RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 HOXB5P09067 269 aa13.1□□□□□ -0.31
COL6A1-204ENST00000486023 OR10J1P30954 320 aa13.1□□□□□ -0.31
COL6A1-204ENST00000486023 APOC4P55056 127 aa13.1□□□□□ -0.31
COL6A1-204ENST00000486023 BAK1Q16611 211 aa13.1□□□□□ -0.31
COL6A1-204ENST00000486023 ETFRF1Q6IPR1 90 aa13.1□□□□□ -0.31
COL6A1-204ENST00000486023 NOXA1Q86UR1 476 aa13.1□□□□□ -0.31
COL6A1-204ENST00000486023 Q8WTZ3 238 aa13.1□□□□□ -0.31
COL6A1-204ENST00000486023 NPIPB3Q92617 1050 aa13.1□□□□□ -0.31
COL6A1-204ENST00000486023 MS4A6AQ9H2W1 248 aa13.1□□□□□ -0.31
COL6A1-204ENST00000486023 HSPB7Q9UBY9 170 aa13.1□□□□□ -0.31
COL6A1-204ENST00000486023 CACFD1Q9UGQ2 172 aa13.1□□□□□ -0.31
COL6A1-204ENST00000486023 IGKV1-17P01599 117 aa13.09□□□□□ -0.31
COL6A1-204ENST00000486023 IAPPP10997 89 aa13.09□□□□□ -0.31
COL6A1-204ENST00000486023 SLC25A4P12235 298 aa13.09□□□□□ -0.31
COL6A1-204ENST00000486023 PPP1R1AQ13522 171 aa13.09□□□□□ -0.31
COL6A1-204ENST00000486023 RBMS2Q15434 407 aaKnown RBP13.09□□□□□ -0.31
COL6A1-204ENST00000486023 DEFB135Q30KP9 77 aa13.09□□□□□ -0.31
COL6A1-204ENST00000486023 FAM90A2PQ658T7 463 aa13.09□□□□□ -0.31
COL6A1-204ENST00000486023 CENPSQ8N2Z9 138 aa13.09□□□□□ -0.31
COL6A1-204ENST00000486023 STPG3Q8N7X2 389 aa13.09□□□□□ -0.31
COL6A1-204ENST00000486023 NARS2Q96I59 477 aaKnown RBP13.09□□□□□ -0.31
COL6A1-204ENST00000486023 OVOL2Q9BRP0 275 aa13.09□□□□□ -0.31
COL6A1-204ENST00000486023 TMEM231Q9H6L2 316 aa13.09□□□□□ -0.31
COL6A1-204ENST00000486023 VSIRQ9H7M9 311 aa13.09□□□□□ -0.31
COL6A1-204ENST00000486023 U3KQ87 197 aa13.09□□□□□ -0.31
COL6A1-204ENST00000486023 A0A1W2PS18 150 aa13.08□□□□□ -0.32
COL6A1-204ENST00000486023 SFT2D2O95562 160 aa13.08□□□□□ -0.32
COL6A1-204ENST00000486023 IGLC1P0CG04 106 aa13.08□□□□□ -0.32
COL6A1-204ENST00000486023 CMC4P56277 68 aaPredicted RBP13.08□□□□□ -0.32
COL6A1-204ENST00000486023 LEMD1Q68G75 181 aa13.08□□□□□ -0.32
COL6A1-204ENST00000486023 STXBP6Q8NFX7 210 aa13.08□□□□□ -0.32
COL6A1-204ENST00000486023 OR1S2Q8NGQ3 325 aa13.08□□□□□ -0.32
COL6A1-204ENST00000486023 MAGT1Q9H0U3 335 aa13.08□□□□□ -0.32
COL6A1-204ENST00000486023 SPRY2O43597 315 aa13.07□□□□□ -0.32
COL6A1-204ENST00000486023 MAP6D1Q9H9H5 199 aa13.07□□□□□ -0.32
COL6A1-204ENST00000486023 FLVCR2Q9UPI3 526 aa13.07□□□□□ -0.32
COL6A1-204ENST00000486023 PIGBOS1A0A0B4J2F0 54 aa13.06□□□□□ -0.32
COL6A1-204ENST00000486023 IL4P05112 153 aa13.06□□□□□ -0.32
COL6A1-204ENST00000486023 CD5P06127 495 aa13.06□□□□□ -0.32
COL6A1-204ENST00000486023 RD3LP0DJH9 198 aa13.06□□□□□ -0.32
COL6A1-204ENST00000486023 P2RY1P47900 373 aa13.06□□□□□ -0.32
COL6A1-204ENST00000486023 DEFB131AP59861 70 aa13.06□□□□□ -0.32
COL6A1-204ENST00000486023 FAM24BQ8N5W8 94 aa13.06□□□□□ -0.32
COL6A1-204ENST00000486023 DEDD2Q8WXF8 326 aa13.06□□□□□ -0.32
COL6A1-204ENST00000486023 GRAMD2BQ96HH9 432 aa13.06□□□□□ -0.32
COL6A1-204ENST00000486023 DYNC2H1Q8NCM8 4307 aaKnown RBP13.05□□□□□ -0.32
COL6A1-204ENST00000486023 DUXBA0A1W2PPF3 345 aa13.05□□□□□ -0.32
COL6A1-204ENST00000486023 CENPXA8MT69 81 aa13.05□□□□□ -0.32
COL6A1-204ENST00000486023 WRBO00258 174 aa13.05□□□□□ -0.32
COL6A1-204ENST00000486023 CRYBB3P26998 211 aa13.05□□□□□ -0.32
COL6A1-204ENST00000486023 TMED3Q9Y3Q3 217 aa13.05□□□□□ -0.32
COL6A1-204ENST00000486023 NAP1L6A6NFF2 107 aa13.04□□□□□ -0.32
COL6A1-204ENST00000486023 ZFP92A6NM28 416 aa13.04□□□□□ -0.32
COL6A1-204ENST00000486023 HNRNPCP07910 306 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL6A1-204ENST00000486023 YPEL3P61236 119 aaPredicted RBP13.04□□□□□ -0.32
COL6A1-204ENST00000486023 RAB11AP62491 216 aa13.04□□□□□ -0.32
COL6A1-204ENST00000486023 GGNBP1Q5YKI7 109 aa13.04□□□□□ -0.32
COL6A1-204ENST00000486023 Q6ZWC4 215 aa13.04□□□□□ -0.32
COL6A1-204ENST00000486023 PBDC1Q9BVG4 233 aa13.04□□□□□ -0.32
COL6A1-204ENST00000486023 CSTL1Q9H114 145 aa13.04□□□□□ -0.32
COL6A1-204ENST00000486023 A0A0J9YWU9 116 aa13.03□□□□□ -0.32
COL6A1-204ENST00000486023 C9orf170A2RU37 121 aa13.03□□□□□ -0.32
COL6A1-204ENST00000486023 UBE2CO00762 179 aa13.03□□□□□ -0.32
COL6A1-204ENST00000486023 PITX3O75364 302 aa13.03□□□□□ -0.32
COL6A1-204ENST00000486023 MED6O75586 246 aa13.03□□□□□ -0.32
COL6A1-204ENST00000486023 ADAP1O75689 374 aa13.03□□□□□ -0.32
COL6A1-204ENST00000486023 PSG1P11464 419 aa13.03□□□□□ -0.32
COL6A1-204ENST00000486023 USF2Q15853 346 aaPredicted RBP13.03□□□□□ -0.32
COL6A1-204ENST00000486023 LRTM2Q8N967 370 aa13.03□□□□□ -0.32
COL6A1-204ENST00000486023 OR51G1Q8NGK1 321 aa13.03□□□□□ -0.32
COL6A1-204ENST00000486023 IL17DQ8TAD2 202 aa13.03□□□□□ -0.32
COL6A1-204ENST00000486023 SLC35E1Q96K37 410 aa13.03□□□□□ -0.32
COL6A1-204ENST00000486023 SDHCQ99643 169 aaPredicted RBP13.03□□□□□ -0.32
COL6A1-204ENST00000486023 TENM2Q9NT68 2774 aa13.03□□□□□ -0.32
COL6A1-204ENST00000486023 KIR2DL5BA0A0G2JN68 375 aa13.02□□□□□ -0.33
COL6A1-204ENST00000486023 KIR2DL5BA0A0G2JPC4 375 aa13.02□□□□□ -0.33
COL6A1-204ENST00000486023 MPTX1A8MV57 137 aa13.02□□□□□ -0.33
COL6A1-204ENST00000486023 NDUFB6O95139 128 aa13.02□□□□□ -0.33
COL6A1-204ENST00000486023 ANXA7P20073 488 aaKnown RBP13.02□□□□□ -0.33
COL6A1-204ENST00000486023 EIF2B2P49770 351 aaKnown RBP13.02□□□□□ -0.33
COL6A1-204ENST00000486023 DHRS2Q13268 280 aa13.02□□□□□ -0.33
COL6A1-204ENST00000486023 PMS2P11Q13670 270 aa13.02□□□□□ -0.33
COL6A1-204ENST00000486023 GAMTQ14353 236 aa13.02□□□□□ -0.33
COL6A1-204ENST00000486023 C4orf46Q504U0 113 aa13.02□□□□□ -0.33
COL6A1-204ENST00000486023 KIR2DL5AQ8N109 375 aa13.02□□□□□ -0.33
COL6A1-204ENST00000486023 KIR2DL5BQ8NHK3 375 aa13.02□□□□□ -0.33
COL6A1-204ENST00000486023 NDUFA13Q9P0J0 144 aa13.02□□□□□ -0.33
COL6A1-204ENST00000486023 SYNGR2O43760 224 aa13.01□□□□□ -0.33
COL6A1-204ENST00000486023 TOMM40O96008 361 aa13.01□□□□□ -0.33
COL6A1-204ENST00000486023 OR4E1P0C645 316 aa13.01□□□□□ -0.33
COL6A1-204ENST00000486023 ZNF688P0C7X2 276 aa13.01□□□□□ -0.33
COL6A1-204ENST00000486023 IL7P13232 177 aa13.01□□□□□ -0.33
COL6A1-204ENST00000486023 GPX4P36969 197 aaPredicted RBP13.01□□□□□ -0.33
COL6A1-204ENST00000486023 ZNF90Q03938 601 aa13.01□□□□□ -0.33
COL6A1-204ENST00000486023 OR2F1Q13607 317 aa13.01□□□□□ -0.33
COL6A1-204ENST00000486023 SPANXN5Q5MJ07 72 aa13.01□□□□□ -0.33
COL6A1-204ENST00000486023 LYG2Q86SG7 212 aa13.01□□□□□ -0.33
COL6A1-204ENST00000486023 STHQ8IWL8 128 aa13.01□□□□□ -0.33
COL6A1-204ENST00000486023 COQ8AQ8NI60 647 aa13.01□□□□□ -0.33
COL6A1-204ENST00000486023 RNF183Q96D59 192 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms