RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, human

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RIF1-210	ENST00000484077	ARL3	P36405	182 aa		4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	INPP1	P49441	399 aa		4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	HOXA1	P49639	335 aa	Predicted RBP	4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	SYNJ2BP	P57105	145 aa		4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	PRCD	Q00LT1	54 aa		4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	SP6	Q3SY56	376 aa		4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	TMED4	Q7Z7H5	227 aa		4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	HAPLN4	Q86UW8	402 aa		4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	ZNF429	Q86V71	674 aa		4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	SGPP2	Q8IWX5	399 aa		4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	SLC35G3	Q8N808	338 aa		4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	OR9G4	Q8NGQ1	327 aa		4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	LHFPL5	Q8TAF8	219 aa		4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	DEDD2	Q8WXF8	326 aa		4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	RBPMS	Q93062	196 aa	Known RBP	4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	TMEM230	Q96A57	120 aa		4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	RRNAD1	Q96FB5	475 aa	Known RBP	4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	CXorf58	Q96LI9	332 aa		4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	SCGB3A2	Q96PL1	93 aa		4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	RTBDN	Q9BSG5	229 aa	Predicted RBP	4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	TMEM222	Q9H0R3	208 aa		4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	FKBP11	Q9NYL4	201 aa		4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	THYN1	Q9P016	225 aa		4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	GPR132	Q9UNW8	380 aa		4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	F11R	Q9Y624	299 aa	Known RBP	4.64	□□□□□ -1.67
RIF1-210	ENST00000484077		S4R3C0	116 aa		4.64	□□□□□ -1.67
RIF1-210	ENST00000484077	TRBV7-1	A0A0A6YYK4	115 aa		4.63	□□□□□ -1.67
RIF1-210	ENST00000484077		A0A0G2JRQ6	117 aa		4.63	□□□□□ -1.67
RIF1-210	ENST00000484077	ST8SIA3	O43173	380 aa		4.63	□□□□□ -1.67
RIF1-210	ENST00000484077	ANXA3	P12429	323 aa		4.63	□□□□□ -1.67
RIF1-210	ENST00000484077	DHODH	Q02127	395 aa		4.63	□□□□□ -1.67
RIF1-210	ENST00000484077	DCTN2	Q13561	401 aa	Known RBP	4.63	□□□□□ -1.67
RIF1-210	ENST00000484077	KLK9	Q2XQG4	91 aa		4.63	□□□□□ -1.67
RIF1-210	ENST00000484077	SPINK9	Q5DT21	86 aa		4.63	□□□□□ -1.67
RIF1-210	ENST00000484077	CLEC19A	Q6UXS0	136 aa		4.63	□□□□□ -1.67
RIF1-210	ENST00000484077	FAM219A	Q8IW50	185 aa		4.63	□□□□□ -1.67
RIF1-210	ENST00000484077	OR1L6	Q8NGR2	347 aa		4.63	□□□□□ -1.67
RIF1-210	ENST00000484077	IL22RA2	Q969J5	263 aa		4.63	□□□□□ -1.67
RIF1-210	ENST00000484077	GALNT14	Q96FL9	552 aa		4.63	□□□□□ -1.67
RIF1-210	ENST00000484077	OR4C12	Q96R67	309 aa		4.63	□□□□□ -1.67
RIF1-210	ENST00000484077	CACNG5	Q9UF02	275 aa		4.63	□□□□□ -1.67
RIF1-210	ENST00000484077	KLK9	Q9UKQ9	250 aa		4.63	□□□□□ -1.67
RIF1-210	ENST00000484077	IGHV3-21	A0A0B4J1V1	117 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	NAP1L6	A6NFF2	107 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077		A8MWP6	167 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	TGOLN2	O43493	480 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	GGCT	O75223	188 aa	Known RBP	4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	CDS2	O95674	445 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	IFNA17	P01571	189 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	IGLV1-51	P01701	117 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	HLA-A	P01891	365 aa	Known RBP	4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	IL7	P13232	177 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	GP9	P14770	177 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	AKR1C4	P17516	323 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	MFAP2	P55001	183 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	HSPE1	P61604	102 aa	Known RBP	4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	SUPT4H1	P63272	117 aa	Known RBP	4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	SRPX	P78539	464 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	KLF5	Q13887	457 aa	Predicted RBP	4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	TMEM187	Q14656	261 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	BAK1	Q16611	211 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	TATDN3	Q17R31	274 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	SLC25A24	Q6NUK1	477 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	SELENOH	Q8IZQ5	122 aa	Known RBP	4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	CENPS	Q8N2Z9	138 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	UBAC2	Q8NBM4	344 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	OR1P1	Q8NH06	330 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	ZNF502	Q8TBZ5	544 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	VN1R17P	Q8TDU5	208 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	DYNLRB2	Q8TF09	96 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	GLYATL2	Q8WU03	294 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	SDHC	Q99643	169 aa	Predicted RBP	4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	SLC25A21	Q9BQT8	299 aa	Predicted RBP	4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	SDF2L1	Q9HCN8	221 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	ENY2	Q9NPA8	101 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	ZC4H2	Q9NQZ6	224 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	C21orf62	Q9NYP8	219 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077	TMEM56-RWDD3	S4R434	201 aa		4.62	□□□□□ -1.67
RIF1-210	ENST00000484077		A0A0B4J2A0	478 aa		4.61	□□□□□ -1.67
RIF1-210	ENST00000484077	PIGBOS1	A0A0B4J2F0	54 aa		4.61	□□□□□ -1.67
RIF1-210	ENST00000484077	LINC00854	A0A1B0GVQ3	168 aa		4.61	□□□□□ -1.67
RIF1-210	ENST00000484077	DUXB	A0A1W2PPF3	345 aa		4.61	□□□□□ -1.67
RIF1-210	ENST00000484077	OR2T8	A6NH00	312 aa		4.61	□□□□□ -1.67
RIF1-210	ENST00000484077	C2orf70	A6NJV1	201 aa		4.61	□□□□□ -1.67
RIF1-210	ENST00000484077	INS-IGF2	F8WCM5	200 aa		4.61	□□□□□ -1.67
RIF1-210	ENST00000484077		K7EIM0	57 aa		4.61	□□□□□ -1.67
RIF1-210	ENST00000484077	CORT	O00230	105 aa		4.61	□□□□□ -1.67
RIF1-210	ENST00000484077	SULT1A3	P0DMM9	295 aa		4.61	□□□□□ -1.67
RIF1-210	ENST00000484077	SULT1A4	P0DMN0	295 aa		4.61	□□□□□ -1.67
RIF1-210	ENST00000484077	SPN	P16150	400 aa		4.61	□□□□□ -1.67
RIF1-210	ENST00000484077	EDN2	P20800	178 aa		4.61	□□□□□ -1.67
RIF1-210	ENST00000484077	BTC	P35070	178 aa		4.61	□□□□□ -1.67
RIF1-210	ENST00000484077	CCR6	P51684	374 aa		4.61	□□□□□ -1.67
RIF1-210	ENST00000484077	ERH	P84090	104 aa	Known RBP	4.61	□□□□□ -1.67
RIF1-210	ENST00000484077	AARD	Q4LEZ3	155 aa		4.61	□□□□□ -1.67
RIF1-210	ENST00000484077		Q56UQ5	140 aa		4.61	□□□□□ -1.67
RIF1-210	ENST00000484077	TMEM128	Q5BJH2	165 aa		4.61	□□□□□ -1.67
RIF1-210	ENST00000484077	NMS	Q5H8A3	153 aa		4.61	□□□□□ -1.67
RIF1-210	ENST00000484077	DEFB121	Q5J5C9	76 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms