RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, human

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB1-208	ENST00000484729	IGLL5	B9A064	214 aa		11.19	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	DEFB4A	O15263	64 aa		11.19	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	TMEM50A	O95807	157 aa		11.19	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729		P0C879	139 aa		11.19	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	RNASE2	P10153	161 aa	Known RBP	11.19	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	OPRK1	P41145	380 aa		11.19	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	BAK1	Q16611	211 aa		11.19	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	SP6	Q3SY56	376 aa		11.19	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	LINC00336	Q6ZUF6	198 aa		11.19	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	LILRB2	Q8N423	598 aa		11.19	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	FAM24B	Q8N5W8	94 aa		11.19	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	TERB2	Q8NHR7	220 aa		11.19	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	MARCH1	Q8TCQ1	289 aa		11.19	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	RRNAD1	Q96FB5	475 aa	Known RBP	11.19	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	WDR12	Q9GZL7	423 aa	Known RBP	11.19	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	MFF	Q9GZY8	342 aa		11.19	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	C11orf68	Q9H3H3	251 aa	Known RBP	11.19	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	LINC00854	A0A1B0GVQ3	168 aa		11.18	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	INS-IGF2	F8WCM5	200 aa		11.18	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	SCGB2A1	O75556	95 aa		11.18	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	IL7	P13232	177 aa		11.18	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	TMEM187	Q14656	261 aa		11.18	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	ZNF846	Q147U1	533 aa		11.18	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	OR13C8	Q8NGS7	320 aa		11.18	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	ZFAND1	Q8TCF1	268 aa		11.18	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	SDHC	Q99643	169 aa	Predicted RBP	11.18	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	CCDC32	Q9BV29	185 aa		11.18	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	MRPL36	Q9P0J6	103 aa	Known RBP	11.18	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	C14orf166	Q9Y224	244 aa	Known RBP	11.18	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	TRAV2	A0A0B4J234	112 aa		11.17	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729		A0A0G2JRQ6	117 aa		11.17	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729		A0A1W2PS18	150 aa		11.17	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	NPPC	P23582	126 aa		11.17	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	PVRIG	Q6DKI7	326 aa		11.17	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	STH	Q8IWL8	128 aa		11.17	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	STXBP6	Q8NFX7	210 aa		11.17	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	DEDD2	Q8WXF8	326 aa		11.17	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	METTL26	Q96S19	204 aa		11.17	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.17	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	FAT2	Q9NYQ8	4349 aa		11.17	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	DNAH6	Q9C0G6	4158 aa		11.17	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	CENPX	A8MT69	81 aa		11.16	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	CLN5	O75503	358 aa		11.16	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	UCP1	P25874	307 aa		11.16	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	SURF2	Q15527	256 aa	Predicted RBP	11.16	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	TMEM230	Q96A57	120 aa		11.16	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	NARS2	Q96I59	477 aa	Known RBP	11.16	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	DNAH2	Q9P225	4427 aa		11.15	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	P2RY1	P47900	373 aa		11.15	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	TCTA	P57738	103 aa		11.15	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	MLANA	Q16655	118 aa		11.15	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	OR4X1	Q8NH49	305 aa		11.15	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	SCGB3A2	Q96PL1	93 aa		11.15	□□□□□ -0.62
HLA-DQB1-208	ENST00000484729	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.14	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	NAP1L6	A6NFF2	107 aa		11.14	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	PRSS29P	A6NIE9	313 aa		11.14	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	B3GALNT1	O75752	331 aa		11.14	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	OR5AC1	P0C628	307 aa		11.14	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	ZNF688	P0C7X2	276 aa		11.14	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	SPCS3	P61009	180 aa		11.14	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	TIGIT	Q495A1	244 aa		11.14	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	GRAMD2B	Q96HH9	432 aa		11.14	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	C7orf50	Q9BRJ6	194 aa	Known RBP	11.14	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	11.13	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	KNCN	A6PVL3	124 aa		11.13	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729		K7EQG2	157 aa		11.13	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	IGKV1-17	P01599	117 aa		11.13	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	CRYBB3	P26998	211 aa		11.13	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	HTR2B	P41595	481 aa		11.13	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	BSX	Q3C1V8	233 aa		11.13	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729		Q6ZRM9	215 aa		11.13	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	TRPT1	Q86TN4	253 aa	Known RBP	11.13	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	FAM219A	Q8IW50	185 aa		11.13	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	TMEM222	Q9H0R3	208 aa		11.13	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	HEYL	Q9NQ87	328 aa	Predicted RBP	11.13	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	DNAH17	Q9UFH2	4485 aa		11.13	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	TRAV30	A0A087WSZ9	112 aa		11.12	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	RTL8C	O15255	209 aa		11.12	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	LYRM1	O43325	122 aa		11.12	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	SPP1	P10451	314 aa		11.12	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	EIF2B2	P49770	351 aa	Known RBP	11.12	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	CCR6	P51684	374 aa		11.12	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	RND2	P52198	227 aa		11.12	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	TMED4	Q7Z7H5	227 aa		11.12	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729		Q8NAQ8	132 aa		11.12	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	LHFPL5	Q8TAF8	219 aa		11.12	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	RBPMS	Q93062	196 aa	Known RBP	11.12	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	NAA60	Q9H7X0	242 aa		11.12	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.12	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	CACNG5	Q9UF02	275 aa		11.12	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	GPR132	Q9UNW8	380 aa		11.12	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	IGHV4-28	A0A0C4DH34	117 aa		11.11	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	CEBPZOS	A8MTT3	80 aa		11.11	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729		M0R2N4	97 aa		11.11	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	UPK1B	O75841	260 aa		11.11	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	CDS2	O95674	445 aa		11.11	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	AKR1C4	P17516	323 aa		11.11	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	C4BPB	P20851	252 aa		11.11	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	ACTL10	Q5JWF8	245 aa		11.11	□□□□□ -0.63
HLA-DQB1-208	ENST00000484729	TMEM268	Q5VZI3	342 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms