RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 IGHV3OR16-13A0A075B7E8 117 aa10.04□□□□□ -0.8
CCL28-202ENST00000489442 IGHV3-74A0A0B4J1X5 117 aa10.04□□□□□ -0.8
CCL28-202ENST00000489442 OR4C46A6NHA9 309 aa10.04□□□□□ -0.8
CCL28-202ENST00000489442 CHEK1O14757 476 aa10.04□□□□□ -0.8
CCL28-202ENST00000489442 ADAP1O75689 374 aa10.04□□□□□ -0.8
CCL28-202ENST00000489442 NPPCP23582 126 aa10.04□□□□□ -0.8
CCL28-202ENST00000489442 OR10J1P30954 320 aa10.04□□□□□ -0.8
CCL28-202ENST00000489442 RAB11AP62491 216 aa10.04□□□□□ -0.8
CCL28-202ENST00000489442 MZT2BQ6NZ67 158 aa10.04□□□□□ -0.8
CCL28-202ENST00000489442 OR1S2Q8NGQ3 325 aa10.04□□□□□ -0.8
CCL28-202ENST00000489442 Q8WTZ3 238 aa10.04□□□□□ -0.8
CCL28-202ENST00000489442 TMEM170AQ8WVE7 144 aa10.04□□□□□ -0.8
CCL28-202ENST00000489442 NPIPB3Q92617 1050 aa10.04□□□□□ -0.8
CCL28-202ENST00000489442 NARS2Q96I59 477 aaKnown RBP10.04□□□□□ -0.8
CCL28-202ENST00000489442 CIB3Q96Q77 187 aaPredicted RBP10.04□□□□□ -0.8
CCL28-202ENST00000489442 RNF2Q99496 336 aa10.04□□□□□ -0.8
CCL28-202ENST00000489442 MAGT1Q9H0U3 335 aa10.04□□□□□ -0.8
CCL28-202ENST00000489442 WFDC10AQ9H1F0 79 aa10.04□□□□□ -0.8
CCL28-202ENST00000489442 C20orf85Q9H1P6 137 aa10.04□□□□□ -0.8
CCL28-202ENST00000489442 BATF3Q9NR55 127 aa10.04□□□□□ -0.8
CCL28-202ENST00000489442 PLA2G2EQ9NZK7 142 aa10.04□□□□□ -0.8
CCL28-202ENST00000489442 IGKV3-7A0A075B6H7 116 aa10.03□□□□□ -0.8
CCL28-202ENST00000489442 TRAV6A0A075B6T7 132 aa10.03□□□□□ -0.8
CCL28-202ENST00000489442 WRBO00258 174 aa10.03□□□□□ -0.8
CCL28-202ENST00000489442 SYNGR2O43760 224 aa10.03□□□□□ -0.8
CCL28-202ENST00000489442 IGKV1-17P01599 117 aa10.03□□□□□ -0.8
CCL28-202ENST00000489442 TCRBP04435 133 aa10.03□□□□□ -0.8
CCL28-202ENST00000489442 RPL11P62913 178 aaKnown RBP10.03□□□□□ -0.8
CCL28-202ENST00000489442 PAFAH1B2P68402 229 aa10.03□□□□□ -0.8
CCL28-202ENST00000489442 HAGHQ16775 308 aa10.03□□□□□ -0.8
CCL28-202ENST00000489442 ZNF414Q96IQ9 312 aa10.03□□□□□ -0.8
CCL28-202ENST00000489442 SLC35E1Q96K37 410 aa10.03□□□□□ -0.8
CCL28-202ENST00000489442 WWC2-AS2Q96NR7 200 aa10.03□□□□□ -0.8
CCL28-202ENST00000489442 RCHY1Q96PM5 261 aa10.03□□□□□ -0.8
CCL28-202ENST00000489442 METTL26Q96S19 204 aa10.03□□□□□ -0.8
CCL28-202ENST00000489442 WDR12Q9GZL7 423 aaKnown RBP10.03□□□□□ -0.8
CCL28-202ENST00000489442 TMEM231Q9H6L2 316 aa10.03□□□□□ -0.8
CCL28-202ENST00000489442 ZFAND3Q9H8U3 227 aa10.03□□□□□ -0.8
CCL28-202ENST00000489442 PTTG2Q9NZH5 202 aa10.03□□□□□ -0.8
CCL28-202ENST00000489442 FAM240BA0A1B0GVZ2 78 aa10.02□□□□□ -0.81
CCL28-202ENST00000489442 A0A1W2PS18 150 aa10.02□□□□□ -0.81
CCL28-202ENST00000489442 CD5P06127 495 aa10.02□□□□□ -0.81
CCL28-202ENST00000489442 GPX4P36969 197 aaPredicted RBP10.02□□□□□ -0.81
CCL28-202ENST00000489442 TFPI2P48307 235 aa10.02□□□□□ -0.81
CCL28-202ENST00000489442 ZNF846Q147U1 533 aa10.02□□□□□ -0.81
CCL28-202ENST00000489442 NUDT15Q9NV35 164 aa10.02□□□□□ -0.81
CCL28-202ENST00000489442 IGHV3-66A0A0C4DH42 116 aa10.01□□□□□ -0.81
CCL28-202ENST00000489442 IGLC1P0CG04 106 aa10.01□□□□□ -0.81
CCL28-202ENST00000489442 RD3LP0DJH9 198 aa10.01□□□□□ -0.81
CCL28-202ENST00000489442 NKX2-1P43699 371 aaPredicted RBP10.01□□□□□ -0.81
CCL28-202ENST00000489442 YPEL3P61236 119 aaPredicted RBP10.01□□□□□ -0.81
CCL28-202ENST00000489442 SPANXN5Q5MJ07 72 aa10.01□□□□□ -0.81
CCL28-202ENST00000489442 TCF24Q7RTU0 167 aa10.01□□□□□ -0.81
CCL28-202ENST00000489442 GBGT1Q8N5D6 347 aa10.01□□□□□ -0.81
CCL28-202ENST00000489442 ST8SIA2Q92186 375 aa10.01□□□□□ -0.81
CCL28-202ENST00000489442 SPATA25Q9BR10 227 aa10.01□□□□□ -0.81
CCL28-202ENST00000489442 TM2D3Q9BRN9 247 aa10.01□□□□□ -0.81
CCL28-202ENST00000489442 UBQLN2Q9UHD9 624 aa10.01□□□□□ -0.81
CCL28-202ENST00000489442 RBMY1BA6NDE4 496 aaKnown RBP10□□□□□ -0.81
CCL28-202ENST00000489442 RBMY1EA6NEQ0 496 aaKnown RBP10□□□□□ -0.81
CCL28-202ENST00000489442 ZFP92A6NM28 416 aa10□□□□□ -0.81
CCL28-202ENST00000489442 MPTX1A8MV57 137 aa10□□□□□ -0.81
CCL28-202ENST00000489442 DNASE2O00115 360 aaPredicted RBP10□□□□□ -0.81
CCL28-202ENST00000489442 SCGB1D2O95969 90 aa10□□□□□ -0.81
CCL28-202ENST00000489442 APOHP02749 345 aaPredicted RBP10□□□□□ -0.81
CCL28-202ENST00000489442 H2AFB2P0C5Z0 115 aa10□□□□□ -0.81
CCL28-202ENST00000489442 RBMY1DP0C7P1 496 aaKnown RBP10□□□□□ -0.81
CCL28-202ENST00000489442 IAH1Q2TAA2 248 aaPredicted RBP10□□□□□ -0.81
CCL28-202ENST00000489442 MITD1Q8WV92 249 aa10□□□□□ -0.81
CCL28-202ENST00000489442 GRAMD2BQ96HH9 432 aa10□□□□□ -0.81
CCL28-202ENST00000489442 VSIRQ9H7M9 311 aa10□□□□□ -0.81
CCL28-202ENST00000489442 GSKIPQ9P0R6 139 aa10□□□□□ -0.81
CCL28-202ENST00000489442 STRAPQ9Y3F4 350 aaKnown RBP10□□□□□ -0.81
CCL28-202ENST00000489442 DFFBO76075 338 aa9.99□□□□□ -0.81
CCL28-202ENST00000489442 IL4P05112 153 aa9.99□□□□□ -0.81
CCL28-202ENST00000489442 FABP1P07148 127 aa9.99□□□□□ -0.81
CCL28-202ENST00000489442 CRYBB3P26998 211 aa9.99□□□□□ -0.81
CCL28-202ENST00000489442 CMC4P56277 68 aaPredicted RBP9.99□□□□□ -0.81
CCL28-202ENST00000489442 POLR2GP62487 172 aaKnown RBP eCLIP9.99□□□□□ -0.81
CCL28-202ENST00000489442 ID3Q02535 119 aa9.99□□□□□ -0.81
CCL28-202ENST00000489442 GAMTQ14353 236 aa9.99□□□□□ -0.81
CCL28-202ENST00000489442 WFDC3Q8IUB2 231 aa9.99□□□□□ -0.81
CCL28-202ENST00000489442 HUWE1Q7Z6Z7 4374 aaKnown RBP9.98□□□□□ -0.81
CCL28-202ENST00000489442 LOC102724200A0A096LPH7 203 aaPredicted RBP9.98□□□□□ -0.81
CCL28-202ENST00000489442 FAM25EA8MYX2 175 aa9.98□□□□□ -0.81
CCL28-202ENST00000489442 H3BP45 60 aa9.98□□□□□ -0.81
CCL28-202ENST00000489442 SSSCA1O60232 199 aa9.98□□□□□ -0.81
CCL28-202ENST00000489442 UPK1BO75841 260 aa9.98□□□□□ -0.81
CCL28-202ENST00000489442 TOMM40O96008 361 aa9.98□□□□□ -0.81
CCL28-202ENST00000489442 HNRNPCP07910 306 aaKnown RBP eCLIP9.98□□□□□ -0.81
CCL28-202ENST00000489442 EIF2B2P49770 351 aaKnown RBP9.98□□□□□ -0.81
CCL28-202ENST00000489442 ASAH1Q13510 395 aa9.98□□□□□ -0.81
CCL28-202ENST00000489442 FAM90A2PQ658T7 463 aa9.98□□□□□ -0.81
CCL28-202ENST00000489442 LINC00322Q6ZN03 302 aaPredicted RBP9.98□□□□□ -0.81
CCL28-202ENST00000489442 LILRB2Q8N423 598 aa9.98□□□□□ -0.81
CCL28-202ENST00000489442 OR4D5Q8NGN0 318 aa9.98□□□□□ -0.81
CCL28-202ENST00000489442 ENKURQ8TC29 256 aa9.98□□□□□ -0.81
CCL28-202ENST00000489442 ZNF431Q8TF32 576 aaPredicted RBP9.98□□□□□ -0.81
CCL28-202ENST00000489442 SEC22CQ9BRL7 303 aa9.98□□□□□ -0.81
CCL28-202ENST00000489442 GGTLC1Q9BX51 225 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms