RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 IGLC1P0CG04 106 aa11.04□□□□□ -0.64
CLK3-204ENST00000483723 ARL14EPLP0DKL9 152 aa11.04□□□□□ -0.64
CLK3-204ENST00000483723 CRIP2P52943 208 aaPredicted RBP11.04□□□□□ -0.64
CLK3-204ENST00000483723 CD81P60033 236 aa11.04□□□□□ -0.64
CLK3-204ENST00000483723 MEF2BQ02080 365 aaPredicted RBP11.04□□□□□ -0.64
CLK3-204ENST00000483723 SPNS3Q6ZMD2 512 aa11.04□□□□□ -0.64
CLK3-204ENST00000483723 MIR17HGQ75NE6 70 aa11.04□□□□□ -0.64
CLK3-204ENST00000483723 OR1L4Q8NGR5 311 aa11.04□□□□□ -0.64
CLK3-204ENST00000483723 NANPQ8TBE9 248 aa11.04□□□□□ -0.64
CLK3-204ENST00000483723 MRPL32Q9BYC8 188 aaKnown RBP11.04□□□□□ -0.64
CLK3-204ENST00000483723 NKX6-2Q9C056 277 aaPredicted RBP11.04□□□□□ -0.64
CLK3-204ENST00000483723 TECRQ9NZ01 308 aaKnown RBP11.04□□□□□ -0.64
CLK3-204ENST00000483723 PRRC2AP48634 2157 aaKnown RBP11.04□□□□□ -0.64
CLK3-204ENST00000483723 ATP6V0E1O15342 81 aa11.04□□□□□ -0.64
CLK3-204ENST00000483723 GCHFRP30047 84 aa11.04□□□□□ -0.64
CLK3-204ENST00000483723 AKIRIN2Q53H80 203 aa11.04□□□□□ -0.64
CLK3-204ENST00000483723 FAM90A2PQ658T7 463 aa11.04□□□□□ -0.64
CLK3-204ENST00000483723 TMEM219Q86XT9 240 aa11.04□□□□□ -0.64
CLK3-204ENST00000483723 CYB561D1Q8N8Q1 229 aa11.04□□□□□ -0.64
CLK3-204ENST00000483723 CLRN3Q8NCR9 226 aa11.04□□□□□ -0.64
CLK3-204ENST00000483723 SUN5Q8TC36 379 aa11.04□□□□□ -0.64
CLK3-204ENST00000483723 PFDN5Q99471 154 aa11.04□□□□□ -0.64
CLK3-204ENST00000483723 LINC01548A6NM66 108 aa11.03□□□□□ -0.64
CLK3-204ENST00000483723 H3BUX3 64 aa11.03□□□□□ -0.64
CLK3-204ENST00000483723 PAGE4O60829 102 aa11.03□□□□□ -0.64
CLK3-204ENST00000483723 HIST1H1BP16401 226 aaKnown RBP11.03□□□□□ -0.64
CLK3-204ENST00000483723 NPBWR1P48145 328 aa11.03□□□□□ -0.64
CLK3-204ENST00000483723 C19orf54Q5BKX5 351 aa11.03□□□□□ -0.64
CLK3-204ENST00000483723 C9orf139Q6ZV77 190 aa11.03□□□□□ -0.64
CLK3-204ENST00000483723 C16orf82Q7Z2V1 217 aa11.03□□□□□ -0.64
CLK3-204ENST00000483723 OR5T1Q8NG75 326 aa11.03□□□□□ -0.64
CLK3-204ENST00000483723 ZNF503Q96F45 646 aa11.03□□□□□ -0.64
CLK3-204ENST00000483723 TXNDC17Q9BRA2 123 aa11.03□□□□□ -0.64
CLK3-204ENST00000483723 THYN1Q9P016 225 aa11.03□□□□□ -0.64
CLK3-204ENST00000483723 ELOA3CA0A087WX78 387 aaPredicted RBP11.02□□□□□ -0.65
CLK3-204ENST00000483723 TMEM250H0YL14 139 aa11.02□□□□□ -0.65
CLK3-204ENST00000483723 IGKV1-17P01599 117 aa11.02□□□□□ -0.65
CLK3-204ENST00000483723 C8orf88P0DMB2 117 aa11.02□□□□□ -0.65
CLK3-204ENST00000483723 FCGR2BP31994 310 aaPredicted RBP11.02□□□□□ -0.65
CLK3-204ENST00000483723 CYB5R2Q6BCY4 276 aa11.02□□□□□ -0.65
CLK3-204ENST00000483723 UNQ5815/PRO19632Q6UWF5 114 aa11.02□□□□□ -0.65
CLK3-204ENST00000483723 PQLC2Q6ZP29 291 aa11.02□□□□□ -0.65
CLK3-204ENST00000483723 FAM167A-AS1Q96KT0 104 aa11.02□□□□□ -0.65
CLK3-204ENST00000483723 GSX1Q9H4S2 264 aaPredicted RBP11.02□□□□□ -0.65
CLK3-204ENST00000483723 PITPNC1Q9UKF7 332 aa11.02□□□□□ -0.65
CLK3-204ENST00000483723 CELSR2Q9HCU4 2923 aa11.02□□□□□ -0.65
CLK3-204ENST00000483723 NAV2Q8IVL1 2488 aa11.02□□□□□ -0.65
CLK3-204ENST00000483723 TRAV30A0A087WSZ9 112 aa11.01□□□□□ -0.65
CLK3-204ENST00000483723 TRBV9A0A0B4J1U6 114 aa11.01□□□□□ -0.65
CLK3-204ENST00000483723 F8W735 103 aaPredicted RBP11.01□□□□□ -0.65
CLK3-204ENST00000483723 M0QZK8 103 aa11.01□□□□□ -0.65
CLK3-204ENST00000483723 DNASE2O00115 360 aaPredicted RBP11.01□□□□□ -0.65
CLK3-204ENST00000483723 NDUFB8O95169 186 aa11.01□□□□□ -0.65
CLK3-204ENST00000483723 MFAP4P55083 255 aa11.01□□□□□ -0.65
CLK3-204ENST00000483723 TAS2R45P59539 299 aa11.01□□□□□ -0.65
CLK3-204ENST00000483723 BTN1A1Q13410 526 aa11.01□□□□□ -0.65
CLK3-204ENST00000483723 C10orf113Q5VZT2 155 aa11.01□□□□□ -0.65
CLK3-204ENST00000483723 ARL2-SNX15V9GYD0 113 aa11.01□□□□□ -0.65
CLK3-204ENST00000483723 SH2D7A6NKC9 451 aaPredicted RBP11.01□□□□□ -0.65
CLK3-204ENST00000483723 COX7A2P2O60397 106 aa11.01□□□□□ -0.65
CLK3-204ENST00000483723 DEFB112Q30KQ8 113 aa11.01□□□□□ -0.65
CLK3-204ENST00000483723 TIGITQ495A1 244 aa11.01□□□□□ -0.65
CLK3-204ENST00000483723 BCL6BQ8N143 479 aaPredicted RBP11.01□□□□□ -0.65
CLK3-204ENST00000483723 VN1R17PQ8TDU5 208 aa11.01□□□□□ -0.65
CLK3-204ENST00000483723 TXN2Q99757 166 aa11.01□□□□□ -0.65
CLK3-204ENST00000483723 IGHG2P01859 326 aa11□□□□□ -0.65
CLK3-204ENST00000483723 PSG1P11464 419 aa11□□□□□ -0.65
CLK3-204ENST00000483723 YPEL3P61236 119 aaPredicted RBP11□□□□□ -0.65
CLK3-204ENST00000483723 MORN5Q5VZ52 161 aa11□□□□□ -0.65
CLK3-204ENST00000483723 IQCF2Q8IXL9 164 aa11□□□□□ -0.65
CLK3-204ENST00000483723 TMUB1Q9BVT8 246 aa11□□□□□ -0.65
CLK3-204ENST00000483723 SLC25A2Q9BXI2 301 aa11□□□□□ -0.65
CLK3-204ENST00000483723 TMEM167BQ9NRX6 74 aa11□□□□□ -0.65
CLK3-204ENST00000483723 H3BQ15 152 aa10.99□□□□□ -0.65
CLK3-204ENST00000483723 HYPMO75409 117 aa10.99□□□□□ -0.65
CLK3-204ENST00000483723 OR2J3O76001 311 aa10.99□□□□□ -0.65
CLK3-204ENST00000483723 BRI3O95415 125 aa10.99□□□□□ -0.65
CLK3-204ENST00000483723 IGF1P05019 195 aa10.99□□□□□ -0.65
CLK3-204ENST00000483723 FABP1P07148 127 aa10.99□□□□□ -0.65
CLK3-204ENST00000483723 LY6EQ16553 131 aa10.99□□□□□ -0.65
CLK3-204ENST00000483723 WFDC11Q8NEX6 87 aa10.99□□□□□ -0.65
CLK3-204ENST00000483723 OR4F5Q8NH21 305 aa10.99□□□□□ -0.65
CLK3-204ENST00000483723 OR4F4Q96R69 305 aa10.99□□□□□ -0.65
CLK3-204ENST00000483723 FOXC2Q99958 501 aa10.99□□□□□ -0.65
CLK3-204ENST00000483723 PRDM13Q9H4Q3 707 aa10.99□□□□□ -0.65
CLK3-204ENST00000483723 C21orf62Q9NYP8 219 aa10.99□□□□□ -0.65
CLK3-204ENST00000483723 FBXL7Q9UJT9 491 aa10.99□□□□□ -0.65
CLK3-204ENST00000483723 TRAV5A0A0B4J249 113 aa10.98□□□□□ -0.65
CLK3-204ENST00000483723 MDFIC2A0A1B0GVS7 189 aa10.98□□□□□ -0.65
CLK3-204ENST00000483723 FAM74A7A6NL05 159 aa10.98□□□□□ -0.65
CLK3-204ENST00000483723 C11orf94C9JXX5 98 aa10.98□□□□□ -0.65
CLK3-204ENST00000483723 G3V318 75 aa10.98□□□□□ -0.65
CLK3-204ENST00000483723 TOMM40O96008 361 aa10.98□□□□□ -0.65
CLK3-204ENST00000483723 NPPCP23582 126 aa10.98□□□□□ -0.65
CLK3-204ENST00000483723 IER3P46695 156 aa10.98□□□□□ -0.65
CLK3-204ENST00000483723 ECSCRQ19T08 205 aa10.98□□□□□ -0.65
CLK3-204ENST00000483723 ZNF355PQ9NSJ1 428 aa10.98□□□□□ -0.65
CLK3-204ENST00000483723 MRPL27Q9P0M9 148 aaKnown RBP10.98□□□□□ -0.65
CLK3-204ENST00000483723 DOK5Q9P104 306 aa10.98□□□□□ -0.65
CLK3-204ENST00000483723 UNC79Q9P2D8 2635 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms