RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 SLC24A4Q8NFF2 622 aa16.57■□□□□ 0.24
PTPN4-211ENST00000488279 GRAMD2BQ96HH9 432 aa16.57■□□□□ 0.24
PTPN4-211ENST00000488279 SCGB3A2Q96PL1 93 aa16.57■□□□□ 0.24
PTPN4-211ENST00000488279 RSL24D1Q9UHA3 163 aaKnown RBP16.57■□□□□ 0.24
PTPN4-211ENST00000488279 SCP2D1Q9UJQ7 156 aa16.57■□□□□ 0.24
PTPN4-211ENST00000488279 BIRC6Q9NR09 4857 aa16.56■□□□□ 0.24
PTPN4-211ENST00000488279 ANKRD20A5PA0PJZ0 165 aa16.56■□□□□ 0.24
PTPN4-211ENST00000488279 GSTZ1O43708 216 aaPredicted RBP16.56■□□□□ 0.24
PTPN4-211ENST00000488279 PRSS54Q6PEW0 395 aa16.56■□□□□ 0.24
PTPN4-211ENST00000488279 STHQ8IWL8 128 aa16.56■□□□□ 0.24
PTPN4-211ENST00000488279 STXBP6Q8NFX7 210 aa16.56■□□□□ 0.24
PTPN4-211ENST00000488279 OR1S2Q8NGQ3 325 aa16.56■□□□□ 0.24
PTPN4-211ENST00000488279 Q8WTZ3 238 aa16.56■□□□□ 0.24
PTPN4-211ENST00000488279 PHLDA1Q8WV24 401 aaPredicted RBP16.56■□□□□ 0.24
PTPN4-211ENST00000488279 IL22RA2Q969J5 263 aa16.56■□□□□ 0.24
PTPN4-211ENST00000488279 RND2P52198 227 aa16.55■□□□□ 0.24
PTPN4-211ENST00000488279 TMEM187Q14656 261 aa16.55■□□□□ 0.24
PTPN4-211ENST00000488279 ETFRF1Q6IPR1 90 aa16.55■□□□□ 0.24
PTPN4-211ENST00000488279 NOXA1Q86UR1 476 aa16.55■□□□□ 0.24
PTPN4-211ENST00000488279 K7EQG2 157 aa16.54■□□□□ 0.24
PTPN4-211ENST00000488279 IGLC1P0CG04 106 aa16.54■□□□□ 0.24
PTPN4-211ENST00000488279 SULT1A3P0DMM9 295 aa16.54■□□□□ 0.24
PTPN4-211ENST00000488279 SULT1A4P0DMN0 295 aa16.54■□□□□ 0.24
PTPN4-211ENST00000488279 OR10J1P30954 320 aa16.54■□□□□ 0.24
PTPN4-211ENST00000488279 EIF2B2P49770 351 aaKnown RBP16.54■□□□□ 0.24
PTPN4-211ENST00000488279 YPEL3P61236 119 aaPredicted RBP16.54■□□□□ 0.24
PTPN4-211ENST00000488279 RBMS2Q15434 407 aaKnown RBP16.54■□□□□ 0.24
PTPN4-211ENST00000488279 MCUBQ9NWR8 336 aa16.54■□□□□ 0.24
PTPN4-211ENST00000488279 FABP12A6NFH5 140 aa16.53■□□□□ 0.24
PTPN4-211ENST00000488279 NOL3O60936 208 aaKnown RBP16.53■□□□□ 0.24
PTPN4-211ENST00000488279 NXPH3O95157 252 aa16.53■□□□□ 0.24
PTPN4-211ENST00000488279 NMSQ5H8A3 153 aa16.53■□□□□ 0.24
PTPN4-211ENST00000488279 C11orf45Q8TAV5 145 aa16.53■□□□□ 0.24
PTPN4-211ENST00000488279 MFFQ9GZY8 342 aa16.53■□□□□ 0.24
PTPN4-211ENST00000488279 C11orf68Q9H3H3 251 aaKnown RBP16.53■□□□□ 0.24
PTPN4-211ENST00000488279 U3KQE9 123 aa16.53■□□□□ 0.24
PTPN4-211ENST00000488279 HELTA6NFD8 242 aa16.52■□□□□ 0.24
PTPN4-211ENST00000488279 NPY1RP25929 384 aa16.52■□□□□ 0.24
PTPN4-211ENST00000488279 AP2S1P53680 142 aaPredicted RBP16.52■□□□□ 0.24
PTPN4-211ENST00000488279 DCANP1Q8TF63 244 aa16.52■□□□□ 0.24
PTPN4-211ENST00000488279 TMEM170AQ8WVE7 144 aa16.52■□□□□ 0.24
PTPN4-211ENST00000488279 SLIRPQ9GZT3 109 aaKnown RBP16.52■□□□□ 0.24
PTPN4-211ENST00000488279 IFNA10P01566 189 aa16.51■□□□□ 0.23
PTPN4-211ENST00000488279 HNRNPCP07910 306 aaKnown RBP eCLIP16.51■□□□□ 0.23
PTPN4-211ENST00000488279 ZNF688P0C7X2 276 aa16.51■□□□□ 0.23
PTPN4-211ENST00000488279 AKR1C4P17516 323 aa16.51■□□□□ 0.23
PTPN4-211ENST00000488279 TNFSF8P32971 234 aa16.51■□□□□ 0.23
PTPN4-211ENST00000488279 CCR6P51684 374 aa16.51■□□□□ 0.23
PTPN4-211ENST00000488279 NPIPB3Q92617 1050 aa16.51■□□□□ 0.23
PTPN4-211ENST00000488279 SOSTQ9BQB4 213 aa16.51■□□□□ 0.23
PTPN4-211ENST00000488279 PRR13Q9NZ81 148 aa16.51■□□□□ 0.23
PTPN4-211ENST00000488279 U3KQ87 197 aa16.51■□□□□ 0.23
PTPN4-211ENST00000488279 A0A0B4J2A0 478 aa16.5■□□□□ 0.23
PTPN4-211ENST00000488279 IFNA4P05014 189 aa16.5■□□□□ 0.23
PTPN4-211ENST00000488279 NANOS2P60321 138 aaKnown RBP16.5■□□□□ 0.23
PTPN4-211ENST00000488279 TMEM41BQ5BJD5 291 aa16.5■□□□□ 0.23
PTPN4-211ENST00000488279 C16orf54Q6UWD8 224 aa16.5■□□□□ 0.23
PTPN4-211ENST00000488279 ACY3Q96HD9 319 aa16.5■□□□□ 0.23
PTPN4-211ENST00000488279 SHPKQ9UHJ6 478 aa16.5■□□□□ 0.23
PTPN4-211ENST00000488279 IL4P05112 153 aa16.49■□□□□ 0.23
PTPN4-211ENST00000488279 RD3LP0DJH9 198 aa16.49■□□□□ 0.23
PTPN4-211ENST00000488279 ANXA3P12429 323 aa16.49■□□□□ 0.23
PTPN4-211ENST00000488279 DHRS2Q13268 280 aa16.49■□□□□ 0.23
PTPN4-211ENST00000488279 SMCO1Q147U7 214 aa16.49■□□□□ 0.23
PTPN4-211ENST00000488279 MORN3Q6PF18 240 aaPredicted RBP16.49■□□□□ 0.23
PTPN4-211ENST00000488279 LYZL2Q7Z4W2 148 aa16.49■□□□□ 0.23
PTPN4-211ENST00000488279 TRPT1Q86TN4 253 aaKnown RBP16.49■□□□□ 0.23
PTPN4-211ENST00000488279 HSPB7Q9UBY9 170 aa16.49■□□□□ 0.23
PTPN4-211ENST00000488279 FBXL17Q9UF56 701 aa16.49■□□□□ 0.23
PTPN4-211ENST00000488279 KNCNA6PVL3 124 aa16.48■□□□□ 0.23
PTPN4-211ENST00000488279 H3BMQ9 156 aa16.48■□□□□ 0.23
PTPN4-211ENST00000488279 DEFB4AO15263 64 aa16.48■□□□□ 0.23
PTPN4-211ENST00000488279 SPP1P10451 314 aa16.48■□□□□ 0.23
PTPN4-211ENST00000488279 SUPT4H1P63272 117 aaKnown RBP16.48■□□□□ 0.23
PTPN4-211ENST00000488279 SRPXP78539 464 aa16.48■□□□□ 0.23
PTPN4-211ENST00000488279 LGI3Q8N145 548 aa16.48■□□□□ 0.23
PTPN4-211ENST00000488279 MCFD2Q8NI22 146 aa16.48■□□□□ 0.23
PTPN4-211ENST00000488279 DTD1Q8TEA8 209 aa16.48■□□□□ 0.23
PTPN4-211ENST00000488279 GLMPQ8WWB7 406 aa16.48■□□□□ 0.23
PTPN4-211ENST00000488279 PIGBOS1A0A0B4J2F0 54 aa16.47■□□□□ 0.23
PTPN4-211ENST00000488279 TOMM40O96008 361 aa16.47■□□□□ 0.23
PTPN4-211ENST00000488279 GIG44P09565 113 aaPredicted RBP16.47■□□□□ 0.23
PTPN4-211ENST00000488279 USF2Q15853 346 aaPredicted RBP16.47■□□□□ 0.23
PTPN4-211ENST00000488279 ACTL10Q5JWF8 245 aa16.47■□□□□ 0.23
PTPN4-211ENST00000488279 RBKSQ9H477 322 aa16.47■□□□□ 0.23
PTPN4-211ENST00000488279 FAUP35544 74 aaKnown RBP16.46■□□□□ 0.23
PTPN4-211ENST00000488279 ATP5IP56385 69 aaPredicted RBP16.46■□□□□ 0.23
PTPN4-211ENST00000488279 KLF9Q13886 244 aaPredicted RBP16.46■□□□□ 0.23
PTPN4-211ENST00000488279 BUB3O43684 328 aa16.45■□□□□ 0.22
PTPN4-211ENST00000488279 PSG1P11464 419 aa16.45■□□□□ 0.22
PTPN4-211ENST00000488279 PSMG4Q5JS54 123 aa16.45■□□□□ 0.22
PTPN4-211ENST00000488279 RAB40CQ96S21 281 aa16.45■□□□□ 0.22
PTPN4-211ENST00000488279 KMT2AQ03164 3969 aa16.45■□□□□ 0.22
PTPN4-211ENST00000488279 AP3S2P59780 193 aa16.44■□□□□ 0.22
PTPN4-211ENST00000488279 SNRPD3P62318 126 aaKnown RBP16.44■□□□□ 0.22
PTPN4-211ENST00000488279 LGALS9CQ6DKI2 356 aa16.44■□□□□ 0.22
PTPN4-211ENST00000488279 Q8NAQ8 132 aa16.44■□□□□ 0.22
PTPN4-211ENST00000488279 OR1S1Q8NH92 325 aa16.44■□□□□ 0.22
PTPN4-211ENST00000488279 GPX4P36969 197 aaPredicted RBP16.43■□□□□ 0.22
PTPN4-211ENST00000488279 PYDC2Q56P42 97 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms