RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 GINS3Q9BRX5 216 aa7.53□□□□□ -1.2
CPSF4-213ENST00000484112 CHRDL1Q9BU40 450 aa7.53□□□□□ -1.2
CPSF4-213ENST00000484112 RBKSQ9H477 322 aa7.53□□□□□ -1.2
CPSF4-213ENST00000484112 NUDT15Q9NV35 164 aa7.53□□□□□ -1.2
CPSF4-213ENST00000484112 SYNGR2O43760 224 aa7.52□□□□□ -1.21
CPSF4-213ENST00000484112 IL5P05113 134 aa7.52□□□□□ -1.21
CPSF4-213ENST00000484112 H2AFB2P0C5Z0 115 aa7.52□□□□□ -1.21
CPSF4-213ENST00000484112 ID3Q02535 119 aa7.52□□□□□ -1.21
CPSF4-213ENST00000484112 UNQ9165/PRO28630Q6UXU0 137 aa7.52□□□□□ -1.21
CPSF4-213ENST00000484112 ZNF600Q6ZNG1 722 aa7.52□□□□□ -1.21
CPSF4-213ENST00000484112 UXS1Q8NBZ7 420 aa7.52□□□□□ -1.21
CPSF4-213ENST00000484112 OR1S2Q8NGQ3 325 aa7.52□□□□□ -1.21
CPSF4-213ENST00000484112 ZNF431Q8TF32 576 aaPredicted RBP7.52□□□□□ -1.21
CPSF4-213ENST00000484112 CHAC2Q8WUX2 184 aa7.52□□□□□ -1.21
CPSF4-213ENST00000484112 FNDC4Q9H6D8 234 aaPredicted RBP7.52□□□□□ -1.21
CPSF4-213ENST00000484112 TRAV6A0A075B6T7 132 aa7.51□□□□□ -1.21
CPSF4-213ENST00000484112 TRAV14DV4A0A0A6YYC5 116 aa7.51□□□□□ -1.21
CPSF4-213ENST00000484112 IGHV3-21A0A0B4J1V1 117 aa7.51□□□□□ -1.21
CPSF4-213ENST00000484112 PRAF2O60831 178 aa7.51□□□□□ -1.21
CPSF4-213ENST00000484112 NKX2-1P43699 371 aaPredicted RBP7.51□□□□□ -1.21
CPSF4-213ENST00000484112 YPEL3P61236 119 aaPredicted RBP7.51□□□□□ -1.21
CPSF4-213ENST00000484112 CD300EQ496F6 205 aaPredicted RBP7.51□□□□□ -1.21
CPSF4-213ENST00000484112 LAMTOR1Q6IAA8 161 aa7.51□□□□□ -1.21
CPSF4-213ENST00000484112 PRSS54Q6PEW0 395 aa7.51□□□□□ -1.21
CPSF4-213ENST00000484112 OR4D5Q8NGN0 318 aa7.51□□□□□ -1.21
CPSF4-213ENST00000484112 TMEM170AQ8WVE7 144 aa7.51□□□□□ -1.21
CPSF4-213ENST00000484112 GPN1Q9HCN4 374 aaPredicted RBP7.51□□□□□ -1.21
CPSF4-213ENST00000484112 CSMD3Q7Z407 3707 aa7.51□□□□□ -1.21
CPSF4-213ENST00000484112 hCG_2014768A0A024R1R8 64 aa7.5□□□□□ -1.21
CPSF4-213ENST00000484112 IZUMO1RA6ND01 250 aa7.5□□□□□ -1.21
CPSF4-213ENST00000484112 WRBO00258 174 aa7.5□□□□□ -1.21
CPSF4-213ENST00000484112 PFDN1O60925 122 aa7.5□□□□□ -1.21
CPSF4-213ENST00000484112 ADAP1O75689 374 aa7.5□□□□□ -1.21
CPSF4-213ENST00000484112 SCAF4O95104 1147 aaKnown RBP7.5□□□□□ -1.21
CPSF4-213ENST00000484112 NXPH3O95157 252 aa7.5□□□□□ -1.21
CPSF4-213ENST00000484112 IFNA4P05014 189 aa7.5□□□□□ -1.21
CPSF4-213ENST00000484112 FABP1P07148 127 aa7.5□□□□□ -1.21
CPSF4-213ENST00000484112 TAS2R30P59541 319 aa7.5□□□□□ -1.21
CPSF4-213ENST00000484112 CD81P60033 236 aa7.5□□□□□ -1.21
CPSF4-213ENST00000484112 IAH1Q2TAA2 248 aaPredicted RBP7.5□□□□□ -1.21
CPSF4-213ENST00000484112 TM4SF20Q53R12 229 aa7.5□□□□□ -1.21
CPSF4-213ENST00000484112 RBPMS2Q6ZRY4 209 aaKnown RBP7.5□□□□□ -1.21
CPSF4-213ENST00000484112 SLC16A13Q7RTY0 426 aa7.5□□□□□ -1.21
CPSF4-213ENST00000484112 C12orf45Q8N5I9 185 aaPredicted RBP7.5□□□□□ -1.21
CPSF4-213ENST00000484112 RAB40CQ96S21 281 aa7.5□□□□□ -1.21
CPSF4-213ENST00000484112 SPAG8Q99932 426 aaPredicted RBP7.5□□□□□ -1.21
CPSF4-213ENST00000484112 TMEM231Q9H6L2 316 aa7.5□□□□□ -1.21
CPSF4-213ENST00000484112 IGHV3-35A0A0C4DH35 117 aa7.49□□□□□ -1.21
CPSF4-213ENST00000484112 IGHV7-4-1A0A0J9YVY3 117 aa7.49□□□□□ -1.21
CPSF4-213ENST00000484112 A0A1W2PS18 150 aa7.49□□□□□ -1.21
CPSF4-213ENST00000484112 SNRPGP15A8MWD9 76 aa7.49□□□□□ -1.21
CPSF4-213ENST00000484112 TSPAN4O14817 238 aa7.49□□□□□ -1.21
CPSF4-213ENST00000484112 YIF1AO95070 293 aa7.49□□□□□ -1.21
CPSF4-213ENST00000484112 LY6G6CO95867 125 aa7.49□□□□□ -1.21
CPSF4-213ENST00000484112 IGLC1P0CG04 106 aa7.49□□□□□ -1.21
CPSF4-213ENST00000484112 OR10J1P30954 320 aa7.49□□□□□ -1.21
CPSF4-213ENST00000484112 RND2P52198 227 aa7.49□□□□□ -1.21
CPSF4-213ENST00000484112 TOMM20LQ6UXN7 152 aa7.49□□□□□ -1.21
CPSF4-213ENST00000484112 NRARPQ7Z6K4 114 aa7.49□□□□□ -1.21
CPSF4-213ENST00000484112 ZBTB8BQ8NAP8 495 aaPredicted RBP7.49□□□□□ -1.21
CPSF4-213ENST00000484112 Q8WTZ3 238 aa7.49□□□□□ -1.21
CPSF4-213ENST00000484112 NARS2Q96I59 477 aaKnown RBP7.49□□□□□ -1.21
CPSF4-213ENST00000484112 SLC35E1Q96K37 410 aa7.49□□□□□ -1.21
CPSF4-213ENST00000484112 SMIM8Q96KF7 97 aa7.49□□□□□ -1.21
CPSF4-213ENST00000484112 NEURL2Q9BR09 285 aa7.49□□□□□ -1.21
CPSF4-213ENST00000484112 MARVELD1Q9BSK0 173 aa7.49□□□□□ -1.21
CPSF4-213ENST00000484112 C20orf24Q9BUV8 137 aa7.49□□□□□ -1.21
CPSF4-213ENST00000484112 MLXQ9UH92 298 aa7.49□□□□□ -1.21
CPSF4-213ENST00000484112 SMPXQ9UHP9 88 aa7.49□□□□□ -1.21
CPSF4-213ENST00000484112 STRAPQ9Y3F4 350 aaKnown RBP7.49□□□□□ -1.21
CPSF4-213ENST00000484112 PUS1Q9Y606 427 aaKnown RBP eCLIP7.49□□□□□ -1.21
CPSF4-213ENST00000484112 ZNF785A8K8V0 405 aa7.48□□□□□ -1.21
CPSF4-213ENST00000484112 TSC22D2O75157 780 aa7.48□□□□□ -1.21
CPSF4-213ENST00000484112 CFDP00746 253 aaPredicted RBP7.48□□□□□ -1.21
CPSF4-213ENST00000484112 IGKV1-17P01599 117 aa7.48□□□□□ -1.21
CPSF4-213ENST00000484112 IGHV3-48P01763 117 aa7.48□□□□□ -1.21
CPSF4-213ENST00000484112 NUP62P37198 522 aaPredicted RBP7.48□□□□□ -1.21
CPSF4-213ENST00000484112 CMC4P56277 68 aaPredicted RBP7.48□□□□□ -1.21
CPSF4-213ENST00000484112 BTNL8Q6UX41 500 aa7.48□□□□□ -1.21
CPSF4-213ENST00000484112 TMEM61Q8N0U2 210 aa7.48□□□□□ -1.21
CPSF4-213ENST00000484112 DEFB125Q8N687 156 aa7.48□□□□□ -1.21
CPSF4-213ENST00000484112 OR52B4Q8NGK2 314 aa7.48□□□□□ -1.21
CPSF4-213ENST00000484112 ZNF414Q96IQ9 312 aa7.48□□□□□ -1.21
CPSF4-213ENST00000484112 METTL26Q96S19 204 aa7.48□□□□□ -1.21
CPSF4-213ENST00000484112 VSIRQ9H7M9 311 aa7.48□□□□□ -1.21
CPSF4-213ENST00000484112 ZFAND3Q9H8U3 227 aa7.48□□□□□ -1.21
CPSF4-213ENST00000484112 PFDN2Q9UHV9 154 aa7.48□□□□□ -1.21
CPSF4-213ENST00000484112 TRAV2A0A0B4J234 112 aa7.47□□□□□ -1.21
CPSF4-213ENST00000484112 RBMY1BA6NDE4 496 aaKnown RBP7.47□□□□□ -1.21
CPSF4-213ENST00000484112 RBMY1EA6NEQ0 496 aaKnown RBP7.47□□□□□ -1.21
CPSF4-213ENST00000484112 MPTX1A8MV57 137 aa7.47□□□□□ -1.21
CPSF4-213ENST00000484112 FNDC10F2Z333 226 aa7.47□□□□□ -1.21
CPSF4-213ENST00000484112 INMT-MINDY4F8WBC2 141 aa7.47□□□□□ -1.21
CPSF4-213ENST00000484112 CHEK1O14757 476 aa7.47□□□□□ -1.21
CPSF4-213ENST00000484112 TOMM40O96008 361 aa7.47□□□□□ -1.21
CPSF4-213ENST00000484112 CD7P09564 240 aa7.47□□□□□ -1.21
CPSF4-213ENST00000484112 RBMY1DP0C7P1 496 aaKnown RBP7.47□□□□□ -1.21
CPSF4-213ENST00000484112 IAPPP10997 89 aa7.47□□□□□ -1.21
CPSF4-213ENST00000484112 NPPCP23582 126 aa7.47□□□□□ -1.21
CPSF4-213ENST00000484112 CRYBB3P26998 211 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms