RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 SPANXN2Q5MJ10 180 aa9.96□□□□□ -0.82
SMARCD3-211ENST00000485592 GRAMD2BQ96HH9 432 aa9.96□□□□□ -0.82
SMARCD3-211ENST00000485592 NARS2Q96I59 477 aaKnown RBP9.96□□□□□ -0.82
SMARCD3-211ENST00000485592 METTL26Q96S19 204 aa9.96□□□□□ -0.82
SMARCD3-211ENST00000485592 TP53RKQ96S44 253 aa9.96□□□□□ -0.82
SMARCD3-211ENST00000485592 RTBDNQ9BSG5 229 aaPredicted RBP9.96□□□□□ -0.82
SMARCD3-211ENST00000485592 DISC1C4P0D8 188 aa9.95□□□□□ -0.82
SMARCD3-211ENST00000485592 K7EQG2 157 aa9.95□□□□□ -0.82
SMARCD3-211ENST00000485592 CORTO00230 105 aa9.95□□□□□ -0.82
SMARCD3-211ENST00000485592 AMBPP02760 352 aa9.95□□□□□ -0.82
SMARCD3-211ENST00000485592 PGAM2P15259 253 aa9.95□□□□□ -0.82
SMARCD3-211ENST00000485592 C4BPBP20851 252 aa9.95□□□□□ -0.82
SMARCD3-211ENST00000485592 SURF2Q15527 256 aaPredicted RBP9.95□□□□□ -0.82
SMARCD3-211ENST00000485592 SLC35G3Q8N808 338 aa9.95□□□□□ -0.82
SMARCD3-211ENST00000485592 TMEM230Q96A57 120 aa9.95□□□□□ -0.82
SMARCD3-211ENST00000485592 PRRT1Q99946 306 aa9.95□□□□□ -0.82
SMARCD3-211ENST00000485592 TBC1D24Q9ULP9 559 aa9.95□□□□□ -0.82
SMARCD3-211ENST00000485592 X6R8D5 127 aa9.95□□□□□ -0.82
SMARCD3-211ENST00000485592 ELOA3CA0A087WX78 387 aaPredicted RBP9.94□□□□□ -0.82
SMARCD3-211ENST00000485592 A0A1B0GU03 582 aa9.94□□□□□ -0.82
SMARCD3-211ENST00000485592 A0A1B0GVY2 172 aa9.94□□□□□ -0.82
SMARCD3-211ENST00000485592 PRSS29PA6NIE9 313 aa9.94□□□□□ -0.82
SMARCD3-211ENST00000485592 KNCNA6PVL3 124 aa9.94□□□□□ -0.82
SMARCD3-211ENST00000485592 TMEM50AO95807 157 aa9.94□□□□□ -0.82
SMARCD3-211ENST00000485592 GIG44P09565 113 aaPredicted RBP9.94□□□□□ -0.82
SMARCD3-211ENST00000485592 ZNF688P0C7X2 276 aa9.94□□□□□ -0.82
SMARCD3-211ENST00000485592 P0C879 139 aa9.94□□□□□ -0.82
SMARCD3-211ENST00000485592 P0DMU3 169 aa9.94□□□□□ -0.82
SMARCD3-211ENST00000485592 FAM231AP0DMU4 169 aa9.94□□□□□ -0.82
SMARCD3-211ENST00000485592 FAM231CP0DMU5 169 aa9.94□□□□□ -0.82
SMARCD3-211ENST00000485592 P2RY1P47900 373 aa9.94□□□□□ -0.82
SMARCD3-211ENST00000485592 EIF2B2P49770 351 aaKnown RBP9.94□□□□□ -0.82
SMARCD3-211ENST00000485592 SUB1P53999 127 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMARCD3-211ENST00000485592 SPINK9Q5DT21 86 aa9.94□□□□□ -0.82
SMARCD3-211ENST00000485592 PDCD10Q9BUL8 212 aa9.94□□□□□ -0.82
SMARCD3-211ENST00000485592 GPR132Q9UNW8 380 aa9.94□□□□□ -0.82
SMARCD3-211ENST00000485592 DEFB131BA0A096LNP1 70 aa9.93□□□□□ -0.82
SMARCD3-211ENST00000485592 IGKV1-5P01602 117 aa9.93□□□□□ -0.82
SMARCD3-211ENST00000485592 ACTL10Q5JWF8 245 aa9.93□□□□□ -0.82
SMARCD3-211ENST00000485592 TOMM5Q8N4H5 51 aa9.93□□□□□ -0.82
SMARCD3-211ENST00000485592 POM121L12Q8N7R1 296 aa9.93□□□□□ -0.82
SMARCD3-211ENST00000485592 ZFAND1Q8TCF1 268 aa9.93□□□□□ -0.82
SMARCD3-211ENST00000485592 NDUFAF3Q9BU61 184 aa9.93□□□□□ -0.82
SMARCD3-211ENST00000485592 MCUBQ9NWR8 336 aa9.93□□□□□ -0.82
SMARCD3-211ENST00000485592 CLEC5AQ9NY25 188 aa9.93□□□□□ -0.82
SMARCD3-211ENST00000485592 AGRNO00468 2067 aa9.93□□□□□ -0.82
SMARCD3-211ENST00000485592 C3orf85A0A1B0GTC6 90 aa9.92□□□□□ -0.82
SMARCD3-211ENST00000485592 IFNA17P01571 189 aa9.92□□□□□ -0.82
SMARCD3-211ENST00000485592 UCP1P25874 307 aa9.92□□□□□ -0.82
SMARCD3-211ENST00000485592 CRYBB3P26998 211 aa9.92□□□□□ -0.82
SMARCD3-211ENST00000485592 OPRK1P41145 380 aa9.92□□□□□ -0.82
SMARCD3-211ENST00000485592 HOXA1P49639 335 aaPredicted RBP9.92□□□□□ -0.82
SMARCD3-211ENST00000485592 SP6Q3SY56 376 aa9.92□□□□□ -0.82
SMARCD3-211ENST00000485592 LHFPL5Q8TAF8 219 aa9.92□□□□□ -0.82
SMARCD3-211ENST00000485592 DCANP1Q8TF63 244 aa9.92□□□□□ -0.82
SMARCD3-211ENST00000485592 DEDD2Q8WXF8 326 aa9.92□□□□□ -0.82
SMARCD3-211ENST00000485592 COPZ2Q9P299 210 aa9.92□□□□□ -0.82
SMARCD3-211ENST00000485592 CELA1Q9UNI1 258 aa9.92□□□□□ -0.82
SMARCD3-211ENST00000485592 A0A0G2JRQ6 117 aa9.91□□□□□ -0.82
SMARCD3-211ENST00000485592 CRYM-AS1A6NIL9 109 aa9.91□□□□□ -0.82
SMARCD3-211ENST00000485592 INS-IGF2F8WCM5 200 aa9.91□□□□□ -0.82
SMARCD3-211ENST00000485592 CLN5O75503 358 aa9.91□□□□□ -0.82
SMARCD3-211ENST00000485592 OR5AC1P0C628 307 aa9.91□□□□□ -0.82
SMARCD3-211ENST00000485592 IL7P13232 177 aa9.91□□□□□ -0.82
SMARCD3-211ENST00000485592 NPY1RP25929 384 aa9.91□□□□□ -0.82
SMARCD3-211ENST00000485592 BTCP35070 178 aa9.91□□□□□ -0.82
SMARCD3-211ENST00000485592 AKR1C2P52895 323 aa9.91□□□□□ -0.82
SMARCD3-211ENST00000485592 AP3S2P59780 193 aa9.91□□□□□ -0.82
SMARCD3-211ENST00000485592 NUTF2P61970 127 aaKnown RBP9.91□□□□□ -0.82
SMARCD3-211ENST00000485592 SUPT4H1P63272 117 aaKnown RBP9.91□□□□□ -0.82
SMARCD3-211ENST00000485592 IZUMO4Q1ZYL8 232 aa9.91□□□□□ -0.82
SMARCD3-211ENST00000485592 C12orf74Q32Q52 190 aa9.91□□□□□ -0.82
SMARCD3-211ENST00000485592 CCDC71LQ8N9Z2 235 aa9.91□□□□□ -0.82
SMARCD3-211ENST00000485592 C1QTNF4Q9BXJ3 329 aa9.91□□□□□ -0.82
SMARCD3-211ENST00000485592 TMEM222Q9H0R3 208 aa9.91□□□□□ -0.82
SMARCD3-211ENST00000485592 NAA60Q9H7X0 242 aa9.91□□□□□ -0.82
SMARCD3-211ENST00000485592 ENY2Q9NPA8 101 aa9.91□□□□□ -0.82
SMARCD3-211ENST00000485592 PTTG2Q9NZH5 202 aa9.91□□□□□ -0.82
SMARCD3-211ENST00000485592 SCP2D1Q9UJQ7 156 aa9.91□□□□□ -0.82
SMARCD3-211ENST00000485592 HELTA6NFD8 242 aa9.9□□□□□ -0.82
SMARCD3-211ENST00000485592 M0R2N4 97 aa9.9□□□□□ -0.82
SMARCD3-211ENST00000485592 ATG12O94817 140 aa9.9□□□□□ -0.82
SMARCD3-211ENST00000485592 RNASE2P10153 161 aaKnown RBP9.9□□□□□ -0.82
SMARCD3-211ENST00000485592 DHRS2Q13268 280 aa9.9□□□□□ -0.82
SMARCD3-211ENST00000485592 PSMG4Q5JS54 123 aa9.9□□□□□ -0.82
SMARCD3-211ENST00000485592 LINC00299Q6ZSB3 139 aa9.9□□□□□ -0.82
SMARCD3-211ENST00000485592 ZNF767PQ75MW2 155 aa9.9□□□□□ -0.82
SMARCD3-211ENST00000485592 CSNK1G2-AS1Q8NCQ2 148 aa9.9□□□□□ -0.82
SMARCD3-211ENST00000485592 OR4X1Q8NH49 305 aa9.9□□□□□ -0.82
SMARCD3-211ENST00000485592 GLYATL2Q8WU03 294 aa9.9□□□□□ -0.82
SMARCD3-211ENST00000485592 PRR13Q9NZ81 148 aa9.9□□□□□ -0.82
SMARCD3-211ENST00000485592 C14orf166Q9Y224 244 aaKnown RBP9.9□□□□□ -0.82
SMARCD3-211ENST00000485592 TRAV30A0A087WSZ9 112 aa9.89□□□□□ -0.83
SMARCD3-211ENST00000485592 RTL8CO15255 209 aa9.89□□□□□ -0.83
SMARCD3-211ENST00000485592 CDS2O95674 445 aa9.89□□□□□ -0.83
SMARCD3-211ENST00000485592 FAUP35544 74 aaKnown RBP9.89□□□□□ -0.83
SMARCD3-211ENST00000485592 AP2S1P53680 142 aaPredicted RBP9.89□□□□□ -0.83
SMARCD3-211ENST00000485592 TRIQKQ629K1 86 aa9.89□□□□□ -0.83
SMARCD3-211ENST00000485592 RAB40CQ96S21 281 aa9.89□□□□□ -0.83
SMARCD3-211ENST00000485592 A0A0B4J293 547 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms