RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 YPEL3P61236 119 aaPredicted RBP12.16□□□□□ -0.46
APOE-205ENST00000485628 KLHL30-AS1Q8NEE0 82 aa12.16□□□□□ -0.46
APOE-205ENST00000485628 RAX2Q96IS3 184 aa12.16□□□□□ -0.46
APOE-205ENST00000485628 TRGV9Q99603 122 aa12.16□□□□□ -0.46
APOE-205ENST00000485628 ATP5SQ99766 215 aa12.16□□□□□ -0.46
APOE-205ENST00000485628 UQCC1Q9NVA1 299 aa12.16□□□□□ -0.46
APOE-205ENST00000485628 FBXL17Q9UF56 701 aa12.16□□□□□ -0.46
APOE-205ENST00000485628 IGHV4OR15-8A0A075B7B6 117 aa12.15□□□□□ -0.46
APOE-205ENST00000485628 A0A087WW49 117 aa12.15□□□□□ -0.46
APOE-205ENST00000485628 PPP5D1E7EU14 171 aa12.15□□□□□ -0.46
APOE-205ENST00000485628 PFDN1O60925 122 aa12.15□□□□□ -0.46
APOE-205ENST00000485628 OR10J1P30954 320 aa12.15□□□□□ -0.46
APOE-205ENST00000485628 GPR183P32249 361 aa12.15□□□□□ -0.46
APOE-205ENST00000485628 NUP62P37198 522 aaPredicted RBP12.15□□□□□ -0.46
APOE-205ENST00000485628 EIF2B2P49770 351 aaKnown RBP12.15□□□□□ -0.46
APOE-205ENST00000485628 ZFP69Q49AA0 526 aa12.15□□□□□ -0.46
APOE-205ENST00000485628 SHISA2Q6UWI4 295 aa12.15□□□□□ -0.46
APOE-205ENST00000485628 C12orf54Q6X4T0 127 aa12.15□□□□□ -0.46
APOE-205ENST00000485628 C8orf86Q6ZUL3 223 aa12.15□□□□□ -0.46
APOE-205ENST00000485628 C9orf62Q8N4C0 152 aa12.15□□□□□ -0.46
APOE-205ENST00000485628 ACY3Q96HD9 319 aa12.15□□□□□ -0.46
APOE-205ENST00000485628 OR5B12Q96R08 314 aa12.15□□□□□ -0.46
APOE-205ENST00000485628 ANKRD34BA5PLL1 514 aa12.14□□□□□ -0.47
APOE-205ENST00000485628 TAAR5O14804 337 aa12.14□□□□□ -0.47
APOE-205ENST00000485628 GNG7O60262 68 aa12.14□□□□□ -0.47
APOE-205ENST00000485628 GGCTO75223 188 aaKnown RBP12.14□□□□□ -0.47
APOE-205ENST00000485628 DFFBO76075 338 aa12.14□□□□□ -0.47
APOE-205ENST00000485628 KLF5Q13887 457 aaPredicted RBP12.14□□□□□ -0.47
APOE-205ENST00000485628 CLINT1Q14677 625 aa12.14□□□□□ -0.47
APOE-205ENST00000485628 Q56UQ5 140 aa12.14□□□□□ -0.47
APOE-205ENST00000485628 TEPPQ6URK8 271 aa12.14□□□□□ -0.47
APOE-205ENST00000485628 TMEM182Q6ZP80 229 aaPredicted RBP12.14□□□□□ -0.47
APOE-205ENST00000485628 GPHB5Q86YW7 130 aa12.14□□□□□ -0.47
APOE-205ENST00000485628 LILRB2Q8N423 598 aa12.14□□□□□ -0.47
APOE-205ENST00000485628 MGST2Q99735 147 aa12.14□□□□□ -0.47
APOE-205ENST00000485628 WDR61Q9GZS3 305 aaKnown RBP12.14□□□□□ -0.47
APOE-205ENST00000485628 ARV1Q9H2C2 271 aa12.14□□□□□ -0.47
APOE-205ENST00000485628 VWFP04275 2813 aa12.13□□□□□ -0.47
APOE-205ENST00000485628 ANK2Q01484 3957 aa12.13□□□□□ -0.47
APOE-205ENST00000485628 CCL24O00175 119 aa12.13□□□□□ -0.47
APOE-205ENST00000485628 MPDU1O75352 247 aa12.13□□□□□ -0.47
APOE-205ENST00000485628 ARL3P36405 182 aa12.13□□□□□ -0.47
APOE-205ENST00000485628 ZNF90Q03938 601 aa12.13□□□□□ -0.47
APOE-205ENST00000485628 DEFB136Q30KP8 78 aa12.13□□□□□ -0.47
APOE-205ENST00000485628 TIGITQ495A1 244 aa12.13□□□□□ -0.47
APOE-205ENST00000485628 TMUB2Q71RG4 321 aa12.13□□□□□ -0.47
APOE-205ENST00000485628 C3orf56Q8N813 242 aa12.13□□□□□ -0.47
APOE-205ENST00000485628 OR11H1Q8NG94 326 aa12.13□□□□□ -0.47
APOE-205ENST00000485628 OR1N2Q8NGR9 330 aa12.13□□□□□ -0.47
APOE-205ENST00000485628 SMIM3Q9BZL3 60 aa12.13□□□□□ -0.47
APOE-205ENST00000485628 SLC45A2Q9UMX9 530 aa12.13□□□□□ -0.47
APOE-205ENST00000485628 A0A1W2PRX2 142 aa12.12□□□□□ -0.47
APOE-205ENST00000485628 LINC01619G3V211 115 aa12.12□□□□□ -0.47
APOE-205ENST00000485628 NUPL2O15504 423 aaKnown RBP12.12□□□□□ -0.47
APOE-205ENST00000485628 TOMM40O96008 361 aa12.12□□□□□ -0.47
APOE-205ENST00000485628 LINC00869P0C866 280 aa12.12□□□□□ -0.47
APOE-205ENST00000485628 MYCNOSP40205 109 aa12.12□□□□□ -0.47
APOE-205ENST00000485628 AP2S1P53680 142 aaPredicted RBP12.12□□□□□ -0.47
APOE-205ENST00000485628 PLP1P60201 277 aa12.12□□□□□ -0.47
APOE-205ENST00000485628 PRR20EP86478 221 aa12.12□□□□□ -0.47
APOE-205ENST00000485628 PRR20CP86479 221 aa12.12□□□□□ -0.47
APOE-205ENST00000485628 PRR20DP86480 221 aa12.12□□□□□ -0.47
APOE-205ENST00000485628 PRR20BP86481 221 aa12.12□□□□□ -0.47
APOE-205ENST00000485628 PRR20AP86496 221 aa12.12□□□□□ -0.47
APOE-205ENST00000485628 ZNF616Q08AN1 781 aa12.12□□□□□ -0.47
APOE-205ENST00000485628 BTNL8Q6UX41 500 aa12.12□□□□□ -0.47
APOE-205ENST00000485628 UBAC2Q8NBM4 344 aa12.12□□□□□ -0.47
APOE-205ENST00000485628 PPP1R14BQ96C90 147 aa12.12□□□□□ -0.47
APOE-205ENST00000485628 TRRAPQ9Y4A5 3859 aa12.11□□□□□ -0.47
APOE-205ENST00000485628 WNK1Q9H4A3 2382 aa12.11□□□□□ -0.47
APOE-205ENST00000485628 WI2-2373I1.2A0A1W2PRP0 233 aa12.11□□□□□ -0.47
APOE-205ENST00000485628 LGALS9O00182 355 aa12.11□□□□□ -0.47
APOE-205ENST00000485628 NDUFA4O00483 81 aa12.11□□□□□ -0.47
APOE-205ENST00000485628 AGPAT2O15120 278 aa12.11□□□□□ -0.47
APOE-205ENST00000485628 OR2C1O95371 312 aa12.11□□□□□ -0.47
APOE-205ENST00000485628 PSG1P11464 419 aa12.11□□□□□ -0.47
APOE-205ENST00000485628 HOXD3P31249 432 aaPredicted RBP12.11□□□□□ -0.47
APOE-205ENST00000485628 AKR1C1Q04828 323 aa12.11□□□□□ -0.47
APOE-205ENST00000485628 ZNF266Q14584 549 aa12.11□□□□□ -0.47
APOE-205ENST00000485628 NSUN5P1Q3KNT7 163 aa12.11□□□□□ -0.47
APOE-205ENST00000485628 KHDC1LQ5JSQ8 128 aa12.11□□□□□ -0.47
APOE-205ENST00000485628 RPL7L1Q6DKI1 246 aaKnown RBP12.11□□□□□ -0.47
APOE-205ENST00000485628 ZNF600Q6ZNG1 722 aa12.11□□□□□ -0.47
APOE-205ENST00000485628 ARPC5LQ9BPX5 153 aa12.11□□□□□ -0.47
APOE-205ENST00000485628 GGTLC1Q9BX51 225 aa12.11□□□□□ -0.47
APOE-205ENST00000485628 ZFAND3Q9H8U3 227 aa12.11□□□□□ -0.47
APOE-205ENST00000485628 ZC4H2Q9NQZ6 224 aa12.11□□□□□ -0.47
APOE-205ENST00000485628 UBE2L5PA0A1B0GUS4 154 aa12.1□□□□□ -0.47
APOE-205ENST00000485628 ZFP92A6NM28 416 aa12.1□□□□□ -0.47
APOE-205ENST00000485628 NUDT19A8MXV4 375 aa12.1□□□□□ -0.47
APOE-205ENST00000485628 BOLA2-SMG1P6H3BVE0 249 aa12.1□□□□□ -0.47
APOE-205ENST00000485628 BCL2L11O43521 198 aa12.1□□□□□ -0.47
APOE-205ENST00000485628 ZP3P21754 424 aa12.1□□□□□ -0.47
APOE-205ENST00000485628 RPL29P47914 159 aaKnown RBP12.1□□□□□ -0.47
APOE-205ENST00000485628 NKX2-5P52952 324 aaPredicted RBP12.1□□□□□ -0.47
APOE-205ENST00000485628 RELQ04864 619 aaPredicted RBP12.1□□□□□ -0.47
APOE-205ENST00000485628 OPCMLQ14982 345 aa12.1□□□□□ -0.47
APOE-205ENST00000485628 CYP2G1PQ6ZSU1 146 aa12.1□□□□□ -0.47
APOE-205ENST00000485628 REC114Q7Z4M0 266 aa12.1□□□□□ -0.47
APOE-205ENST00000485628 DUX3Q96PT4 197 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms