RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 CLVS1Q8IUQ0 354 aaPredicted RBP4.61□□□□□ -1.67
PTCD3-215ENST00000484203 DEFB125Q8N687 156 aa4.61□□□□□ -1.67
PTCD3-215ENST00000484203 TMEM217Q8N7C4 229 aa4.61□□□□□ -1.67
PTCD3-215ENST00000484203 UBAC2Q8NBM4 344 aa4.61□□□□□ -1.67
PTCD3-215ENST00000484203 TMEM116Q8NCL8 245 aa4.61□□□□□ -1.67
PTCD3-215ENST00000484203 OR13C8Q8NGS7 320 aa4.61□□□□□ -1.67
PTCD3-215ENST00000484203 RBPMSQ93062 196 aaKnown RBP4.61□□□□□ -1.67
PTCD3-215ENST00000484203 OR10C1Q96KK4 312 aa4.61□□□□□ -1.67
PTCD3-215ENST00000484203 NXF2Q9GZY0 626 aaKnown RBP4.61□□□□□ -1.67
PTCD3-215ENST00000484203 TMEM222Q9H0R3 208 aa4.61□□□□□ -1.67
PTCD3-215ENST00000484203 EDA2RQ9HAV5 297 aa4.61□□□□□ -1.67
PTCD3-215ENST00000484203 S4R3C0 116 aa4.61□□□□□ -1.67
PTCD3-215ENST00000484203 TRAV2A0A0B4J234 112 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 A0A0B4J293 547 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 IGHV3-35A0A0C4DH35 117 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 IGHV7-4-1A0A0J9YVY3 117 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 CTDSP2O14595 271 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 DFFBO76075 338 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 JTBO76095 146 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 IGKV1-39P01597 117 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 IGKV1D-39P04432 117 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 P0C879 139 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 SLC25A4P12235 298 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 PPP5CP53041 499 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 PVRIGQ6DKI7 326 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 KRTAP5-3Q6L8H2 238 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 ZNF600Q6ZNG1 722 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 OR4X1Q8NH49 305 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 RNASEH2CQ8TDP1 164 aaKnown RBP4.6□□□□□ -1.67
PTCD3-215ENST00000484203 CACNG8Q8WXS5 425 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 GALNT14Q96FL9 552 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 TP53RKQ96S44 253 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 CHRDL1Q9BU40 450 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 RHPN1-AS1Q9BWJ2 59 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 NAA50Q9GZZ1 169 aaKnown RBP4.6□□□□□ -1.67
PTCD3-215ENST00000484203 NAA60Q9H7X0 242 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 SMPXQ9UHP9 88 aa4.6□□□□□ -1.67
PTCD3-215ENST00000484203 RBMY1BA6NDE4 496 aaKnown RBP4.59□□□□□ -1.67
PTCD3-215ENST00000484203 RBMY1EA6NEQ0 496 aaKnown RBP4.59□□□□□ -1.67
PTCD3-215ENST00000484203 FABP12A6NFH5 140 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 CRYM-AS1A6NIL9 109 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 CHEK1O14757 476 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 ST8SIA3O43173 380 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 CLN5O75503 358 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 IGKV1-5P01602 117 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 FABP1P07148 127 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 RBMY1DP0C7P1 496 aaKnown RBP4.59□□□□□ -1.67
PTCD3-215ENST00000484203 NPPCP23582 126 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 S100A5P33763 92 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 NUP62P37198 522 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-215ENST00000484203 OPRK1P41145 380 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 AP2S1P53680 142 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-215ENST00000484203 MFAP2P55001 183 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 SPCS2Q15005 226 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 TMEM41BQ5BJD5 291 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 RNASE12Q5GAN4 147 aaKnown RBP4.59□□□□□ -1.67
PTCD3-215ENST00000484203 MARCH1Q8TCQ1 289 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 DYNC2LI1Q8TCX1 351 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 GLYATL2Q8WU03 294 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 DNAH7Q8WXX0 4024 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 PINX1Q96BK5 328 aaKnown RBP4.59□□□□□ -1.67
PTCD3-215ENST00000484203 GRAMD2BQ96HH9 432 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 METTL26Q96S19 204 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 HEYLQ9NQ87 328 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-215ENST00000484203 GPR132Q9UNW8 380 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 TMEM56-RWDD3S4R434 201 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 U3KQ87 197 aa4.59□□□□□ -1.67
PTCD3-215ENST00000484203 HUWE1Q7Z6Z7 4374 aaKnown RBP4.58□□□□□ -1.68
PTCD3-215ENST00000484203 TENM2Q9NT68 2774 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 IGHV3-21A0A0B4J1V1 117 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 A0A0B4J2A0 478 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 DUXBA0A1W2PPF3 345 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 ANKRD20A5PA0PJZ0 165 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 HELTA6NFD8 242 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 CEBPZOSA8MTT3 80 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 ZNF701M0R085 212 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-215ENST00000484203 DNASE2O00115 360 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-215ENST00000484203 SPRY2O43597 315 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 TMEM50AO95807 157 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 OR5AC1P0C628 307 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 SULT1A3P0DMM9 295 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 SULT1A4P0DMN0 295 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 RNASE2P10153 161 aaKnown RBP4.58□□□□□ -1.68
PTCD3-215ENST00000484203 S100A7P31151 101 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 ETV6P41212 452 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 CCR6P51684 374 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 YPEL3P61236 119 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-215ENST00000484203 RPP30P78346 268 aaKnown RBP4.58□□□□□ -1.68
PTCD3-215ENST00000484203 BSXQ3C1V8 233 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 SP6Q3SY56 376 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 C2orf83Q53S99 150 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 TMEM268Q5VZI3 342 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 TOMM20LQ6UXN7 152 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 LGI3Q8N145 548 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 OR4D10Q8NGI6 311 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 OR51S1Q8NGJ8 323 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 OR4C16Q8NGL9 310 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 MCFD2Q8NI22 146 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 Q8WTZ3 238 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 GATAD1Q8WUU5 269 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms