RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 C20orf24Q9BUV8 137 aa9.29□□□□□ -0.92
TRIM40-208ENST00000489892 NAT8Q9UHE5 227 aa9.29□□□□□ -0.92
TRIM40-208ENST00000489892 ZFP92A6NM28 416 aa9.28□□□□□ -0.92
TRIM40-208ENST00000489892 INAFM1C9JVW0 142 aa9.28□□□□□ -0.92
TRIM40-208ENST00000489892 FNDC10F2Z333 226 aa9.28□□□□□ -0.92
TRIM40-208ENST00000489892 H3BUX3 64 aa9.28□□□□□ -0.92
TRIM40-208ENST00000489892 FGF7P21781 194 aa9.28□□□□□ -0.92
TRIM40-208ENST00000489892 CD24P25063 80 aa9.28□□□□□ -0.92
TRIM40-208ENST00000489892 CNTFRP26992 372 aa9.28□□□□□ -0.92
TRIM40-208ENST00000489892 MEF2BQ02080 365 aaPredicted RBP9.28□□□□□ -0.92
TRIM40-208ENST00000489892 FXYD3Q14802 87 aa9.28□□□□□ -0.92
TRIM40-208ENST00000489892 OR8G2PQ6IF36 304 aa9.28□□□□□ -0.92
TRIM40-208ENST00000489892 ETV3LQ6ZN32 361 aa9.28□□□□□ -0.92
TRIM40-208ENST00000489892 TMEM86BQ8N661 226 aa9.28□□□□□ -0.92
TRIM40-208ENST00000489892 RNASEH2CQ8TDP1 164 aaKnown RBP9.28□□□□□ -0.92
TRIM40-208ENST00000489892 C2CD4CQ8TF44 421 aa9.28□□□□□ -0.92
TRIM40-208ENST00000489892 PRDM13Q9H4Q3 707 aa9.28□□□□□ -0.92
TRIM40-208ENST00000489892 SDF2L1Q9HCN8 221 aa9.28□□□□□ -0.92
TRIM40-208ENST00000489892 YAE1D1Q9NRH1 226 aa9.28□□□□□ -0.92
TRIM40-208ENST00000489892 TPSG1Q9NRR2 321 aa9.28□□□□□ -0.92
TRIM40-208ENST00000489892 ELOA3CA0A087WX78 387 aaPredicted RBP9.27□□□□□ -0.93
TRIM40-208ENST00000489892 A6NDX4 124 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 C15orf62A8K5M9 175 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 SEC14L6B5MCN3 397 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 MDKP21741 143 aaPredicted RBP9.27□□□□□ -0.93
TRIM40-208ENST00000489892 AKR1C3P42330 323 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 SNRPEP62304 92 aaKnown RBP9.27□□□□□ -0.93
TRIM40-208ENST00000489892 ELOBQ15370 118 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 ZNF726P1Q15940 193 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 DEFB112Q30KQ8 113 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 BSXQ3C1V8 233 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 SPINK9Q5DT21 86 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 FAM120AOSQ5T036 256 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 ETFRF1Q6IPR1 90 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 LCN15Q6UWW0 184 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 ZFP82Q8N141 532 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 C5orf56Q8N8D9 126 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 Q8N9W7 124 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 OR10G9Q8NGN4 311 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 OR10G7Q8NGN6 311 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 OR1P1Q8NH06 330 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 ABHD5Q8WTS1 349 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 CACNG8Q8WXS5 425 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 C22orf15Q8WYQ4 148 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 ISOC2Q96AB3 205 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 NPCDR1Q9BY65 106 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 WDR83OSQ9Y284 106 aa9.27□□□□□ -0.93
TRIM40-208ENST00000489892 TRBV24-1A0A075B6N3 115 aa9.26□□□□□ -0.93
TRIM40-208ENST00000489892 IGLC7A0M8Q6 106 aa9.26□□□□□ -0.93
TRIM40-208ENST00000489892 ZNF727A8MUV8 499 aa9.26□□□□□ -0.93
TRIM40-208ENST00000489892 F6UZH7 168 aa9.26□□□□□ -0.93
TRIM40-208ENST00000489892 IER3P46695 156 aa9.26□□□□□ -0.93
TRIM40-208ENST00000489892 RPS10P46783 165 aaKnown RBP9.26□□□□□ -0.93
TRIM40-208ENST00000489892 CDC34P49427 236 aaPredicted RBP9.26□□□□□ -0.93
TRIM40-208ENST00000489892 ELLP55199 621 aaPredicted RBP9.26□□□□□ -0.93
TRIM40-208ENST00000489892 CX3CL1P78423 397 aa9.26□□□□□ -0.93
TRIM40-208ENST00000489892 FFAR4Q5NUL3 377 aa9.26□□□□□ -0.93
TRIM40-208ENST00000489892 ANAPC16Q96DE5 110 aa9.26□□□□□ -0.93
TRIM40-208ENST00000489892 TMPRSS5Q9H3S3 457 aa9.26□□□□□ -0.93
TRIM40-208ENST00000489892 THYN1Q9P016 225 aa9.26□□□□□ -0.93
TRIM40-208ENST00000489892 VPREB3Q9UKI3 123 aa9.26□□□□□ -0.93
TRIM40-208ENST00000489892 RFNGQ9Y644 331 aa9.26□□□□□ -0.93
TRIM40-208ENST00000489892 NPIPB5A8MRT5 1133 aa9.25□□□□□ -0.93
TRIM40-208ENST00000489892 PDE6DO43924 150 aa9.25□□□□□ -0.93
TRIM40-208ENST00000489892 SCGB2A1O75556 95 aa9.25□□□□□ -0.93
TRIM40-208ENST00000489892 EIF3GO75821 320 aaKnown RBP eCLIP9.25□□□□□ -0.93
TRIM40-208ENST00000489892 RNASE2P10153 161 aaKnown RBP9.25□□□□□ -0.93
TRIM40-208ENST00000489892 S100PP25815 95 aa9.25□□□□□ -0.93
TRIM40-208ENST00000489892 GPX4P36969 197 aaPredicted RBP9.25□□□□□ -0.93
TRIM40-208ENST00000489892 OPRK1P41145 380 aa9.25□□□□□ -0.93
TRIM40-208ENST00000489892 CEBPGP53567 150 aa9.25□□□□□ -0.93
TRIM40-208ENST00000489892 CD81P60033 236 aa9.25□□□□□ -0.93
TRIM40-208ENST00000489892 WT1-ASQ06250 92 aa9.25□□□□□ -0.93
TRIM40-208ENST00000489892 FABP9Q0Z7S8 132 aa9.25□□□□□ -0.93
TRIM40-208ENST00000489892 RAB31Q13636 194 aa9.25□□□□□ -0.93
TRIM40-208ENST00000489892 MRGPRG-AS1Q2M3A8 158 aa9.25□□□□□ -0.93
TRIM40-208ENST00000489892 C10orf55Q5SWW7 151 aa9.25□□□□□ -0.93
TRIM40-208ENST00000489892 Q6YL49 198 aa9.25□□□□□ -0.93
TRIM40-208ENST00000489892 PIFOQ8TCI5 191 aa9.25□□□□□ -0.93
TRIM40-208ENST00000489892 SLC35E1Q96K37 410 aa9.25□□□□□ -0.93
TRIM40-208ENST00000489892 VSIRQ9H7M9 311 aa9.25□□□□□ -0.93
TRIM40-208ENST00000489892 ZNF580Q9UK33 172 aa9.25□□□□□ -0.93
TRIM40-208ENST00000489892 CDC42EP3Q9UKI2 254 aa9.25□□□□□ -0.93
TRIM40-208ENST00000489892 F11RQ9Y624 299 aaKnown RBP9.25□□□□□ -0.93
TRIM40-208ENST00000489892 ARL2-SNX15V9GYD0 113 aa9.25□□□□□ -0.93
TRIM40-208ENST00000489892 CUBNO60494 3623 aa9.24□□□□□ -0.93
TRIM40-208ENST00000489892 TEX22C9J3V5 150 aa9.24□□□□□ -0.93
TRIM40-208ENST00000489892 FCN1O00602 326 aa9.24□□□□□ -0.93
TRIM40-208ENST00000489892 DEFA4P12838 97 aa9.24□□□□□ -0.93
TRIM40-208ENST00000489892 HIST1H1BP16401 226 aaKnown RBP9.24□□□□□ -0.93
TRIM40-208ENST00000489892 KIAA0141Q14154 515 aaPredicted RBP9.24□□□□□ -0.93
TRIM40-208ENST00000489892 TMEM241Q24JQ0 296 aa9.24□□□□□ -0.93
TRIM40-208ENST00000489892 ZNF674Q2M3X9 581 aa9.24□□□□□ -0.93
TRIM40-208ENST00000489892 DNLZQ5SXM8 178 aa9.24□□□□□ -0.93
TRIM40-208ENST00000489892 ACSM6Q6P461 480 aa9.24□□□□□ -0.93
TRIM40-208ENST00000489892 RPP25LQ8N5L8 163 aaKnown RBP9.24□□□□□ -0.93
TRIM40-208ENST00000489892 OR10W1Q8NGF6 305 aa9.24□□□□□ -0.93
TRIM40-208ENST00000489892 SGMS2Q8NHU3 365 aa9.24□□□□□ -0.93
TRIM40-208ENST00000489892 Q8WTZ3 238 aa9.24□□□□□ -0.93
TRIM40-208ENST00000489892 SMIM7Q9BQ49 75 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms