST00000490207 UBE2CO00762 179 aa14.61□□□□□ -0.07
SMC4-222ENST00000490207 SLC25A6P12236 298 aa14.61□□□□□ -0.07
SMC4-222ENST00000490207 P2RY1P47900 373 aa14.61□□□□□ -0.07
SMC4-222ENST00000490207 UBE2MP61081 183 aaKnown RBP14.61□□□□□ -0.07
SMC4-222ENST00000490207 YPEL3P61236 119 aaPredicted RBP14.61□□□□□ -0.07
SMC4-222ENST00000490207 DEFB135Q30KP9 77 aa14.61□□□□□ -0.07
SMC4-222ENST00000490207 Q6ZWC4 215 aa14.61□□□□□ -0.07
SMC4-222ENST00000490207 KIR2DL5AQ8N109 375 aa14.61□□□□□ -0.07
SMC4-222ENST00000490207 STPG3Q8N7X2 389 aa14.61□□□□□ -0.07
SMC4-222ENST00000490207 KIR2DL5BQ8NHK3 375 aa14.61□□□□□ -0.07
SMC4-222ENST00000490207 Q8WTZ3 238 aa14.61□□□□□ -0.07
SMC4-222ENST00000490207 NPIPB3Q92617 1050 aa14.61□□□□□ -0.07
SMC4-222ENST00000490207 SDHCQ99643 169 aaPredicted RBP14.61□□□□□ -0.07
SMC4-222ENST00000490207 LYSTQ99698 3801 aa14.61□□□□□ -0.07
SMC4-222ENST00000490207 TP53TG1Q9Y2A0 90 aa14.61□□□□□ -0.07
SMC4-222ENST00000490207 TMED3Q9Y3Q3 217 aa14.61□□□□□ -0.07
SMC4-222ENST00000490207 TRAV2A0A0B4J234 112 aa14.6□□□□□ -0.07
SMC4-222ENST00000490207 FAM90A26D6RGX4 464 aa14.6□□□□□ -0.07
SMC4-222ENST00000490207 IFNA4P05014 189 aa14.6□□□□□ -0.07
SMC4-222ENST00000490207 IAPPP10997 89 aa14.6□□□□□ -0.07
SMC4-222ENST00000490207 ATP5IP56385 69 aaPredicted RBP14.6□□□□□ -0.07
SMC4-222ENST00000490207 IL17DQ8TAD2 202 aa14.6□□□□□ -0.07
SMC4-222ENST00000490207 GRAMD2BQ96HH9 432 aa14.6□□□□□ -0.07
SMC4-222ENST00000490207 RABAC1Q9UI14 185 aa14.6□□□□□ -0.07
SMC4-222ENST00000490207 LINC00854A0A1B0GVQ3 168 aa14.59□□□□□ -0.07
SMC4-222ENST00000490207 SPRY2O43597 315 aa14.59□□□□□ -0.07
SMC4-222ENST00000490207 NDUFB6O95139 128 aa14.59□□□□□ -0.07
SMC4-222ENST00000490207 TOMM40O96008 361 aa14.59□□□□□ -0.07
SMC4-222ENST00000490207 HNRNPCP07910 306 aaKnown RBP eCLIP14.59□□□□□ -0.07
SMC4-222ENST00000490207 HOXB5P09067 269 aa14.59□□□□□ -0.07
SMC4-222ENST00000490207 STXBP6Q8NFX7 210 aa14.59□□□□□ -0.07
SMC4-222ENST00000490207 NDUFA13Q9P0J0 144 aa14.59□□□□□ -0.07
SMC4-222ENST00000490207 MED6O75586 246 aa14.58□□□□□ -0.08
SMC4-222ENST00000490207 IL4P05112 153 aa14.58□□□□□ -0.08
SMC4-222ENST00000490207 FAM24BQ8N5W8 94 aa14.58□□□□□ -0.08
SMC4-222ENST00000490207 SLC35E1Q96K37 410 aa14.58□□□□□ -0.08
SMC4-222ENST00000490207 CENPXA8MT69 81 aa14.57□□□□□ -0.08
SMC4-222ENST00000490207 DEFB131AP59861 70 aa14.57□□□□□ -0.08
SMC4-222ENST00000490207 RAB11AP62491 216 aa14.57□□□□□ -0.08
SMC4-222ENST00000490207 USF2Q15853 346 aaPredicted RBP14.57□□□□□ -0.08
SMC4-222ENST00000490207 GGNBP1Q5YKI7 109 aa14.57□□□□□ -0.08
SMC4-222ENST00000490207 C7orf50Q9BRJ6 194 aaKnown RBP14.57□□□□□ -0.08
SMC4-222ENST00000490207 U3KQE9 123 aa14.57□□□□□ -0.08
SMC4-222ENST00000490207 C9orf170A2RU37 121 aa14.56□□□□□ -0.08
SMC4-222ENST00000490207 RD3LP0DJH9 198 aa14.56□□□□□ -0.08
SMC4-222ENST00000490207 IL7P13232 177 aa14.56□□□□□ -0.08
SMC4-222ENST00000490207 BTCP35070 178 aa14.56□□□□□ -0.08
SMC4-222ENST00000490207 GPX4P36969 197 aaPredicted RBP14.56□□□□□ -0.08
SMC4-222ENST00000490207 EIF2B2P49770 351 aaKnown RBP14.56□□□□□ -0.08
SMC4-222ENST00000490207 LEMD1Q68G75 181 aa14.56□□□□□ -0.08
SMC4-222ENST00000490207 RNF183Q96D59 192 aa14.56□□□□□ -0.08
SMC4-222ENST00000490207 CIB3Q96Q77 187 aaPredicted RBP14.56□□□□□ -0.08
SMC4-222ENST00000490207 PAIP2BQ9ULR5 123 aaKnown RBP14.56□□□□□ -0.08
SMC4-222ENST00000490207 FLVCR2Q9UPI3 526 aa14.56□□□□□ -0.08
SMC4-222ENST00000490207 ZFP92A6NM28 416 aa14.55□□□□□ -0.08
SMC4-222ENST00000490207 K7EQG2 157 aa14.55□□□□□ -0.08
SMC4-222ENST00000490207 PSG1P11464 419 aa14.55□□□□□ -0.08
SMC4-222ENST00000490207 GAMTQ14353 236 aa14.55□□□□□ -0.08
SMC4-222ENST00000490207 C16orf54Q6UWD8 224 aa14.55□□□□□ -0.08
SMC4-222ENST00000490207 GLMPQ8WWB7 406 aa14.55□□□□□ -0.08
SMC4-222ENST00000490207 MAGT1Q9H0U3 335 aa14.55□□□□□ -0.08
SMC4-222ENST00000490207 CSTL1Q9H114 145 aa14.55□□□□□ -0.08
SMC4-222ENST00000490207 A0A0J9YWU9 116 aa14.54□□□□□ -0.08
SMC4-222ENST00000490207 HELTA6NFD8 242 aa14.54□□□□□ -0.08
SMC4-222ENST00000490207 MPTX1A8MV57 137 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms