RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 NDUFA13Q9P0J0 144 aa13.62□□□□□ -0.23
CLDN11-206ENST00000486429 U3KQ87 197 aa13.62□□□□□ -0.23
CLDN11-206ENST00000486429 IGHV3-66A0A0C4DH42 116 aa13.61□□□□□ -0.23
CLDN11-206ENST00000486429 SFT2D2O95562 160 aa13.61□□□□□ -0.23
CLDN11-206ENST00000486429 APOHP02749 345 aaPredicted RBP13.61□□□□□ -0.23
CLDN11-206ENST00000486429 IGLC1P0CG04 106 aa13.61□□□□□ -0.23
CLDN11-206ENST00000486429 APOC4P55056 127 aa13.61□□□□□ -0.23
CLDN11-206ENST00000486429 FAM90A2PQ658T7 463 aa13.61□□□□□ -0.23
CLDN11-206ENST00000486429 A6NHS1 94 aa13.6□□□□□ -0.23
CLDN11-206ENST00000486429 NPPCP23582 126 aa13.6□□□□□ -0.23
CLDN11-206ENST00000486429 OR10J1P30954 320 aa13.6□□□□□ -0.23
CLDN11-206ENST00000486429 UBE2MP61081 183 aaKnown RBP13.6□□□□□ -0.23
CLDN11-206ENST00000486429 PAFAH1B2P68402 229 aa13.6□□□□□ -0.23
CLDN11-206ENST00000486429 GBGT1Q8N5D6 347 aa13.6□□□□□ -0.23
CLDN11-206ENST00000486429 ACY3Q96HD9 319 aa13.6□□□□□ -0.23
CLDN11-206ENST00000486429 NARS2Q96I59 477 aaKnown RBP13.6□□□□□ -0.23
CLDN11-206ENST00000486429 TMED3Q9Y3Q3 217 aa13.6□□□□□ -0.23
CLDN11-206ENST00000486429 A0A1W2PS18 150 aa13.59□□□□□ -0.23
CLDN11-206ENST00000486429 PITX3O75364 302 aa13.59□□□□□ -0.23
CLDN11-206ENST00000486429 NDUFB6O95139 128 aa13.59□□□□□ -0.23
CLDN11-206ENST00000486429 SLC25A6P12236 298 aa13.59□□□□□ -0.23
CLDN11-206ENST00000486429 CMC4P56277 68 aaPredicted RBP13.59□□□□□ -0.23
CLDN11-206ENST00000486429 ATP5IP56385 69 aaPredicted RBP13.59□□□□□ -0.23
CLDN11-206ENST00000486429 SDHCQ99643 169 aaPredicted RBP13.59□□□□□ -0.23
CLDN11-206ENST00000486429 LINC00854A0A1B0GVQ3 168 aa13.58□□□□□ -0.24
CLDN11-206ENST00000486429 CENPXA8MT69 81 aa13.58□□□□□ -0.24
CLDN11-206ENST00000486429 FAM90A26D6RGX4 464 aa13.58□□□□□ -0.24
CLDN11-206ENST00000486429 DFFBO76075 338 aa13.58□□□□□ -0.24
CLDN11-206ENST00000486429 IFNA4P05014 189 aa13.58□□□□□ -0.24
CLDN11-206ENST00000486429 IL7P13232 177 aa13.58□□□□□ -0.24
CLDN11-206ENST00000486429 CRYBB3P26998 211 aa13.58□□□□□ -0.24
CLDN11-206ENST00000486429 YPEL3P61236 119 aaPredicted RBP13.58□□□□□ -0.24
CLDN11-206ENST00000486429 RPL11P62913 178 aaKnown RBP13.58□□□□□ -0.24
CLDN11-206ENST00000486429 ZFAND6Q6FIF0 208 aa13.58□□□□□ -0.24
CLDN11-206ENST00000486429 Q8WTZ3 238 aa13.58□□□□□ -0.24
CLDN11-206ENST00000486429 NPIPB3Q92617 1050 aa13.58□□□□□ -0.24
CLDN11-206ENST00000486429 MAP6D1Q9H9H5 199 aa13.58□□□□□ -0.24
CLDN11-206ENST00000486429 HOXB5P09067 269 aa13.57□□□□□ -0.24
CLDN11-206ENST00000486429 IAPPP10997 89 aa13.57□□□□□ -0.24
CLDN11-206ENST00000486429 P2RY1P47900 373 aa13.57□□□□□ -0.24
CLDN11-206ENST00000486429 APRG1Q8IVJ8 170 aa13.57□□□□□ -0.24
CLDN11-206ENST00000486429 LILRB2Q8N423 598 aa13.57□□□□□ -0.24
CLDN11-206ENST00000486429 GRAMD2BQ96HH9 432 aa13.57□□□□□ -0.24
CLDN11-206ENST00000486429 C7orf50Q9BRJ6 194 aaKnown RBP13.57□□□□□ -0.24
CLDN11-206ENST00000486429 MS4A6AQ9H2W1 248 aa13.57□□□□□ -0.24
CLDN11-206ENST00000486429 TRAV2A0A0B4J234 112 aa13.56□□□□□ -0.24
CLDN11-206ENST00000486429 KIR2DL5BA0A0G2JN68 375 aa13.56□□□□□ -0.24
CLDN11-206ENST00000486429 KIR2DL5BA0A0G2JPC4 375 aa13.56□□□□□ -0.24
CLDN11-206ENST00000486429 DNASE2O00115 360 aaPredicted RBP13.56□□□□□ -0.24
CLDN11-206ENST00000486429 MED6O75586 246 aa13.56□□□□□ -0.24
CLDN11-206ENST00000486429 RPL35AP18077 110 aaKnown RBP13.56□□□□□ -0.24
CLDN11-206ENST00000486429 GGNBP1Q5YKI7 109 aa13.56□□□□□ -0.24
CLDN11-206ENST00000486429 WFDC3Q8IUB2 231 aa13.56□□□□□ -0.24
CLDN11-206ENST00000486429 KIR2DL5AQ8N109 375 aa13.56□□□□□ -0.24
CLDN11-206ENST00000486429 STPG3Q8N7X2 389 aa13.56□□□□□ -0.24
CLDN11-206ENST00000486429 KIR2DL5BQ8NHK3 375 aa13.56□□□□□ -0.24
CLDN11-206ENST00000486429 SLC35E1Q96K37 410 aa13.56□□□□□ -0.24
CLDN11-206ENST00000486429 OVOL2Q9BRP0 275 aa13.56□□□□□ -0.24
CLDN11-206ENST00000486429 C9orf170A2RU37 121 aa13.55□□□□□ -0.24
CLDN11-206ENST00000486429 UBE2CO00762 179 aa13.55□□□□□ -0.24
CLDN11-206ENST00000486429 TOMM40O96008 361 aa13.55□□□□□ -0.24
CLDN11-206ENST00000486429 IL4P05112 153 aa13.55□□□□□ -0.24
CLDN11-206ENST00000486429 HNRNPCP07910 306 aaKnown RBP eCLIP13.55□□□□□ -0.24
CLDN11-206ENST00000486429 RAB11AP62491 216 aa13.55□□□□□ -0.24
CLDN11-206ENST00000486429 ZNF124Q15973 351 aa13.55□□□□□ -0.24
CLDN11-206ENST00000486429 DEFB135Q30KP9 77 aa13.55□□□□□ -0.24
CLDN11-206ENST00000486429 Q6ZWC4 215 aa13.55□□□□□ -0.24
CLDN11-206ENST00000486429 STXBP6Q8NFX7 210 aa13.55□□□□□ -0.24
CLDN11-206ENST00000486429 CIB3Q96Q77 187 aaPredicted RBP13.55□□□□□ -0.24
CLDN11-206ENST00000486429 RABAC1Q9UI14 185 aa13.55□□□□□ -0.24
CLDN11-206ENST00000486429 PAIP2BQ9ULR5 123 aaKnown RBP13.55□□□□□ -0.24
CLDN11-206ENST00000486429 FLVCR2Q9UPI3 526 aa13.55□□□□□ -0.24
CLDN11-206ENST00000486429 TP53TG1Q9Y2A0 90 aa13.55□□□□□ -0.24
CLDN11-206ENST00000486429 BTCP35070 178 aa13.54□□□□□ -0.24
CLDN11-206ENST00000486429 GPX4P36969 197 aaPredicted RBP13.54□□□□□ -0.24
CLDN11-206ENST00000486429 USF2Q15853 346 aaPredicted RBP13.54□□□□□ -0.24
CLDN11-206ENST00000486429 COQ8AQ8NI60 647 aa13.54□□□□□ -0.24
CLDN11-206ENST00000486429 IL17DQ8TAD2 202 aa13.54□□□□□ -0.24
CLDN11-206ENST00000486429 DYNC2H1Q8NCM8 4307 aaKnown RBP13.53□□□□□ -0.24
CLDN11-206ENST00000486429 ZFP92A6NM28 416 aa13.53□□□□□ -0.24
CLDN11-206ENST00000486429 SYNGR2O43760 224 aa13.53□□□□□ -0.24
CLDN11-206ENST00000486429 OR4E1P0C645 316 aa13.53□□□□□ -0.24
CLDN11-206ENST00000486429 RD3LP0DJH9 198 aa13.53□□□□□ -0.24
CLDN11-206ENST00000486429 EIF2B2P49770 351 aaKnown RBP13.53□□□□□ -0.24
CLDN11-206ENST00000486429 DHRS2Q13268 280 aa13.53□□□□□ -0.24
CLDN11-206ENST00000486429 C4orf46Q504U0 113 aa13.53□□□□□ -0.24
CLDN11-206ENST00000486429 LYG2Q86SG7 212 aa13.53□□□□□ -0.24
CLDN11-206ENST00000486429 MAGT1Q9H0U3 335 aa13.53□□□□□ -0.24
CLDN11-206ENST00000486429 HELTA6NFD8 242 aa13.52□□□□□ -0.25
CLDN11-206ENST00000486429 SPRY2O43597 315 aa13.52□□□□□ -0.25
CLDN11-206ENST00000486429 ADAP1O75689 374 aa13.52□□□□□ -0.25
CLDN11-206ENST00000486429 PSG1P11464 419 aa13.52□□□□□ -0.25
CLDN11-206ENST00000486429 ANXA7P20073 488 aaKnown RBP13.52□□□□□ -0.25
CLDN11-206ENST00000486429 DEFB131AP59861 70 aa13.52□□□□□ -0.25
CLDN11-206ENST00000486429 RPP30P78346 268 aaKnown RBP13.52□□□□□ -0.25
CLDN11-206ENST00000486429 FAM24BQ8N5W8 94 aa13.52□□□□□ -0.25
CLDN11-206ENST00000486429 U3KQE9 123 aa13.52□□□□□ -0.25
CLDN11-206ENST00000486429 K7EQG2 157 aa13.51□□□□□ -0.25
CLDN11-206ENST00000486429 WRBO00258 174 aa13.51□□□□□ -0.25
CLDN11-206ENST00000486429 IFNA21P01568 189 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms