RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 RPS10-NUDT3A0A1W2PQS6 291 aa13.93□□□□□ -0.18
COL27A1-205ENST00000485397 ZNF705EA8MWA4 302 aaPredicted RBP13.93□□□□□ -0.18
COL27A1-205ENST00000485397 C11orf94C9JXX5 98 aa13.93□□□□□ -0.18
COL27A1-205ENST00000485397 B3GALNT1O75752 331 aa13.93□□□□□ -0.18
COL27A1-205ENST00000485397 GABARAPO95166 117 aa13.93□□□□□ -0.18
COL27A1-205ENST00000485397 MIFP14174 115 aa13.93□□□□□ -0.18
COL27A1-205ENST00000485397 HTR2BP41595 481 aa13.93□□□□□ -0.18
COL27A1-205ENST00000485397 RND2P52198 227 aa13.93□□□□□ -0.18
COL27A1-205ENST00000485397 DHRS2Q13268 280 aa13.93□□□□□ -0.18
COL27A1-205ENST00000485397 TMEM41BQ5BJD5 291 aa13.93□□□□□ -0.18
COL27A1-205ENST00000485397 FAM219AQ8IW50 185 aa13.93□□□□□ -0.18
COL27A1-205ENST00000485397 SELENOHQ8IZQ5 122 aaKnown RBP13.93□□□□□ -0.18
COL27A1-205ENST00000485397 OR1S2Q8NGQ3 325 aa13.93□□□□□ -0.18
COL27A1-205ENST00000485397 GPR146Q96CH1 333 aa13.93□□□□□ -0.18
COL27A1-205ENST00000485397 RTBDNQ9BSG5 229 aaPredicted RBP13.93□□□□□ -0.18
COL27A1-205ENST00000485397 MIXL1Q9H2W2 232 aa13.93□□□□□ -0.18
COL27A1-205ENST00000485397 HEYLQ9NQ87 328 aaPredicted RBP13.93□□□□□ -0.18
COL27A1-205ENST00000485397 CACNG5Q9UF02 275 aa13.93□□□□□ -0.18
COL27A1-205ENST00000485397 TEX13DA0A0J9YY54 714 aaPredicted RBP13.92□□□□□ -0.18
COL27A1-205ENST00000485397 HNRNPCP07910 306 aaKnown RBP eCLIP13.92□□□□□ -0.18
COL27A1-205ENST00000485397 DHODHQ02127 395 aa13.92□□□□□ -0.18
COL27A1-205ENST00000485397 C2orf83Q53S99 150 aa13.92□□□□□ -0.18
COL27A1-205ENST00000485397 PSMG4Q5JS54 123 aa13.92□□□□□ -0.18
COL27A1-205ENST00000485397 C16orf54Q6UWD8 224 aa13.92□□□□□ -0.18
COL27A1-205ENST00000485397 Q6ZTC4 211 aa13.92□□□□□ -0.18
COL27A1-205ENST00000485397 CSNK1G2-AS1Q8NCQ2 148 aa13.92□□□□□ -0.18
COL27A1-205ENST00000485397 Q8WTZ3 238 aa13.92□□□□□ -0.18
COL27A1-205ENST00000485397 TMEM170AQ8WVE7 144 aa13.92□□□□□ -0.18
COL27A1-205ENST00000485397 GLMPQ8WWB7 406 aa13.92□□□□□ -0.18
COL27A1-205ENST00000485397 RAB40CQ96S21 281 aa13.92□□□□□ -0.18
COL27A1-205ENST00000485397 NAA60Q9H7X0 242 aa13.92□□□□□ -0.18
COL27A1-205ENST00000485397 C14orf166Q9Y224 244 aaKnown RBP13.92□□□□□ -0.18
COL27A1-205ENST00000485397 HELTA6NFD8 242 aa13.91□□□□□ -0.18
COL27A1-205ENST00000485397 OR10J1P30954 320 aa13.91□□□□□ -0.18
COL27A1-205ENST00000485397 MEF2DQ14814 521 aa13.91□□□□□ -0.18
COL27A1-205ENST00000485397 C15orf40Q8WUR7 153 aa13.91□□□□□ -0.18
COL27A1-205ENST00000485397 RBPMSQ93062 196 aaKnown RBP13.91□□□□□ -0.18
COL27A1-205ENST00000485397 TBC1D24Q9ULP9 559 aa13.91□□□□□ -0.18
COL27A1-205ENST00000485397 CEBPZOSA8MTT3 80 aa13.9□□□□□ -0.18
COL27A1-205ENST00000485397 GABARAPH6UMI1 98 aa13.9□□□□□ -0.18
COL27A1-205ENST00000485397 NXPH3O95157 252 aa13.9□□□□□ -0.18
COL27A1-205ENST00000485397 SLC25A4P12235 298 aa13.9□□□□□ -0.18
COL27A1-205ENST00000485397 EIF2B2P49770 351 aaKnown RBP13.9□□□□□ -0.18
COL27A1-205ENST00000485397 YPEL3P61236 119 aaPredicted RBP13.9□□□□□ -0.18
COL27A1-205ENST00000485397 USF2Q15853 346 aaPredicted RBP13.9□□□□□ -0.18
COL27A1-205ENST00000485397 GPR107Q5VW38 600 aa13.9□□□□□ -0.18
COL27A1-205ENST00000485397 TMEM268Q5VZI3 342 aa13.9□□□□□ -0.18
COL27A1-205ENST00000485397 SLC24A4Q8NFF2 622 aa13.9□□□□□ -0.18
COL27A1-205ENST00000485397 RNASEH2CQ8TDP1 164 aaKnown RBP13.9□□□□□ -0.18
COL27A1-205ENST00000485397 TRAV10A0A0B4J240 114 aa13.89□□□□□ -0.19
COL27A1-205ENST00000485397 IL4P05112 153 aa13.89□□□□□ -0.19
COL27A1-205ENST00000485397 SMIM18P0DKX4 95 aa13.89□□□□□ -0.19
COL27A1-205ENST00000485397 CELA1Q9UNI1 258 aa13.89□□□□□ -0.19
COL27A1-205ENST00000485397 GPR132Q9UNW8 380 aa13.89□□□□□ -0.19
COL27A1-205ENST00000485397 IGHV4-4A0A075B6R2 117 aa13.88□□□□□ -0.19
COL27A1-205ENST00000485397 CTDSP2O14595 271 aa13.88□□□□□ -0.19
COL27A1-205ENST00000485397 AP2S1P53680 142 aaPredicted RBP13.88□□□□□ -0.19
COL27A1-205ENST00000485397 SSBP1Q04837 148 aaKnown RBP13.88□□□□□ -0.19
COL27A1-205ENST00000485397 ZNF767PQ75MW2 155 aa13.88□□□□□ -0.19
COL27A1-205ENST00000485397 NPIPB3Q92617 1050 aa13.88□□□□□ -0.19
COL27A1-205ENST00000485397 ACY3Q96HD9 319 aa13.88□□□□□ -0.19
COL27A1-205ENST00000485397 CRYM-AS1A6NIL9 109 aa13.87□□□□□ -0.19
COL27A1-205ENST00000485397 DISC1C4P0D8 188 aa13.87□□□□□ -0.19
COL27A1-205ENST00000485397 FAM90A26D6RGX4 464 aa13.87□□□□□ -0.19
COL27A1-205ENST00000485397 RGS5O15539 181 aa13.87□□□□□ -0.19
COL27A1-205ENST00000485397 NPY1RP25929 384 aa13.87□□□□□ -0.19
COL27A1-205ENST00000485397 SURF2Q15527 256 aaPredicted RBP13.87□□□□□ -0.19
COL27A1-205ENST00000485397 PRR13Q9NZ81 148 aa13.87□□□□□ -0.19
COL27A1-205ENST00000485397 BUB3O43684 328 aa13.86□□□□□ -0.19
COL27A1-205ENST00000485397 MRPS10P82664 201 aaKnown RBP13.86□□□□□ -0.19
COL27A1-205ENST00000485397 C12orf74Q32Q52 190 aa13.86□□□□□ -0.19
COL27A1-205ENST00000485397 ETFRF1Q6IPR1 90 aa13.86□□□□□ -0.19
COL27A1-205ENST00000485397 CENPSQ8N2Z9 138 aa13.86□□□□□ -0.19
COL27A1-205ENST00000485397 OR4C16Q8NGL9 310 aa13.86□□□□□ -0.19
COL27A1-205ENST00000485397 XCL2Q9UBD3 114 aa13.86□□□□□ -0.19
COL27A1-205ENST00000485397 TMEM56-RWDD3S4R434 201 aa13.86□□□□□ -0.19
COL27A1-205ENST00000485397 HECTD4Q9Y4D8 3996 aa13.85□□□□□ -0.19
COL27A1-205ENST00000485397 H3BMM0 161 aa13.85□□□□□ -0.19
COL27A1-205ENST00000485397 TOMM40O96008 361 aa13.85□□□□□ -0.19
COL27A1-205ENST00000485397 AKAIN1P0CW23 69 aa13.85□□□□□ -0.19
COL27A1-205ENST00000485397 RD3LP0DJH9 198 aa13.85□□□□□ -0.19
COL27A1-205ENST00000485397 SNRPD3P62318 126 aaKnown RBP13.85□□□□□ -0.19
COL27A1-205ENST00000485397 SIGLEC15Q6ZMC9 328 aa13.85□□□□□ -0.19
COL27A1-205ENST00000485397 SMIM4Q8WVI0 70 aa13.85□□□□□ -0.19
COL27A1-205ENST00000485397 NRN1Q9NPD7 142 aa13.85□□□□□ -0.19
COL27A1-205ENST00000485397 SULT1A3P0DMM9 295 aa13.84□□□□□ -0.19
COL27A1-205ENST00000485397 SULT1A4P0DMN0 295 aa13.84□□□□□ -0.19
COL27A1-205ENST00000485397 PSG1P11464 419 aa13.84□□□□□ -0.19
COL27A1-205ENST00000485397 SPCS2Q15005 226 aa13.84□□□□□ -0.19
COL27A1-205ENST00000485397 NMSQ5H8A3 153 aa13.84□□□□□ -0.19
COL27A1-205ENST00000485397 OR51S1Q8NGJ8 323 aa13.84□□□□□ -0.19
COL27A1-205ENST00000485397 OR51G1Q8NGK1 321 aa13.84□□□□□ -0.19
COL27A1-205ENST00000485397 RNF126Q9BV68 326 aa13.84□□□□□ -0.19
COL27A1-205ENST00000485397 SCRT1Q9BWW7 348 aa13.84□□□□□ -0.19
COL27A1-205ENST00000485397 DEFB131BA0A096LNP1 70 aa13.83□□□□□ -0.2
COL27A1-205ENST00000485397 IFNA10P01566 189 aa13.83□□□□□ -0.2
COL27A1-205ENST00000485397 DEFB1P60022 68 aa13.83□□□□□ -0.2
COL27A1-205ENST00000485397 NUTF2P61970 127 aaKnown RBP13.83□□□□□ -0.2
COL27A1-205ENST00000485397 NOXA1Q86UR1 476 aa13.83□□□□□ -0.2
COL27A1-205ENST00000485397 C1QTNF4Q9BXJ3 329 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms