RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 GPR146Q96CH1 333 aa8.88□□□□□ -0.99
VPS16-208ENST00000487461 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.88□□□□□ -0.99
VPS16-208ENST00000487461 U3KQE9 123 aa8.88□□□□□ -0.99
VPS16-208ENST00000487461 FRAS1Q86XX4 4008 aa8.88□□□□□ -0.99
VPS16-208ENST00000487461 TRAV30A0A087WSZ9 112 aa8.87□□□□□ -0.99
VPS16-208ENST00000487461 RBMY1A1P0DJD3 496 aaKnown RBP8.87□□□□□ -0.99
VPS16-208ENST00000487461 RBMY1CP0DJD4 496 aa8.87□□□□□ -0.99
VPS16-208ENST00000487461 HTR2BP41595 481 aa8.87□□□□□ -0.99
VPS16-208ENST00000487461 RBMY1FQ15415 496 aaKnown RBP8.87□□□□□ -0.99
VPS16-208ENST00000487461 RGS21Q2M5E4 152 aa8.87□□□□□ -0.99
VPS16-208ENST00000487461 PRSS54Q6PEW0 395 aa8.87□□□□□ -0.99
VPS16-208ENST00000487461 TRPT1Q86TN4 253 aaKnown RBP8.87□□□□□ -0.99
VPS16-208ENST00000487461 FAM219AQ8IW50 185 aa8.87□□□□□ -0.99
VPS16-208ENST00000487461 Q8NAQ8 132 aa8.87□□□□□ -0.99
VPS16-208ENST00000487461 C2CD4CQ8TF44 421 aa8.87□□□□□ -0.99
VPS16-208ENST00000487461 DCANP1Q8TF63 244 aa8.87□□□□□ -0.99
VPS16-208ENST00000487461 GRAMD2BQ96HH9 432 aa8.87□□□□□ -0.99
VPS16-208ENST00000487461 NAA60Q9H7X0 242 aa8.87□□□□□ -0.99
VPS16-208ENST00000487461 CACNG5Q9UF02 275 aa8.87□□□□□ -0.99
VPS16-208ENST00000487461 RPS10-NUDT3A0A1W2PQS6 291 aa8.86□□□□□ -0.99
VPS16-208ENST00000487461 ZNF688P0C7X2 276 aa8.86□□□□□ -0.99
VPS16-208ENST00000487461 IGLC1P0CG04 106 aa8.86□□□□□ -0.99
VPS16-208ENST00000487461 PRR20EP86478 221 aa8.86□□□□□ -0.99
VPS16-208ENST00000487461 PRR20CP86479 221 aa8.86□□□□□ -0.99
VPS16-208ENST00000487461 PRR20DP86480 221 aa8.86□□□□□ -0.99
VPS16-208ENST00000487461 PRR20BP86481 221 aa8.86□□□□□ -0.99
VPS16-208ENST00000487461 PRR20AP86496 221 aa8.86□□□□□ -0.99
VPS16-208ENST00000487461 DHODHQ02127 395 aa8.86□□□□□ -0.99
VPS16-208ENST00000487461 SSBP1Q04837 148 aaKnown RBP8.86□□□□□ -0.99
VPS16-208ENST00000487461 MEF2DQ14814 521 aa8.86□□□□□ -0.99
VPS16-208ENST00000487461 OXA1LQ15070 435 aa8.86□□□□□ -0.99
VPS16-208ENST00000487461 C2orf83Q53S99 150 aa8.86□□□□□ -0.99
VPS16-208ENST00000487461 CENPSQ8N2Z9 138 aa8.86□□□□□ -0.99
VPS16-208ENST00000487461 OR1S2Q8NGQ3 325 aa8.86□□□□□ -0.99
VPS16-208ENST00000487461 TMEM170AQ8WVE7 144 aa8.86□□□□□ -0.99
VPS16-208ENST00000487461 RBPMSQ93062 196 aaKnown RBP8.86□□□□□ -0.99
VPS16-208ENST00000487461 SLIRPQ9GZT3 109 aaKnown RBP8.86□□□□□ -0.99
VPS16-208ENST00000487461 HEYLQ9NQ87 328 aaPredicted RBP8.86□□□□□ -0.99
VPS16-208ENST00000487461 CCDC59Q9P031 241 aaKnown RBP8.86□□□□□ -0.99
VPS16-208ENST00000487461 GPR132Q9UNW8 380 aa8.86□□□□□ -0.99
VPS16-208ENST00000487461 C14orf166Q9Y224 244 aaKnown RBP8.86□□□□□ -0.99
VPS16-208ENST00000487461 IGHV4-28A0A0C4DH34 117 aa8.85□□□□□ -0.99
VPS16-208ENST00000487461 CRYM-AS1A6NIL9 109 aa8.85□□□□□ -0.99
VPS16-208ENST00000487461 DISC1C4P0D8 188 aa8.85□□□□□ -0.99
VPS16-208ENST00000487461 RGS5O15539 181 aa8.85□□□□□ -0.99
VPS16-208ENST00000487461 SCGB2A1O75556 95 aa8.85□□□□□ -0.99
VPS16-208ENST00000487461 NXPH3O95157 252 aa8.85□□□□□ -0.99
VPS16-208ENST00000487461 C4BPBP20851 252 aa8.85□□□□□ -0.99
VPS16-208ENST00000487461 RND2P52198 227 aa8.85□□□□□ -0.99
VPS16-208ENST00000487461 MRPS10P82664 201 aaKnown RBP8.85□□□□□ -0.99
VPS16-208ENST00000487461 ACTL10Q5JWF8 245 aa8.85□□□□□ -0.99
VPS16-208ENST00000487461 TMEM268Q5VZI3 342 aa8.85□□□□□ -0.99
VPS16-208ENST00000487461 MORN3Q6PF18 240 aaPredicted RBP8.85□□□□□ -0.99
VPS16-208ENST00000487461 C16orf54Q6UWD8 224 aa8.85□□□□□ -0.99
VPS16-208ENST00000487461 RNASEH2CQ8TDP1 164 aaKnown RBP8.85□□□□□ -0.99
VPS16-208ENST00000487461 Q8WTZ3 238 aa8.85□□□□□ -0.99
VPS16-208ENST00000487461 GLMPQ8WWB7 406 aa8.85□□□□□ -0.99
VPS16-208ENST00000487461 NARS2Q96I59 477 aaKnown RBP8.85□□□□□ -0.99
VPS16-208ENST00000487461 RAB40CQ96S21 281 aa8.85□□□□□ -0.99
VPS16-208ENST00000487461 APLNQ9ULZ1 77 aa8.85□□□□□ -0.99
VPS16-208ENST00000487461 CEBPZOSA8MTT3 80 aa8.84□□□□□ -0.99
VPS16-208ENST00000487461 ZNF705EA8MWA4 302 aaPredicted RBP8.84□□□□□ -0.99
VPS16-208ENST00000487461 IGLL5B9A064 214 aa8.84□□□□□ -0.99
VPS16-208ENST00000487461 HNRNPCP07910 306 aaKnown RBP eCLIP8.84□□□□□ -0.99
VPS16-208ENST00000487461 SPP1P10451 314 aa8.84□□□□□ -0.99
VPS16-208ENST00000487461 SLC25A4P12235 298 aa8.84□□□□□ -0.99
VPS16-208ENST00000487461 OR10J1P30954 320 aa8.84□□□□□ -0.99
VPS16-208ENST00000487461 YPEL3P61236 119 aaPredicted RBP8.84□□□□□ -0.99
VPS16-208ENST00000487461 DHRS2Q13268 280 aa8.84□□□□□ -0.99
VPS16-208ENST00000487461 SURF2Q15527 256 aaPredicted RBP8.84□□□□□ -0.99
VPS16-208ENST00000487461 CSNK1G2-AS1Q8NCQ2 148 aa8.84□□□□□ -0.99
VPS16-208ENST00000487461 SLC24A4Q8NFF2 622 aa8.84□□□□□ -0.99
VPS16-208ENST00000487461 OR4C16Q8NGL9 310 aa8.84□□□□□ -0.99
VPS16-208ENST00000487461 SMIM4Q8WVI0 70 aa8.84□□□□□ -0.99
VPS16-208ENST00000487461 NPIPB3Q92617 1050 aa8.84□□□□□ -0.99
VPS16-208ENST00000487461 HRH4Q9H3N8 390 aa8.84□□□□□ -0.99
VPS16-208ENST00000487461 CLEC5AQ9NY25 188 aa8.84□□□□□ -0.99
VPS16-208ENST00000487461 PRR13Q9NZ81 148 aa8.84□□□□□ -0.99
VPS16-208ENST00000487461 TMEM56-RWDD3S4R434 201 aa8.84□□□□□ -0.99
VPS16-208ENST00000487461 X6R8D5 127 aa8.84□□□□□ -0.99
VPS16-208ENST00000487461 ELOA3CA0A087WX78 387 aaPredicted RBP8.83□□□□□ -1
VPS16-208ENST00000487461 HELTA6NFD8 242 aa8.83□□□□□ -1
VPS16-208ENST00000487461 AKAIN1P0CW23 69 aa8.83□□□□□ -1
VPS16-208ENST00000487461 HLA-DMBP28068 263 aa8.83□□□□□ -1
VPS16-208ENST00000487461 BCAP31P51572 246 aa8.83□□□□□ -1
VPS16-208ENST00000487461 TCTAP57738 103 aa8.83□□□□□ -1
VPS16-208ENST00000487461 USF2Q15853 346 aaPredicted RBP8.83□□□□□ -1
VPS16-208ENST00000487461 TMEM41BQ5BJD5 291 aa8.83□□□□□ -1
VPS16-208ENST00000487461 NMSQ5H8A3 153 aa8.83□□□□□ -1
VPS16-208ENST00000487461 PSMG4Q5JS54 123 aa8.83□□□□□ -1
VPS16-208ENST00000487461 OR51S1Q8NGJ8 323 aa8.83□□□□□ -1
VPS16-208ENST00000487461 MCFD2Q8NI22 146 aa8.83□□□□□ -1
VPS16-208ENST00000487461 DIRAS2Q96HU8 199 aa8.83□□□□□ -1
VPS16-208ENST00000487461 DNAH10Q8IVF4 4471 aa8.83□□□□□ -1
VPS16-208ENST00000487461 C11orf94C9JXX5 98 aa8.82□□□□□ -1
VPS16-208ENST00000487461 CTDSPLO15194 276 aa8.82□□□□□ -1
VPS16-208ENST00000487461 RD3LP0DJH9 198 aa8.82□□□□□ -1
VPS16-208ENST00000487461 MIFP14174 115 aa8.82□□□□□ -1
VPS16-208ENST00000487461 NPY1RP25929 384 aa8.82□□□□□ -1
VPS16-208ENST00000487461 EIF2B2P49770 351 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms