RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 NPPCP23582 126 aa9.6□□□□□ -0.87
CHMP3-208ENST00000486404 OR10J1P30954 320 aa9.6□□□□□ -0.87
CHMP3-208ENST00000486404 PPP1R1AQ13522 171 aa9.6□□□□□ -0.87
CHMP3-208ENST00000486404 CASC10Q5T4H9 136 aa9.6□□□□□ -0.87
CHMP3-208ENST00000486404 ZFAND6Q6FIF0 208 aa9.6□□□□□ -0.87
CHMP3-208ENST00000486404 GBGT1Q8N5D6 347 aa9.6□□□□□ -0.87
CHMP3-208ENST00000486404 GRAMD2BQ96HH9 432 aa9.6□□□□□ -0.87
CHMP3-208ENST00000486404 ZNF414Q96IQ9 312 aa9.6□□□□□ -0.87
CHMP3-208ENST00000486404 EDA2RQ9HAV5 297 aa9.6□□□□□ -0.87
CHMP3-208ENST00000486404 U3KQ87 197 aa9.6□□□□□ -0.87
CHMP3-208ENST00000486404 NBEAL2Q6ZNJ1 2754 aa9.6□□□□□ -0.87
CHMP3-208ENST00000486404 LINC00854A0A1B0GVQ3 168 aa9.59□□□□□ -0.87
CHMP3-208ENST00000486404 SFT2D2O95562 160 aa9.59□□□□□ -0.87
CHMP3-208ENST00000486404 IFNA4P05014 189 aa9.59□□□□□ -0.87
CHMP3-208ENST00000486404 CMC4P56277 68 aaPredicted RBP9.59□□□□□ -0.87
CHMP3-208ENST00000486404 MLANAQ16655 118 aa9.59□□□□□ -0.87
CHMP3-208ENST00000486404 PRSS54Q6PEW0 395 aa9.59□□□□□ -0.87
CHMP3-208ENST00000486404 SLC35E1Q96K37 410 aa9.59□□□□□ -0.87
CHMP3-208ENST00000486404 VSIRQ9H7M9 311 aa9.59□□□□□ -0.87
CHMP3-208ENST00000486404 NDUFA13Q9P0J0 144 aa9.59□□□□□ -0.87
CHMP3-208ENST00000486404 RABAC1Q9UI14 185 aa9.59□□□□□ -0.87
CHMP3-208ENST00000486404 PAIP2BQ9ULR5 123 aaKnown RBP9.59□□□□□ -0.87
CHMP3-208ENST00000486404 TMED3Q9Y3Q3 217 aa9.59□□□□□ -0.87
CHMP3-208ENST00000486404 MED6O75586 246 aa9.58□□□□□ -0.88
CHMP3-208ENST00000486404 IGKV1-17P01599 117 aa9.58□□□□□ -0.88
CHMP3-208ENST00000486404 IGLC1P0CG04 106 aa9.58□□□□□ -0.88
CHMP3-208ENST00000486404 RPL35AP18077 110 aaKnown RBP9.58□□□□□ -0.88
CHMP3-208ENST00000486404 EIF2B2P49770 351 aaKnown RBP9.58□□□□□ -0.88
CHMP3-208ENST00000486404 UBE2MP61081 183 aaKnown RBP9.58□□□□□ -0.88
CHMP3-208ENST00000486404 WFDC3Q8IUB2 231 aa9.58□□□□□ -0.88
CHMP3-208ENST00000486404 STPG3Q8N7X2 389 aa9.58□□□□□ -0.88
CHMP3-208ENST00000486404 LRTM2Q8N967 370 aa9.58□□□□□ -0.88
CHMP3-208ENST00000486404 STXBP6Q8NFX7 210 aa9.58□□□□□ -0.88
CHMP3-208ENST00000486404 IL17DQ8TAD2 202 aa9.58□□□□□ -0.88
CHMP3-208ENST00000486404 Q8WTZ3 238 aa9.58□□□□□ -0.88
CHMP3-208ENST00000486404 DFFBO76075 338 aa9.57□□□□□ -0.88
CHMP3-208ENST00000486404 NDUFB6O95139 128 aa9.57□□□□□ -0.88
CHMP3-208ENST00000486404 APOHP02749 345 aaPredicted RBP9.57□□□□□ -0.88
CHMP3-208ENST00000486404 IL4P05112 153 aa9.57□□□□□ -0.88
CHMP3-208ENST00000486404 HNRNPCP07910 306 aaKnown RBP eCLIP9.57□□□□□ -0.88
CHMP3-208ENST00000486404 HOXB5P09067 269 aa9.57□□□□□ -0.88
CHMP3-208ENST00000486404 IAPPP10997 89 aa9.57□□□□□ -0.88
CHMP3-208ENST00000486404 P2RY1P47900 373 aa9.57□□□□□ -0.88
CHMP3-208ENST00000486404 ATP5IP56385 69 aaPredicted RBP9.57□□□□□ -0.88
CHMP3-208ENST00000486404 RAB11AP62491 216 aa9.57□□□□□ -0.88
CHMP3-208ENST00000486404 BAK1Q16611 211 aa9.57□□□□□ -0.88
CHMP3-208ENST00000486404 DEFB135Q30KP9 77 aa9.57□□□□□ -0.88
CHMP3-208ENST00000486404 APRG1Q8IVJ8 170 aa9.57□□□□□ -0.88
CHMP3-208ENST00000486404 COQ8AQ8NI60 647 aa9.57□□□□□ -0.88
CHMP3-208ENST00000486404 TMEM170AQ8WVE7 144 aa9.57□□□□□ -0.88
CHMP3-208ENST00000486404 NPIPB3Q92617 1050 aa9.57□□□□□ -0.88
CHMP3-208ENST00000486404 CIB3Q96Q77 187 aaPredicted RBP9.57□□□□□ -0.88
CHMP3-208ENST00000486404 C7orf50Q9BRJ6 194 aaKnown RBP9.57□□□□□ -0.88
CHMP3-208ENST00000486404 MS4A6AQ9H2W1 248 aa9.57□□□□□ -0.88
CHMP3-208ENST00000486404 MAP6D1Q9H9H5 199 aa9.57□□□□□ -0.88
CHMP3-208ENST00000486404 DNAH7Q8WXX0 4024 aa9.56□□□□□ -0.88
CHMP3-208ENST00000486404 TRAV2A0A0B4J234 112 aa9.56□□□□□ -0.88
CHMP3-208ENST00000486404 KIR2DL5BA0A0G2JN68 375 aa9.56□□□□□ -0.88
CHMP3-208ENST00000486404 KIR2DL5BA0A0G2JPC4 375 aa9.56□□□□□ -0.88
CHMP3-208ENST00000486404 FAM90A26D6RGX4 464 aa9.56□□□□□ -0.88
CHMP3-208ENST00000486404 UBE2CO00762 179 aa9.56□□□□□ -0.88
CHMP3-208ENST00000486404 SLC25A6P12236 298 aa9.56□□□□□ -0.88
CHMP3-208ENST00000486404 IL7P13232 177 aa9.56□□□□□ -0.88
CHMP3-208ENST00000486404 CRYBB3P26998 211 aa9.56□□□□□ -0.88
CHMP3-208ENST00000486404 YPEL3P61236 119 aaPredicted RBP9.56□□□□□ -0.88
CHMP3-208ENST00000486404 RPP30P78346 268 aaKnown RBP9.56□□□□□ -0.88
CHMP3-208ENST00000486404 C4orf46Q504U0 113 aa9.56□□□□□ -0.88
CHMP3-208ENST00000486404 FAM90A2PQ658T7 463 aa9.56□□□□□ -0.88
CHMP3-208ENST00000486404 KIR2DL5AQ8N109 375 aa9.56□□□□□ -0.88
CHMP3-208ENST00000486404 KIR2DL5BQ8NHK3 375 aa9.56□□□□□ -0.88
CHMP3-208ENST00000486404 KMT2CQ8NEZ4 4911 aaKnown RBP9.56□□□□□ -0.88
CHMP3-208ENST00000486404 HELTA6NFD8 242 aa9.55□□□□□ -0.88
CHMP3-208ENST00000486404 ZFP92A6NM28 416 aa9.55□□□□□ -0.88
CHMP3-208ENST00000486404 WRBO00258 174 aa9.55□□□□□ -0.88
CHMP3-208ENST00000486404 TOMM40O96008 361 aa9.55□□□□□ -0.88
CHMP3-208ENST00000486404 FABP1P07148 127 aa9.55□□□□□ -0.88
CHMP3-208ENST00000486404 RD3LP0DJH9 198 aa9.55□□□□□ -0.88
CHMP3-208ENST00000486404 NUP62P37198 522 aaPredicted RBP9.55□□□□□ -0.88
CHMP3-208ENST00000486404 Q6ZWC4 215 aa9.55□□□□□ -0.88
CHMP3-208ENST00000486404 MAGT1Q9H0U3 335 aa9.55□□□□□ -0.88
CHMP3-208ENST00000486404 TP53TG1Q9Y2A0 90 aa9.55□□□□□ -0.88
CHMP3-208ENST00000486404 C9orf170A2RU37 121 aa9.54□□□□□ -0.88
CHMP3-208ENST00000486404 SPRY2O43597 315 aa9.54□□□□□ -0.88
CHMP3-208ENST00000486404 SYNGR2O43760 224 aa9.54□□□□□ -0.88
CHMP3-208ENST00000486404 PITX3O75364 302 aa9.54□□□□□ -0.88
CHMP3-208ENST00000486404 IFNA21P01568 189 aa9.54□□□□□ -0.88
CHMP3-208ENST00000486404 ZNF124Q15973 351 aa9.54□□□□□ -0.88
CHMP3-208ENST00000486404 LINC01559Q495D7 138 aa9.54□□□□□ -0.88
CHMP3-208ENST00000486404 GGNBP1Q5YKI7 109 aa9.54□□□□□ -0.88
CHMP3-208ENST00000486404 LILRB2Q8N423 598 aa9.54□□□□□ -0.88
CHMP3-208ENST00000486404 OVOL2Q9BRP0 275 aa9.54□□□□□ -0.88
CHMP3-208ENST00000486404 PBDC1Q9BVG4 233 aa9.54□□□□□ -0.88
CHMP3-208ENST00000486404 PFDN2Q9UHV9 154 aa9.54□□□□□ -0.88
CHMP3-208ENST00000486404 FLVCR2Q9UPI3 526 aa9.54□□□□□ -0.88
CHMP3-208ENST00000486404 OR4E1P0C645 316 aa9.53□□□□□ -0.88
CHMP3-208ENST00000486404 ANXA7P20073 488 aaKnown RBP9.53□□□□□ -0.88
CHMP3-208ENST00000486404 GPX4P36969 197 aaPredicted RBP9.53□□□□□ -0.88
CHMP3-208ENST00000486404 DEFB131AP59861 70 aa9.53□□□□□ -0.88
CHMP3-208ENST00000486404 DHRS2Q13268 280 aa9.53□□□□□ -0.88
CHMP3-208ENST00000486404 USF2Q15853 346 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms