RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 BLOC1S6Q9UL45 172 aa9.08□□□□□ -0.96
UBR4-213ENST00000483922 MYCBP2O75592 4640 aa9.08□□□□□ -0.96
UBR4-213ENST00000483922 VPS13BQ7Z7G8 4022 aa9.07□□□□□ -0.96
UBR4-213ENST00000483922 IGHV3OR16-12A0A075B7B8 117 aa9.07□□□□□ -0.96
UBR4-213ENST00000483922 LOC100506127A0A0U1RQW1 187 aa9.07□□□□□ -0.96
UBR4-213ENST00000483922 SMIM9A6NGZ8 99 aa9.07□□□□□ -0.96
UBR4-213ENST00000483922 PRM2P04554 102 aa9.07□□□□□ -0.96
UBR4-213ENST00000483922 HNRNPCP07910 306 aaKnown RBP eCLIP9.07□□□□□ -0.96
UBR4-213ENST00000483922 HTN3P15516 51 aa9.07□□□□□ -0.96
UBR4-213ENST00000483922 PI3P19957 117 aa9.07□□□□□ -0.96
UBR4-213ENST00000483922 OPRK1P41145 380 aa9.07□□□□□ -0.96
UBR4-213ENST00000483922 KCTD21Q4G0X4 260 aa9.07□□□□□ -0.96
UBR4-213ENST00000483922 PRSS54Q6PEW0 395 aa9.07□□□□□ -0.96
UBR4-213ENST00000483922 YTHDF1Q9BYJ9 559 aaKnown RBP9.07□□□□□ -0.96
UBR4-213ENST00000483922 WDR12Q9GZL7 423 aaKnown RBP9.07□□□□□ -0.96
UBR4-213ENST00000483922 NRN1Q9NPD7 142 aa9.07□□□□□ -0.96
UBR4-213ENST00000483922 RFNGQ9Y644 331 aa9.07□□□□□ -0.96
UBR4-213ENST00000483922 PRSS3P35030 304 aa9.06□□□□□ -0.96
UBR4-213ENST00000483922 RPS19P39019 145 aaKnown RBP9.06□□□□□ -0.96
UBR4-213ENST00000483922 AP2S1P53680 142 aaPredicted RBP9.06□□□□□ -0.96
UBR4-213ENST00000483922 NUTF2P61970 127 aaKnown RBP9.06□□□□□ -0.96
UBR4-213ENST00000483922 OXA1LQ15070 435 aa9.06□□□□□ -0.96
UBR4-213ENST00000483922 TMEM69Q5SWH9 247 aa9.06□□□□□ -0.96
UBR4-213ENST00000483922 LPCAT3Q6P1A2 487 aa9.06□□□□□ -0.96
UBR4-213ENST00000483922 SLC35G3Q8N808 338 aa9.06□□□□□ -0.96
UBR4-213ENST00000483922 ZNRF2Q8NHG8 242 aa9.06□□□□□ -0.96
UBR4-213ENST00000483922 SLC35B3Q9H1N7 401 aa9.06□□□□□ -0.96
UBR4-213ENST00000483922 SEPSECSQ9HD40 501 aaKnown RBP9.06□□□□□ -0.96
UBR4-213ENST00000483922 NBDYA0A0U1RRE5 68 aa9.05□□□□□ -0.96
UBR4-213ENST00000483922 TMEM189A5PLL7 270 aa9.05□□□□□ -0.96
UBR4-213ENST00000483922 CORTO00230 105 aa9.05□□□□□ -0.96
UBR4-213ENST00000483922 NKX2-1P43699 371 aaPredicted RBP9.05□□□□□ -0.96
UBR4-213ENST00000483922 RND2P52198 227 aa9.05□□□□□ -0.96
UBR4-213ENST00000483922 YPEL3P61236 119 aaPredicted RBP9.05□□□□□ -0.96
UBR4-213ENST00000483922 TSPAN5P62079 268 aa9.05□□□□□ -0.96
UBR4-213ENST00000483922 SP6Q3SY56 376 aa9.05□□□□□ -0.96
UBR4-213ENST00000483922 UBE2NLQ5JXB2 153 aa9.05□□□□□ -0.96
UBR4-213ENST00000483922 SAMD12Q8N8I0 201 aa9.05□□□□□ -0.96
UBR4-213ENST00000483922 Q8WTZ3 238 aa9.05□□□□□ -0.96
UBR4-213ENST00000483922 SAV1Q9H4B6 383 aaPredicted RBP9.05□□□□□ -0.96
UBR4-213ENST00000483922 YTHDF2Q9Y5A9 579 aaKnown RBP9.05□□□□□ -0.96
UBR4-213ENST00000483922 TRAV30A0A087WSZ9 112 aa9.04□□□□□ -0.96
UBR4-213ENST00000483922 F6UB75 175 aa9.04□□□□□ -0.96
UBR4-213ENST00000483922 SOCS3O14543 225 aa9.04□□□□□ -0.96
UBR4-213ENST00000483922 IL4P05112 153 aa9.04□□□□□ -0.96
UBR4-213ENST00000483922 ELK1P19419 428 aa9.04□□□□□ -0.96
UBR4-213ENST00000483922 HOXA1P49639 335 aaPredicted RBP9.04□□□□□ -0.96
UBR4-213ENST00000483922 SUB1P53999 127 aaKnown RBP eCLIP9.04□□□□□ -0.96
UBR4-213ENST00000483922 KRTAP10-2P60368 255 aa9.04□□□□□ -0.96
UBR4-213ENST00000483922 RND3P61587 244 aa9.04□□□□□ -0.96
UBR4-213ENST00000483922 SNRPD3P62318 126 aaKnown RBP9.04□□□□□ -0.96
UBR4-213ENST00000483922 AARDQ4LEZ3 155 aa9.04□□□□□ -0.96
UBR4-213ENST00000483922 SIGLEC15Q6ZMC9 328 aa9.04□□□□□ -0.96
UBR4-213ENST00000483922 LHFPL1Q86WI0 220 aa9.04□□□□□ -0.96
UBR4-213ENST00000483922 C6orf223Q8N319 242 aa9.04□□□□□ -0.96
UBR4-213ENST00000483922 OR1S2Q8NGQ3 325 aa9.04□□□□□ -0.96
UBR4-213ENST00000483922 C17orf77Q96MU5 243 aa9.04□□□□□ -0.96
UBR4-213ENST00000483922 RAB26Q9ULW5 256 aa9.04□□□□□ -0.96
UBR4-213ENST00000483922 LOC102723971A0A1B0GUV8 181 aa9.03□□□□□ -0.96
UBR4-213ENST00000483922 M0QYG6 137 aa9.03□□□□□ -0.96
UBR4-213ENST00000483922 OR10J1P30954 320 aa9.03□□□□□ -0.96
UBR4-213ENST00000483922 ZNF79Q15937 498 aa9.03□□□□□ -0.96
UBR4-213ENST00000483922 NPIPB3Q92617 1050 aa9.03□□□□□ -0.96
UBR4-213ENST00000483922 FCGR1BQ92637 280 aa9.03□□□□□ -0.96
UBR4-213ENST00000483922 NARS2Q96I59 477 aaKnown RBP9.03□□□□□ -0.96
UBR4-213ENST00000483922 CLUHP3Q96NS8 147 aa9.03□□□□□ -0.96
UBR4-213ENST00000483922 C3orf85A0A1B0GTC6 90 aa9.02□□□□□ -0.97
UBR4-213ENST00000483922 TMEM127O75204 238 aa9.02□□□□□ -0.97
UBR4-213ENST00000483922 PSG1P11464 419 aa9.02□□□□□ -0.97
UBR4-213ENST00000483922 EIF2B2P49770 351 aaKnown RBP9.02□□□□□ -0.97
UBR4-213ENST00000483922 PIGPP57054 158 aa9.02□□□□□ -0.97
UBR4-213ENST00000483922 FAM3BP58499 235 aaPredicted RBP9.02□□□□□ -0.97
UBR4-213ENST00000483922 SPATA12Q7Z6I5 190 aa9.02□□□□□ -0.97
UBR4-213ENST00000483922 OR4B1Q8NGF8 309 aa9.02□□□□□ -0.97
UBR4-213ENST00000483922 LHFPL5Q8TAF8 219 aa9.02□□□□□ -0.97
UBR4-213ENST00000483922 LINC00052Q96N35 136 aa9.02□□□□□ -0.97
UBR4-213ENST00000483922 KRTAP1-5Q9BYS1 174 aa9.02□□□□□ -0.97
UBR4-213ENST00000483922 KLK11Q9UBX7 282 aa9.02□□□□□ -0.97
UBR4-213ENST00000483922 LINC00588Q9Y4M8 146 aa9.02□□□□□ -0.97
UBR4-213ENST00000483922 TOMM40O96008 361 aa9.01□□□□□ -0.97
UBR4-213ENST00000483922 S100GP29377 79 aa9.01□□□□□ -0.97
UBR4-213ENST00000483922 AKR1C2P52895 323 aa9.01□□□□□ -0.97
UBR4-213ENST00000483922 FCN2Q15485 313 aa9.01□□□□□ -0.97
UBR4-213ENST00000483922 C2orf83Q53S99 150 aa9.01□□□□□ -0.97
UBR4-213ENST00000483922 FAM78BQ5VT40 261 aa9.01□□□□□ -0.97
UBR4-213ENST00000483922 AMTNQ6UX39 209 aa9.01□□□□□ -0.97
UBR4-213ENST00000483922 FOXI2Q6ZQN5 318 aa9.01□□□□□ -0.97
UBR4-213ENST00000483922 SNX29P2Q8IUI4 249 aa9.01□□□□□ -0.97
UBR4-213ENST00000483922 OR51G1Q8NGK1 321 aa9.01□□□□□ -0.97
UBR4-213ENST00000483922 C20orf173Q96LM9 149 aa9.01□□□□□ -0.97
UBR4-213ENST00000483922 PLAC8L1A1L4L8 177 aa9□□□□□ -0.97
UBR4-213ENST00000483922 RD3LP0DJH9 198 aa9□□□□□ -0.97
UBR4-213ENST00000483922 PGAM2P15259 253 aa9□□□□□ -0.97
UBR4-213ENST00000483922 UCP1P25874 307 aa9□□□□□ -0.97
UBR4-213ENST00000483922 HTR2BP41595 481 aa9□□□□□ -0.97
UBR4-213ENST00000483922 PAX9P55771 341 aa9□□□□□ -0.97
UBR4-213ENST00000483922 SPCS3P61009 180 aa9□□□□□ -0.97
UBR4-213ENST00000483922 DAD1P61803 113 aa9□□□□□ -0.97
UBR4-213ENST00000483922 PSG9Q00887 426 aa9□□□□□ -0.97
UBR4-213ENST00000483922 OR4D10Q8NGI6 311 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms