RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 IGKV1D-37A0A075B6S9 117 aa9.83□□□□□ -0.84
HDAC6-229ENST00000486665 IGHV4OR15-8A0A075B7B6 117 aa9.83□□□□□ -0.84
HDAC6-229ENST00000486665 A0A087WW49 117 aa9.83□□□□□ -0.84
HDAC6-229ENST00000486665 SMCO3A2RU48 225 aa9.83□□□□□ -0.84
HDAC6-229ENST00000486665 NUDT19A8MXV4 375 aa9.83□□□□□ -0.84
HDAC6-229ENST00000486665 CLN5O75503 358 aa9.83□□□□□ -0.84
HDAC6-229ENST00000486665 TSPAN15O95858 294 aa9.83□□□□□ -0.84
HDAC6-229ENST00000486665 CTSGP08311 255 aa9.83□□□□□ -0.84
HDAC6-229ENST00000486665 ADMP35318 185 aa9.83□□□□□ -0.84
HDAC6-229ENST00000486665 NPBWR1P48145 328 aa9.83□□□□□ -0.84
HDAC6-229ENST00000486665 EIF2B2P49770 351 aaKnown RBP9.83□□□□□ -0.84
HDAC6-229ENST00000486665 HBG1P69891 147 aa9.83□□□□□ -0.84
HDAC6-229ENST00000486665 HBG2P69892 147 aa9.83□□□□□ -0.84
HDAC6-229ENST00000486665 RUNX1Q01196 453 aa9.83□□□□□ -0.84
HDAC6-229ENST00000486665 ATP6V1FQ16864 119 aa9.83□□□□□ -0.84
HDAC6-229ENST00000486665 VWC2Q2TAL6 325 aa9.83□□□□□ -0.84
HDAC6-229ENST00000486665 LGALSLQ3ZCW2 172 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-229ENST00000486665 ZFP69Q49AA0 526 aa9.83□□□□□ -0.84
HDAC6-229ENST00000486665 NDUFA11Q86Y39 141 aa9.83□□□□□ -0.84
HDAC6-229ENST00000486665 C4orf3Q8WVX3 66 aa9.83□□□□□ -0.84
HDAC6-229ENST00000486665 ZNF414Q96IQ9 312 aa9.83□□□□□ -0.84
HDAC6-229ENST00000486665 FBXL17Q9UF56 701 aa9.83□□□□□ -0.84
HDAC6-229ENST00000486665 DNAH3Q8TD57 4116 aa9.83□□□□□ -0.84
HDAC6-229ENST00000486665 IGKV1OR2-108A0A075B7D4 117 aa9.82□□□□□ -0.84
HDAC6-229ENST00000486665 FNDC10F2Z333 226 aa9.82□□□□□ -0.84
HDAC6-229ENST00000486665 BMPR1BO00238 502 aa9.82□□□□□ -0.84
HDAC6-229ENST00000486665 GNG7O60262 68 aa9.82□□□□□ -0.84
HDAC6-229ENST00000486665 SCAF4O95104 1147 aaKnown RBP9.82□□□□□ -0.84
HDAC6-229ENST00000486665 HSPB1P04792 205 aaKnown RBP9.82□□□□□ -0.84
HDAC6-229ENST00000486665 IGLC1P0CG04 106 aa9.82□□□□□ -0.84
HDAC6-229ENST00000486665 TIGITQ495A1 244 aa9.82□□□□□ -0.84
HDAC6-229ENST00000486665 TMEM144Q7Z5S9 345 aa9.82□□□□□ -0.84
HDAC6-229ENST00000486665 LILRB2Q8N423 598 aa9.82□□□□□ -0.84
HDAC6-229ENST00000486665 KCNRGQ8N5I3 272 aa9.82□□□□□ -0.84
HDAC6-229ENST00000486665 THAP8Q8NA92 274 aa9.82□□□□□ -0.84
HDAC6-229ENST00000486665 OR1N2Q8NGR9 330 aa9.82□□□□□ -0.84
HDAC6-229ENST00000486665 RAX2Q96IS3 184 aa9.82□□□□□ -0.84
HDAC6-229ENST00000486665 HYLS1Q96M11 299 aa9.82□□□□□ -0.84
HDAC6-229ENST00000486665 TMEM147Q9BVK8 224 aa9.82□□□□□ -0.84
HDAC6-229ENST00000486665 NPVFQ9HCQ7 196 aa9.82□□□□□ -0.84
HDAC6-229ENST00000486665 UQCC1Q9NVA1 299 aa9.82□□□□□ -0.84
HDAC6-229ENST00000486665 IGHV3-35A0A0C4DH35 117 aa9.81□□□□□ -0.84
HDAC6-229ENST00000486665 TGOLN2O43493 480 aa9.81□□□□□ -0.84
HDAC6-229ENST00000486665 OR2C1O95371 312 aa9.81□□□□□ -0.84
HDAC6-229ENST00000486665 IGKV1-17P01599 117 aa9.81□□□□□ -0.84
HDAC6-229ENST00000486665 OR10J1P30954 320 aa9.81□□□□□ -0.84
HDAC6-229ENST00000486665 ARL3P36405 182 aa9.81□□□□□ -0.84
HDAC6-229ENST00000486665 NKX2-5P52952 324 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-229ENST00000486665 AKR1C1Q04828 323 aa9.81□□□□□ -0.84
HDAC6-229ENST00000486665 OR2F1Q13607 317 aa9.81□□□□□ -0.84
HDAC6-229ENST00000486665 OR11H1Q8NG94 326 aa9.81□□□□□ -0.84
HDAC6-229ENST00000486665 ATP6V0BQ99437 205 aa9.81□□□□□ -0.84
HDAC6-229ENST00000486665 ATP5SQ99766 215 aa9.81□□□□□ -0.84
HDAC6-229ENST00000486665 WDR83OSQ9Y284 106 aa9.81□□□□□ -0.84
HDAC6-229ENST00000486665 UBE2L5PA0A1B0GUS4 154 aa9.8□□□□□ -0.84
HDAC6-229ENST00000486665 M0QZ24 198 aa9.8□□□□□ -0.84
HDAC6-229ENST00000486665 CCL24O00175 119 aa9.8□□□□□ -0.84
HDAC6-229ENST00000486665 ZNF90Q03938 601 aa9.8□□□□□ -0.84
HDAC6-229ENST00000486665 LAMTOR1Q6IAA8 161 aa9.8□□□□□ -0.84
HDAC6-229ENST00000486665 TMEM182Q6ZP80 229 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-229ENST00000486665 TMUB2Q71RG4 321 aa9.8□□□□□ -0.84
HDAC6-229ENST00000486665 CYTL1Q9NRR1 136 aa9.8□□□□□ -0.84
HDAC6-229ENST00000486665 GAR1Q9NY12 217 aaKnown RBP9.8□□□□□ -0.84
HDAC6-229ENST00000486665 LSM4Q9Y4Z0 139 aaKnown RBP9.8□□□□□ -0.84
HDAC6-229ENST00000486665 TRAV30A0A087WSZ9 112 aa9.79□□□□□ -0.84
HDAC6-229ENST00000486665 A0A0D9SG52 128 aa9.79□□□□□ -0.84
HDAC6-229ENST00000486665 ZFP92A6NM28 416 aa9.79□□□□□ -0.84
HDAC6-229ENST00000486665 LINC01619G3V211 115 aa9.79□□□□□ -0.84
HDAC6-229ENST00000486665 BOLA2-SMG1P6H3BVE0 249 aa9.79□□□□□ -0.84
HDAC6-229ENST00000486665 NUPL2O15504 423 aaKnown RBP9.79□□□□□ -0.84
HDAC6-229ENST00000486665 GGCTO75223 188 aaKnown RBP9.79□□□□□ -0.84
HDAC6-229ENST00000486665 DFFBO76075 338 aa9.79□□□□□ -0.84
HDAC6-229ENST00000486665 GATA2P23769 480 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-229ENST00000486665 SLURP1P55000 103 aa9.79□□□□□ -0.84
HDAC6-229ENST00000486665 ZNF345Q14585 488 aa9.79□□□□□ -0.84
HDAC6-229ENST00000486665 FAM209BQ5JX69 171 aa9.79□□□□□ -0.84
HDAC6-229ENST00000486665 RPL7L1Q6DKI1 246 aaKnown RBP9.79□□□□□ -0.84
HDAC6-229ENST00000486665 SPSB3Q6PJ21 355 aa9.79□□□□□ -0.84
HDAC6-229ENST00000486665 TEPPQ6URK8 271 aa9.79□□□□□ -0.84
HDAC6-229ENST00000486665 BTNL8Q6UX41 500 aa9.79□□□□□ -0.84
HDAC6-229ENST00000486665 C9orf62Q8N4C0 152 aa9.79□□□□□ -0.84
HDAC6-229ENST00000486665 DPF1Q92782 380 aa9.79□□□□□ -0.84
HDAC6-229ENST00000486665 TRGV9Q99603 122 aa9.79□□□□□ -0.84
HDAC6-229ENST00000486665 MGST2Q99735 147 aa9.79□□□□□ -0.84
HDAC6-229ENST00000486665 FGF7P21781 194 aa9.78□□□□□ -0.84
HDAC6-229ENST00000486665 HOXD3P31249 432 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-229ENST00000486665 YPEL3P61236 119 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-229ENST00000486665 ZNF616Q08AN1 781 aa9.78□□□□□ -0.84
HDAC6-229ENST00000486665 FHL3Q13643 280 aa9.78□□□□□ -0.84
HDAC6-229ENST00000486665 CYP2G1PQ6ZSU1 146 aa9.78□□□□□ -0.84
HDAC6-229ENST00000486665 WDR61Q9GZS3 305 aaKnown RBP9.78□□□□□ -0.84
HDAC6-229ENST00000486665 ARL6Q9H0F7 186 aa9.78□□□□□ -0.84
HDAC6-229ENST00000486665 SLC45A2Q9UMX9 530 aa9.78□□□□□ -0.84
HDAC6-229ENST00000486665 RFNGQ9Y644 331 aa9.78□□□□□ -0.84
HDAC6-229ENST00000486665 IGHV3OR16-8A0A075B7F1 116 aa9.77□□□□□ -0.85
HDAC6-229ENST00000486665 TAAR5O14804 337 aa9.77□□□□□ -0.85
HDAC6-229ENST00000486665 AGPAT2O15120 278 aa9.77□□□□□ -0.85
HDAC6-229ENST00000486665 IFNA5P01569 189 aa9.77□□□□□ -0.85
HDAC6-229ENST00000486665 RD3LP0DJH9 198 aa9.77□□□□□ -0.85
HDAC6-229ENST00000486665 PSG1P11464 419 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms