RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 C6orf62Q9GZU0 229 aaPredicted RBP4.38□□□□□ -1.71
CDHR3-213ENST00000488386 TECRQ9NZ01 308 aaKnown RBP4.38□□□□□ -1.71
CDHR3-213ENST00000488386 THYN1Q9P016 225 aa4.38□□□□□ -1.71
CDHR3-213ENST00000488386 COPZ2Q9P299 210 aa4.38□□□□□ -1.71
CDHR3-213ENST00000488386 UFC1Q9Y3C8 167 aa4.38□□□□□ -1.71
CDHR3-213ENST00000488386 CSMD3Q7Z407 3707 aa4.38□□□□□ -1.71
CDHR3-213ENST00000488386 NDUFA4O00483 81 aa4.37□□□□□ -1.71
CDHR3-213ENST00000488386 NUPL2O15504 423 aaKnown RBP4.37□□□□□ -1.71
CDHR3-213ENST00000488386 TOMM40O96008 361 aa4.37□□□□□ -1.71
CDHR3-213ENST00000488386 IFNA17P01571 189 aa4.37□□□□□ -1.71
CDHR3-213ENST00000488386 CD74P04233 296 aa4.37□□□□□ -1.71
CDHR3-213ENST00000488386 P0C879 139 aa4.37□□□□□ -1.71
CDHR3-213ENST00000488386 S100GP29377 79 aa4.37□□□□□ -1.71
CDHR3-213ENST00000488386 HOXA1P49639 335 aaPredicted RBP4.37□□□□□ -1.71
CDHR3-213ENST00000488386 TAS2R19P59542 299 aa4.37□□□□□ -1.71
CDHR3-213ENST00000488386 RND3P61587 244 aa4.37□□□□□ -1.71
CDHR3-213ENST00000488386 HSPE1P61604 102 aaKnown RBP4.37□□□□□ -1.71
CDHR3-213ENST00000488386 EWSR1Q01844 656 aaKnown RBP eCLIP4.37□□□□□ -1.71
CDHR3-213ENST00000488386 THOC7Q6I9Y2 204 aaKnown RBP4.37□□□□□ -1.71
CDHR3-213ENST00000488386 GSG1LQ6UXU4 331 aa4.37□□□□□ -1.71
CDHR3-213ENST00000488386 SLC16A13Q7RTY0 426 aa4.37□□□□□ -1.71
CDHR3-213ENST00000488386 SLC35G3Q8N808 338 aa4.37□□□□□ -1.71
CDHR3-213ENST00000488386 Q8N9P0 234 aaPredicted RBP4.37□□□□□ -1.71
CDHR3-213ENST00000488386 OR4C16Q8NGL9 310 aa4.37□□□□□ -1.71
CDHR3-213ENST00000488386 OR1P1Q8NH06 330 aa4.37□□□□□ -1.71
CDHR3-213ENST00000488386 RNASE11Q8TAA1 199 aaKnown RBP4.37□□□□□ -1.71
CDHR3-213ENST00000488386 DYNC2LI1Q8TCX1 351 aa4.37□□□□□ -1.71
CDHR3-213ENST00000488386 TSC22D3Q99576 134 aa4.37□□□□□ -1.71
CDHR3-213ENST00000488386 SRSF8Q9BRL6 282 aaKnown RBP4.37□□□□□ -1.71
CDHR3-213ENST00000488386 C5orf66Q9H5L9 145 aa4.37□□□□□ -1.71
CDHR3-213ENST00000488386 MAP6D1Q9H9H5 199 aa4.37□□□□□ -1.71
CDHR3-213ENST00000488386 MRPL27Q9P0M9 148 aaKnown RBP4.37□□□□□ -1.71
CDHR3-213ENST00000488386 TENM2Q9NT68 2774 aa4.37□□□□□ -1.71
CDHR3-213ENST00000488386 LYSTQ99698 3801 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 STAB2Q8WWQ8 2551 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 LOC102724200A0A096LPH7 203 aaPredicted RBP4.36□□□□□ -1.71
CDHR3-213ENST00000488386 A0A0A0MQY5 61 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 IGHV7-4-1A0A0J9YVY3 117 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 TEX13DA0A0J9YY54 714 aaPredicted RBP4.36□□□□□ -1.71
CDHR3-213ENST00000488386 A0A1B0GU03 582 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 H3BMQ9 156 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 GABARAPH6UMI1 98 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 CHEK1O14757 476 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 GNG7O60262 68 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 RNASE2P10153 161 aaKnown RBP4.36□□□□□ -1.71
CDHR3-213ENST00000488386 FCGR2BP31994 310 aaPredicted RBP4.36□□□□□ -1.71
CDHR3-213ENST00000488386 MFAP4P55083 255 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 ERHP84090 104 aaKnown RBP4.36□□□□□ -1.71
CDHR3-213ENST00000488386 DEFB135Q30KP9 77 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 TMEM268Q5VZI3 342 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 TOMM20LQ6UXN7 152 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 HSD17B13Q7Z5P4 300 aaPredicted RBP4.36□□□□□ -1.71
CDHR3-213ENST00000488386 SELENOHQ8IZQ5 122 aaKnown RBP4.36□□□□□ -1.71
CDHR3-213ENST00000488386 ARRDC1Q8N5I2 433 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 FAM24BQ8N5W8 94 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 OR51S1Q8NGJ8 323 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 TERB2Q8NHR7 220 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 MPLKIPQ8TAP9 179 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 SMIM4Q8WVI0 70 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 TMEM230Q96A57 120 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 GPR146Q96CH1 333 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 OVOL2Q9BRP0 275 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 RHPN1-AS1Q9BWJ2 59 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 GGTLC1Q9BX51 225 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 FNDC4Q9H6D8 234 aaPredicted RBP4.36□□□□□ -1.71
CDHR3-213ENST00000488386 NAA60Q9H7X0 242 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 DAZ1Q9NQZ3 744 aaKnown RBP4.36□□□□□ -1.71
CDHR3-213ENST00000488386 FKBP11Q9NYL4 201 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 SMPXQ9UHP9 88 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 DNAH1Q9P2D7 4330 aa4.36□□□□□ -1.71
CDHR3-213ENST00000488386 IGLV5-39A0A0G2JS06 123 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 A0A0J9YWU9 116 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 LCE6AA0A183 80 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 CCDC160A6NGH7 325 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 DISC1C4P0D8 188 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 TSPAN4O14817 238 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 CYB5BO43169 146 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 DFFBO76075 338 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 AKAIN1P0CW23 69 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 UCP1P25874 307 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 TNFSF8P32971 234 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 OPRK1P41145 380 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 TNFRSF9Q07011 255 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 TIGITQ495A1 244 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 LEMD1Q68G75 181 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 SPSB3Q6PJ21 355 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 TCF24Q7RTU0 167 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 CCDC71LQ8N9Z2 235 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 ZNF114Q8NC26 417 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 TMEM116Q8NCL8 245 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 ZFAND1Q8TCF1 268 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 GLYATL2Q8WU03 294 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 RAB2BQ8WUD1 216 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 TMEM170AQ8WVE7 144 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 MARC2Q969Z3 335 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 ZNF486Q96H40 463 aaPredicted RBP4.35□□□□□ -1.71
CDHR3-213ENST00000488386 SPAG8Q99932 426 aaPredicted RBP4.35□□□□□ -1.71
CDHR3-213ENST00000488386 BCL7BQ9BQE9 202 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 PDCD10Q9BUL8 212 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 SLIRPQ9GZT3 109 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms