RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 SLC25A21Q9BQT8 299 aaPredicted RBP8.59□□□□□ -1.03
ACTN4-206ENST00000489451 CSTL1Q9H114 145 aa8.59□□□□□ -1.03
ACTN4-206ENST00000489451 VSIRQ9H7M9 311 aa8.59□□□□□ -1.03
ACTN4-206ENST00000489451 MRPL36Q9P0J6 103 aaKnown RBP8.59□□□□□ -1.03
ACTN4-206ENST00000489451 TMEM56-RWDD3S4R434 201 aa8.59□□□□□ -1.03
ACTN4-206ENST00000489451 DNAH2Q9P225 4427 aa8.58□□□□□ -1.04
ACTN4-206ENST00000489451 A0A1B0GU03 582 aa8.58□□□□□ -1.04
ACTN4-206ENST00000489451 GNG7O60262 68 aa8.58□□□□□ -1.04
ACTN4-206ENST00000489451 GIG44P09565 113 aaPredicted RBP8.58□□□□□ -1.04
ACTN4-206ENST00000489451 ZNF79Q15937 498 aa8.58□□□□□ -1.04
ACTN4-206ENST00000489451 TRIQKQ629K1 86 aa8.58□□□□□ -1.04
ACTN4-206ENST00000489451 LGALS9CQ6DKI2 356 aa8.58□□□□□ -1.04
ACTN4-206ENST00000489451 PVRIGQ6DKI7 326 aa8.58□□□□□ -1.04
ACTN4-206ENST00000489451 TCF24Q7RTU0 167 aa8.58□□□□□ -1.04
ACTN4-206ENST00000489451 TMED4Q7Z7H5 227 aa8.58□□□□□ -1.04
ACTN4-206ENST00000489451 LGI3Q8N145 548 aa8.58□□□□□ -1.04
ACTN4-206ENST00000489451 TRIM63Q969Q1 353 aa8.58□□□□□ -1.04
ACTN4-206ENST00000489451 C11orf68Q9H3H3 251 aaKnown RBP8.58□□□□□ -1.04
ACTN4-206ENST00000489451 HEYLQ9NQ87 328 aaPredicted RBP8.58□□□□□ -1.04
ACTN4-206ENST00000489451 CACNG5Q9UF02 275 aa8.58□□□□□ -1.04
ACTN4-206ENST00000489451 KLK5Q9Y337 293 aaPredicted RBP8.58□□□□□ -1.04
ACTN4-206ENST00000489451 DNAH17Q9UFH2 4485 aa8.58□□□□□ -1.04
ACTN4-206ENST00000489451 TRAV14DV4A0A0A6YYC5 116 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 A0A0B4J2A0 478 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 IGHV3-66A0A0C4DH42 116 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 CENPXA8MT69 81 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 CEBPZOSA8MTT3 80 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 MPTX1A8MV57 137 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 DEFB4AO15263 64 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 YIF1AO95070 293 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 SULT1A3P0DMM9 295 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 SULT1A4P0DMN0 295 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 HTR2BP41595 481 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 TMEM187Q14656 261 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 AARDQ4LEZ3 155 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 TMEM128Q5BJH2 165 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 LEMD1Q68G75 181 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 Q6ZRM9 215 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 NOXA1Q86UR1 476 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 OR11H2Q8NH07 326 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 LHFPL5Q8TAF8 219 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 GPR146Q96CH1 333 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 RARRES2Q99969 163 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 MS4A6AQ9H2W1 248 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 SHPKQ9UHJ6 478 aa8.57□□□□□ -1.04
ACTN4-206ENST00000489451 A0A0G2JRQ6 117 aa8.56□□□□□ -1.04
ACTN4-206ENST00000489451 RPS10-NUDT3A0A1W2PQS6 291 aa8.56□□□□□ -1.04
ACTN4-206ENST00000489451 NAP1L6A6NFF2 107 aa8.56□□□□□ -1.04
ACTN4-206ENST00000489451 DFFBO76075 338 aa8.56□□□□□ -1.04
ACTN4-206ENST00000489451 MED14OSP0DP75 135 aa8.56□□□□□ -1.04
ACTN4-206ENST00000489451 VAMP1P23763 118 aa8.56□□□□□ -1.04
ACTN4-206ENST00000489451 OPRK1P41145 380 aa8.56□□□□□ -1.04
ACTN4-206ENST00000489451 CCR6P51684 374 aa8.56□□□□□ -1.04
ACTN4-206ENST00000489451 TMEM217Q8N7C4 229 aa8.56□□□□□ -1.04
ACTN4-206ENST00000489451 Q8NAQ8 132 aa8.56□□□□□ -1.04
ACTN4-206ENST00000489451 TMEM230Q96A57 120 aa8.56□□□□□ -1.04
ACTN4-206ENST00000489451 SRRQ9GZT4 340 aa8.56□□□□□ -1.04
ACTN4-206ENST00000489451 FNDC4Q9H6D8 234 aaPredicted RBP8.56□□□□□ -1.04
ACTN4-206ENST00000489451 PLA2G2EQ9NZK7 142 aa8.56□□□□□ -1.04
ACTN4-206ENST00000489451 TMEM50AO95807 157 aa8.55□□□□□ -1.04
ACTN4-206ENST00000489451 CA1P00915 261 aaPredicted RBP8.55□□□□□ -1.04
ACTN4-206ENST00000489451 RNASE2P10153 161 aaKnown RBP8.55□□□□□ -1.04
ACTN4-206ENST00000489451 DEFB131AP59861 70 aa8.55□□□□□ -1.04
ACTN4-206ENST00000489451 SMCO1Q147U7 214 aa8.55□□□□□ -1.04
ACTN4-206ENST00000489451 RBMS2Q15434 407 aaKnown RBP8.55□□□□□ -1.04
ACTN4-206ENST00000489451 MLANAQ16655 118 aa8.55□□□□□ -1.04
ACTN4-206ENST00000489451 CENPSQ8N2Z9 138 aa8.55□□□□□ -1.04
ACTN4-206ENST00000489451 GINS3Q9BRX5 216 aa8.55□□□□□ -1.04
ACTN4-206ENST00000489451 FBXL17Q9UF56 701 aa8.55□□□□□ -1.04
ACTN4-206ENST00000489451 PUS1Q9Y606 427 aaKnown RBP eCLIP8.55□□□□□ -1.04
ACTN4-206ENST00000489451 DUXBA0A1W2PPF3 345 aa8.54□□□□□ -1.04
ACTN4-206ENST00000489451 RBMY1A1P0DJD3 496 aaKnown RBP8.54□□□□□ -1.04
ACTN4-206ENST00000489451 RBMY1CP0DJD4 496 aa8.54□□□□□ -1.04
ACTN4-206ENST00000489451 C4BPBP20851 252 aa8.54□□□□□ -1.04
ACTN4-206ENST00000489451 SUPT4H1P63272 117 aaKnown RBP8.54□□□□□ -1.04
ACTN4-206ENST00000489451 RBMY1FQ15415 496 aaKnown RBP8.54□□□□□ -1.04
ACTN4-206ENST00000489451 NMSQ5H8A3 153 aa8.54□□□□□ -1.04
ACTN4-206ENST00000489451 ETFRF1Q6IPR1 90 aa8.54□□□□□ -1.04
ACTN4-206ENST00000489451 ZNF600Q6ZNG1 722 aa8.54□□□□□ -1.04
ACTN4-206ENST00000489451 LYZL2Q7Z4W2 148 aa8.54□□□□□ -1.04
ACTN4-206ENST00000489451 SLC24A4Q8NFF2 622 aa8.54□□□□□ -1.04
ACTN4-206ENST00000489451 OR1S1Q8NH92 325 aa8.54□□□□□ -1.04
ACTN4-206ENST00000489451 C11orf45Q8TAV5 145 aa8.54□□□□□ -1.04
ACTN4-206ENST00000489451 RNASEH2CQ8TDP1 164 aaKnown RBP8.54□□□□□ -1.04
ACTN4-206ENST00000489451 PRR13Q9NZ81 148 aa8.54□□□□□ -1.04
ACTN4-206ENST00000489451 U3KQ87 197 aa8.54□□□□□ -1.04
ACTN4-206ENST00000489451 DYNC1H1Q14204 4646 aaKnown RBP8.54□□□□□ -1.04
ACTN4-206ENST00000489451 TRAV30A0A087WSZ9 112 aa8.53□□□□□ -1.04
ACTN4-206ENST00000489451 TRAV2A0A0B4J234 112 aa8.53□□□□□ -1.04
ACTN4-206ENST00000489451 K7EQG2 157 aa8.53□□□□□ -1.04
ACTN4-206ENST00000489451 IFNA10P01566 189 aa8.53□□□□□ -1.04
ACTN4-206ENST00000489451 CD5P06127 495 aa8.53□□□□□ -1.04
ACTN4-206ENST00000489451 SLC25A4P12235 298 aa8.53□□□□□ -1.04
ACTN4-206ENST00000489451 CMC4P56277 68 aaPredicted RBP8.53□□□□□ -1.04
ACTN4-206ENST00000489451 ATP5IP56385 69 aaPredicted RBP8.53□□□□□ -1.04
ACTN4-206ENST00000489451 UBE2MP61081 183 aaKnown RBP8.53□□□□□ -1.04
ACTN4-206ENST00000489451 BSXQ3C1V8 233 aa8.53□□□□□ -1.04
ACTN4-206ENST00000489451 C2orf83Q53S99 150 aa8.53□□□□□ -1.04
ACTN4-206ENST00000489451 TRPT1Q86TN4 253 aaKnown RBP8.53□□□□□ -1.04
ACTN4-206ENST00000489451 OR4X1Q8NH49 305 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms