RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 TRAV38-1A0A0B4J264 116 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 hADV38S2A0JD32 116 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 PRSS46E5RG02 174 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 TMEM178BH3BS89 294 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 GZMBP10144 247 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 OR10J1P30954 320 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 GPX4P36969 197 aaPredicted RBP7.28□□□□□ -1.24
COL12A1-208ENST00000486533 ATP5G3P48201 142 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 HILS1P60008 231 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 PRCDQ00LT1 54 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 ZNF90Q03938 601 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 LTC4SQ16873 150 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 TMEM155Q4W5P6 130 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 C12orf54Q6X4T0 127 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 MOGAT3Q86VF5 341 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 OR5B3Q8NH48 314 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 SGMS2Q8NHU3 365 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 GATAD1Q8WUU5 269 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 DDB2Q92466 427 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 SDSLQ96GA7 329 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 RHOVQ96L33 236 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 JMJD8Q96S16 334 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 C2orf88Q9BSF0 95 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 ELOVL1Q9BW60 279 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 GAL3ST2Q9H3Q3 398 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 PATZ1Q9HBE1 687 aaKnown RBP7.28□□□□□ -1.24
COL12A1-208ENST00000486533 TPSG1Q9NRR2 321 aa7.28□□□□□ -1.24
COL12A1-208ENST00000486533 KIAA2026Q5HYC2 2103 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 PPIAL4EA0A075B759 164 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 TRBV23-1A0A0A0MS06 115 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 PPIAL4CA0A0B4J2A2 164 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 A0A1W2PN81 502 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 ZNF705GA8MUZ8 300 aaPredicted RBP7.27□□□□□ -1.25
COL12A1-208ENST00000486533 PPIAL4DF5H284 164 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 LHBP01229 141 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 OR10J4P0C629 311 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 PPIAL4FP0DN26 164 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 LOXL3P58215 753 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 MEF2CQ06413 473 aaPredicted RBP7.27□□□□□ -1.25
COL12A1-208ENST00000486533 TIGITQ495A1 244 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 SPINK9Q5DT21 86 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 MIC13Q5XKP0 118 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 OR4A47Q6IF82 309 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 FAM71F2Q6NXP2 309 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 TEX38Q6PEX7 206 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 ZNF600Q6ZNG1 722 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 Q8N7P7 452 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 TPRX1Q8N7U7 411 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 STPG3Q8N7X2 389 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 DEFB108BQ8NET1 73 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 OR5T1Q8NG75 326 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 OR4A5Q8NH83 315 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 VSTM2AQ8TAG5 236 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 OSR1Q8TAX0 266 aaPredicted RBP7.27□□□□□ -1.25
COL12A1-208ENST00000486533 CMTM2Q8TAZ6 248 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 C14orf144Q96I85 54 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 OR51B2Q9Y5P1 312 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 DOCK11Q5JSL3 2073 aa7.27□□□□□ -1.25
COL12A1-208ENST00000486533 M0QZK8 103 aa7.26□□□□□ -1.25
COL12A1-208ENST00000486533 UPK2O00526 184 aa7.26□□□□□ -1.25
COL12A1-208ENST00000486533 SLC31A2O15432 143 aa7.26□□□□□ -1.25
COL12A1-208ENST00000486533 RD3LP0DJH9 198 aa7.26□□□□□ -1.25
COL12A1-208ENST00000486533 EGR1P18146 543 aa7.26□□□□□ -1.25
COL12A1-208ENST00000486533 GNG4P50150 75 aa7.26□□□□□ -1.25
COL12A1-208ENST00000486533 SUB1P53999 127 aaKnown RBP eCLIP7.26□□□□□ -1.25
COL12A1-208ENST00000486533 TAS2R60P59551 318 aa7.26□□□□□ -1.25
COL12A1-208ENST00000486533 BPIFB3P59826 476 aa7.26□□□□□ -1.25
COL12A1-208ENST00000486533 RPL15P61313 204 aaKnown RBP7.26□□□□□ -1.25
COL12A1-208ENST00000486533 SELENOTP62341 195 aa7.26□□□□□ -1.25
COL12A1-208ENST00000486533 C2orf83Q53S99 150 aa7.26□□□□□ -1.25
COL12A1-208ENST00000486533 RPL39P5Q59GN2 51 aa7.26□□□□□ -1.25
COL12A1-208ENST00000486533 OR1L4Q8NGR5 311 aa7.26□□□□□ -1.25
COL12A1-208ENST00000486533 OR1L8Q8NGR8 309 aa7.26□□□□□ -1.25
COL12A1-208ENST00000486533 Q8TCH9 128 aa7.26□□□□□ -1.25
COL12A1-208ENST00000486533 CACNG8Q8WXS5 425 aa7.26□□□□□ -1.25
COL12A1-208ENST00000486533 SSBP3Q9BWW4 388 aaPredicted RBP7.26□□□□□ -1.25
COL12A1-208ENST00000486533 LINC00574Q9H8X3 128 aa7.26□□□□□ -1.25
COL12A1-208ENST00000486533 BET1LQ9NYM9 111 aa7.26□□□□□ -1.25
COL12A1-208ENST00000486533 SAA2-SAA4A0A096LPE2 208 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 J3QR06 171 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 RRHO14718 337 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 SCGB1D1O95968 90 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 SAA2P0DJI9 122 aaPredicted RBP7.25□□□□□ -1.25
COL12A1-208ENST00000486533 CGB3P0DN86 165 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 CGB7P0DN87 165 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 RPS16P62249 146 aaKnown RBP7.25□□□□□ -1.25
COL12A1-208ENST00000486533 RPL31P62899 125 aaKnown RBP7.25□□□□□ -1.25
COL12A1-208ENST00000486533 ERHP84090 104 aaKnown RBP7.25□□□□□ -1.25
COL12A1-208ENST00000486533 FAM201AQ5SY85 155 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 STUMQ69YW2 141 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 LYG1Q8N1E2 194 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 MS4A10Q96PG2 267 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 GNB1LQ9BYB4 327 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 OSTCQ9NRP0 149 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 SLC35D1Q9NTN3 355 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 POLR3KQ9Y2Y1 108 aaPredicted RBP7.25□□□□□ -1.25
COL12A1-208ENST00000486533 INSIG2Q9Y5U4 225 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 LINC00312Q9Y6C7 94 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 SCO2A0A1W2PP80 73 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 A0A1W2PRE2 83 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms