RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 LEMD1Q68G75 181 aa14.17□□□□□ -0.14
CD55-209ENST00000488171 CEMP1Q6PRD7 247 aaPredicted RBP14.17□□□□□ -0.14
CD55-209ENST00000488171 RNASEH2CQ8TDP1 164 aaKnown RBP14.17□□□□□ -0.14
CD55-209ENST00000488171 LINC00476Q8WZB0 136 aa14.17□□□□□ -0.14
CD55-209ENST00000488171 IL22RA2Q969J5 263 aa14.17□□□□□ -0.14
CD55-209ENST00000488171 SCP2D1Q9UJQ7 156 aa14.17□□□□□ -0.14
CD55-209ENST00000488171 SCGB2A1O75556 95 aa14.16□□□□□ -0.14
CD55-209ENST00000488171 P2RY1P47900 373 aa14.16□□□□□ -0.14
CD55-209ENST00000488171 RND2P52198 227 aa14.16□□□□□ -0.14
CD55-209ENST00000488171 TMEM217Q8N7C4 229 aa14.16□□□□□ -0.14
CD55-209ENST00000488171 KRTAP3-3Q9BYR6 98 aa14.16□□□□□ -0.14
CD55-209ENST00000488171 KRTAP3-2Q9BYR7 98 aa14.16□□□□□ -0.14
CD55-209ENST00000488171 RABAC1Q9UI14 185 aa14.16□□□□□ -0.14
CD55-209ENST00000488171 KCNIP3Q9Y2W7 256 aa14.16□□□□□ -0.14
CD55-209ENST00000488171 FABP12A6NFH5 140 aa14.15□□□□□ -0.14
CD55-209ENST00000488171 K7EQG2 157 aa14.15□□□□□ -0.14
CD55-209ENST00000488171 SULT1A3P0DMM9 295 aa14.15□□□□□ -0.14
CD55-209ENST00000488171 SULT1A4P0DMN0 295 aa14.15□□□□□ -0.14
CD55-209ENST00000488171 SLC25A4P12235 298 aa14.15□□□□□ -0.14
CD55-209ENST00000488171 SUPT4H1P63272 117 aaKnown RBP14.15□□□□□ -0.14
CD55-209ENST00000488171 RBMS2Q15434 407 aaKnown RBP14.15□□□□□ -0.14
CD55-209ENST00000488171 OR1S2Q8NGQ3 325 aa14.15□□□□□ -0.14
CD55-209ENST00000488171 RARRES2Q99969 163 aa14.15□□□□□ -0.14
CD55-209ENST00000488171 MCUBQ9NWR8 336 aa14.15□□□□□ -0.14
CD55-209ENST00000488171 U3KQE9 123 aa14.15□□□□□ -0.14
CD55-209ENST00000488171 OR10J1P30954 320 aa14.14□□□□□ -0.15
CD55-209ENST00000488171 STXBP6Q8NFX7 210 aa14.14□□□□□ -0.15
CD55-209ENST00000488171 SCGB3A2Q96PL1 93 aa14.14□□□□□ -0.15
CD55-209ENST00000488171 BIRC6Q9NR09 4857 aa14.13□□□□□ -0.15
CD55-209ENST00000488171 NOL3O60936 208 aaKnown RBP14.13□□□□□ -0.15
CD55-209ENST00000488171 CA1P00915 261 aaPredicted RBP14.13□□□□□ -0.15
CD55-209ENST00000488171 AKR1C4P17516 323 aa14.13□□□□□ -0.15
CD55-209ENST00000488171 NPY1RP25929 384 aa14.13□□□□□ -0.15
CD55-209ENST00000488171 YPEL3P61236 119 aaPredicted RBP14.13□□□□□ -0.15
CD55-209ENST00000488171 LYZL2Q7Z4W2 148 aa14.13□□□□□ -0.15
CD55-209ENST00000488171 OR11H2Q8NH07 326 aa14.13□□□□□ -0.15
CD55-209ENST00000488171 MCFD2Q8NI22 146 aa14.13□□□□□ -0.15
CD55-209ENST00000488171 DCANP1Q8TF63 244 aa14.13□□□□□ -0.15
CD55-209ENST00000488171 GRAMD2BQ96HH9 432 aa14.13□□□□□ -0.15
CD55-209ENST00000488171 CACFD1Q9UGQ2 172 aa14.13□□□□□ -0.15
CD55-209ENST00000488171 A0A0B4J2A0 478 aa14.12□□□□□ -0.15
CD55-209ENST00000488171 CCR6P51684 374 aa14.12□□□□□ -0.15
CD55-209ENST00000488171 Q8WTZ3 238 aa14.12□□□□□ -0.15
CD55-209ENST00000488171 NARS2Q96I59 477 aaKnown RBP14.12□□□□□ -0.15
CD55-209ENST00000488171 C11orf68Q9H3H3 251 aaKnown RBP14.12□□□□□ -0.15
CD55-209ENST00000488171 HSPB7Q9UBY9 170 aa14.12□□□□□ -0.15
CD55-209ENST00000488171 SHPKQ9UHJ6 478 aa14.12□□□□□ -0.15
CD55-209ENST00000488171 LY6G6CO95867 125 aa14.11□□□□□ -0.15
CD55-209ENST00000488171 KLF9Q13886 244 aaPredicted RBP14.11□□□□□ -0.15
CD55-209ENST00000488171 SMCO1Q147U7 214 aa14.11□□□□□ -0.15
CD55-209ENST00000488171 USF2Q15853 346 aaPredicted RBP14.11□□□□□ -0.15
CD55-209ENST00000488171 ETFRF1Q6IPR1 90 aa14.11□□□□□ -0.15
CD55-209ENST00000488171 C16orf54Q6UWD8 224 aa14.11□□□□□ -0.15
CD55-209ENST00000488171 TRPT1Q86TN4 253 aaKnown RBP14.11□□□□□ -0.15
CD55-209ENST00000488171 STHQ8IWL8 128 aa14.11□□□□□ -0.15
CD55-209ENST00000488171 GLMPQ8WWB7 406 aa14.11□□□□□ -0.15
CD55-209ENST00000488171 NPIPB3Q92617 1050 aa14.11□□□□□ -0.15
CD55-209ENST00000488171 TRIM63Q969Q1 353 aa14.11□□□□□ -0.15
CD55-209ENST00000488171 HNRNPCP07910 306 aaKnown RBP eCLIP14.1□□□□□ -0.15
CD55-209ENST00000488171 GIG44P09565 113 aaPredicted RBP14.1□□□□□ -0.15
CD55-209ENST00000488171 ZNF688P0C7X2 276 aa14.1□□□□□ -0.15
CD55-209ENST00000488171 NOXA1Q86UR1 476 aa14.1□□□□□ -0.15
CD55-209ENST00000488171 DTD1Q8TEA8 209 aa14.1□□□□□ -0.15
CD55-209ENST00000488171 PHLDA1Q8WV24 401 aaPredicted RBP14.1□□□□□ -0.15
CD55-209ENST00000488171 ACY3Q96HD9 319 aa14.1□□□□□ -0.15
CD55-209ENST00000488171 RBKSQ9H477 322 aa14.1□□□□□ -0.15
CD55-209ENST00000488171 KLK5Q9Y337 293 aaPredicted RBP14.1□□□□□ -0.15
CD55-209ENST00000488171 IFNA10P01566 189 aa14.09□□□□□ -0.15
CD55-209ENST00000488171 IL4P05112 153 aa14.09□□□□□ -0.15
CD55-209ENST00000488171 LGI3Q8N145 548 aa14.09□□□□□ -0.15
CD55-209ENST00000488171 U3KQ87 197 aa14.09□□□□□ -0.15
CD55-209ENST00000488171 V9GYH0 126 aa14.09□□□□□ -0.15
CD55-209ENST00000488171 KNCNA6PVL3 124 aa14.09□□□□□ -0.15
CD55-209ENST00000488171 TOMM40O96008 361 aa14.09□□□□□ -0.15
CD55-209ENST00000488171 ANXA3P12429 323 aa14.09□□□□□ -0.15
CD55-209ENST00000488171 NANOS2P60321 138 aaKnown RBP14.09□□□□□ -0.15
CD55-209ENST00000488171 SRPXP78539 464 aa14.09□□□□□ -0.15
CD55-209ENST00000488171 HELTA6NFD8 242 aa14.08□□□□□ -0.16
CD55-209ENST00000488171 DEFB4AO15263 64 aa14.08□□□□□ -0.16
CD55-209ENST00000488171 RD3LP0DJH9 198 aa14.08□□□□□ -0.16
CD55-209ENST00000488171 FAUP35544 74 aaKnown RBP14.08□□□□□ -0.16
CD55-209ENST00000488171 EIF2B2P49770 351 aaKnown RBP14.08□□□□□ -0.16
CD55-209ENST00000488171 DHRS2Q13268 280 aa14.08□□□□□ -0.16
CD55-209ENST00000488171 C11orf45Q8TAV5 145 aa14.08□□□□□ -0.16
CD55-209ENST00000488171 AGRNO00468 2067 aa14.07□□□□□ -0.16
CD55-209ENST00000488171 PSG1P11464 419 aa14.07□□□□□ -0.16
CD55-209ENST00000488171 C4BPBP20851 252 aa14.07□□□□□ -0.16
CD55-209ENST00000488171 ZNF79Q15937 498 aa14.07□□□□□ -0.16
CD55-209ENST00000488171 PYDC2Q56P42 97 aa14.07□□□□□ -0.16
CD55-209ENST00000488171 BUB3O43684 328 aa14.06□□□□□ -0.16
CD55-209ENST00000488171 PITX3O75364 302 aa14.06□□□□□ -0.16
CD55-209ENST00000488171 SPP1P10451 314 aa14.06□□□□□ -0.16
CD55-209ENST00000488171 AP2S1P53680 142 aaPredicted RBP14.06□□□□□ -0.16
CD55-209ENST00000488171 TMEM128Q5BJH2 165 aa14.06□□□□□ -0.16
CD55-209ENST00000488171 ACTL10Q5JWF8 245 aa14.06□□□□□ -0.16
CD55-209ENST00000488171 MORN3Q6PF18 240 aaPredicted RBP14.06□□□□□ -0.16
CD55-209ENST00000488171 TMED4Q7Z7H5 227 aa14.06□□□□□ -0.16
CD55-209ENST00000488171 TOMM5Q8N4H5 51 aa14.06□□□□□ -0.16
CD55-209ENST00000488171 Q8NAQ8 132 aa14.06□□□□□ -0.16
CD55-209ENST00000488171 OR1S1Q8NH92 325 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms