RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 FCER1GP30273 86 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 BRWD1-AS2P59051 145 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 RIGQ13278 110 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 UFSP1Q6NVU6 142 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 MOB3BQ86TA1 216 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 LRRC29Q8WV35 223 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 FAM173AQ9BQD7 235 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 SLC25A33Q9BSK2 321 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 LINC00470Q9BZP3 86 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 SSUH2Q9Y2M2 353 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 DOCK10Q96BY6 2186 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 GAGE12HA6NDE8 117 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 CRXO43186 299 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-209ENST00000487188 FAM87AP0C7U9 286 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 LTBRP36941 435 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 CACNG7P62955 275 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 RNFT1Q5M7Z0 435 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 FAM214BQ7L5A3 538 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 COQ2Q96H96 371 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 MRPS17Q9Y2R5 130 aaKnown RBP5.11□□□□□ -1.59
VPS13D-209ENST00000487188 F2RL2O00254 374 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 MYOD1P15172 320 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 ORM2P19652 201 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 CYB561P49447 251 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 B3GALT5-AS1P59052 145 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 CCL7P80098 99 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 ERHP84090 104 aaKnown RBP5.1□□□□□ -1.59
VPS13D-209ENST00000487188 LINC01545Q5VT33 79 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 GUSBP11Q6P575 273 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 C2orf91Q6ZV80 131 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 ZNF414Q96IQ9 312 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 GPR82Q96P67 336 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 ZNF503-AS2A6NEH8 195 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 C19orf67A6NJJ6 358 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 AHRRA9YTQ3 701 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 SLC25A17O43808 307 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 KLF7O75840 302 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-209ENST00000487188 DKK1O94907 266 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 COX6A1P12074 109 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 CD300EQ496F6 205 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-209ENST00000487188 FAM120AOSQ5T036 256 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 Q6ZR03 302 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 NEGR1Q7Z3B1 354 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 WDR86Q86TI4 376 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 FLYWCH2Q96CP2 140 aaKnown RBP5.1□□□□□ -1.59
VPS13D-209ENST00000487188 PROK2Q9HC23 129 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 RAB9BQ9NP90 201 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 DNAJC13O75165 2243 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 IGLV3-19P01714 112 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 LINC00696Q6ZRV3 163 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 ZNF329Q86UD4 541 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 OR2Z1Q8NG97 314 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 LEAP2Q969E1 77 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 ZNF48Q96MX3 618 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-209ENST00000487188 IFI27L2Q9H2X8 130 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 JPT1Q9UK76 154 aa5.1□□□□□ -1.59
VPS13D-209ENST00000487188 HEATR1Q9H583 2144 aaKnown RBP5.1□□□□□ -1.59
VPS13D-209ENST00000487188 PRSS46E5RG02 174 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 H3BTX0 84 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 CEACAM3P40198 252 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 ABHD17BQ5VST6 288 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 MBD6Q96DN6 1003 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 ZNF503Q96F45 646 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 URB1-AS1Q96HZ7 61 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 NHP2Q9NX24 153 aaKnown RBP5.09□□□□□ -1.59
VPS13D-209ENST00000487188 LOXL2Q9Y4K0 774 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 BRWD1Q9NSI6 2320 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 TRAV26-1A0A087WT03 109 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 KBTBD11-OT1A0A1B0GTJ5 212 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 CT45A6P0DMU7 189 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 CT45A5P0DMU8 189 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 CT45A7P0DMV0 189 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 ERVK11-1P61568 191 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 ALKBH6Q3KRA9 238 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 CT45A1Q5HYN5 189 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 ACP7Q6ZNF0 438 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 MTURNQ8N3F0 131 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 CT45A3Q8NHU0 189 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 CXXC4Q9H2H0 198 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 EPDR1Q9UM22 224 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 DMDP11532 3685 aa5.09□□□□□ -1.59
VPS13D-209ENST00000487188 IGHV5-10-1A0A0J9YXX1 117 aa5.09□□□□□ -1.6
VPS13D-209ENST00000487188 A0A1B0GXF2 115 aa5.09□□□□□ -1.6
VPS13D-209ENST00000487188 hADV38S2A0JD32 116 aa5.09□□□□□ -1.6
VPS13D-209ENST00000487188 IGHV3-48P01763 117 aa5.09□□□□□ -1.6
VPS13D-209ENST00000487188 HOXA4Q00056 320 aaPredicted RBP5.09□□□□□ -1.6
VPS13D-209ENST00000487188 EIF4EBP1Q13541 118 aaPredicted RBP5.09□□□□□ -1.6
VPS13D-209ENST00000487188 C3AR1Q16581 482 aa5.09□□□□□ -1.6
VPS13D-209ENST00000487188 PRSS57Q6UWY2 283 aa5.09□□□□□ -1.6
VPS13D-209ENST00000487188 PRNTQ86SH4 94 aa5.09□□□□□ -1.6
VPS13D-209ENST00000487188 SLC25A45Q8N413 288 aa5.09□□□□□ -1.6
VPS13D-209ENST00000487188 SLC25A2Q9BXI2 301 aa5.09□□□□□ -1.6
VPS13D-209ENST00000487188 GEMIN7Q9H840 131 aaKnown RBP5.09□□□□□ -1.6
VPS13D-209ENST00000487188 METRNQ9UJH8 293 aa5.09□□□□□ -1.6
VPS13D-209ENST00000487188 FZR1Q9UM11 496 aa5.09□□□□□ -1.6
VPS13D-209ENST00000487188 FOXA2Q9Y261 457 aaPredicted RBP5.09□□□□□ -1.6
VPS13D-209ENST00000487188 TPRP12270 2363 aaKnown RBP5.09□□□□□ -1.6
VPS13D-209ENST00000487188 NCOR1O75376 2440 aa5.09□□□□□ -1.6
VPS13D-209ENST00000487188 A0A1B0GUT8 65 aa5.08□□□□□ -1.6
VPS13D-209ENST00000487188 DLL1O00548 723 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms