RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 IGLC1P0CG04 106 aa13.56□□□□□ -0.24
CLK1-211ENST00000481641 TMEM187Q14656 261 aa13.56□□□□□ -0.24
CLK1-211ENST00000481641 SLC24A4Q8NFF2 622 aa13.56□□□□□ -0.24
CLK1-211ENST00000481641 RAB2BQ8WUD1 216 aa13.56□□□□□ -0.24
CLK1-211ENST00000481641 PRRT1Q99946 306 aa13.56□□□□□ -0.24
CLK1-211ENST00000481641 TMEM56-RWDD3S4R434 201 aa13.56□□□□□ -0.24
CLK1-211ENST00000481641 KMT2AQ03164 3969 aa13.55□□□□□ -0.24
CLK1-211ENST00000481641 TRAV30A0A087WSZ9 112 aa13.55□□□□□ -0.24
CLK1-211ENST00000481641 KNCNA6PVL3 124 aa13.55□□□□□ -0.24
CLK1-211ENST00000481641 ZNF688P0C7X2 276 aa13.55□□□□□ -0.24
CLK1-211ENST00000481641 OR10J1P30954 320 aa13.55□□□□□ -0.24
CLK1-211ENST00000481641 STHQ8IWL8 128 aa13.55□□□□□ -0.24
CLK1-211ENST00000481641 OR1S2Q8NGQ3 325 aa13.55□□□□□ -0.24
CLK1-211ENST00000481641 GSTZ1O43708 216 aaPredicted RBP13.54□□□□□ -0.24
CLK1-211ENST00000481641 SCGB2A1O75556 95 aa13.54□□□□□ -0.24
CLK1-211ENST00000481641 GIG44P09565 113 aaPredicted RBP13.54□□□□□ -0.24
CLK1-211ENST00000481641 TMBIM6P55061 237 aa13.54□□□□□ -0.24
CLK1-211ENST00000481641 C11orf45Q8TAV5 145 aa13.54□□□□□ -0.24
CLK1-211ENST00000481641 RNASEH2CQ8TDP1 164 aaKnown RBP13.54□□□□□ -0.24
CLK1-211ENST00000481641 DCANP1Q8TF63 244 aa13.54□□□□□ -0.24
CLK1-211ENST00000481641 MCUBQ9NWR8 336 aa13.54□□□□□ -0.24
CLK1-211ENST00000481641 FBXL17Q9UF56 701 aa13.54□□□□□ -0.24
CLK1-211ENST00000481641 U3KQE9 123 aa13.54□□□□□ -0.24
CLK1-211ENST00000481641 SULT1A3P0DMM9 295 aa13.53□□□□□ -0.24
CLK1-211ENST00000481641 SULT1A4P0DMN0 295 aa13.53□□□□□ -0.24
CLK1-211ENST00000481641 SLC25A4P12235 298 aa13.53□□□□□ -0.24
CLK1-211ENST00000481641 AKR1C4P17516 323 aa13.53□□□□□ -0.24
CLK1-211ENST00000481641 NPY1RP25929 384 aa13.53□□□□□ -0.24
CLK1-211ENST00000481641 TNFSF8P32971 234 aa13.53□□□□□ -0.24
CLK1-211ENST00000481641 USF2Q15853 346 aaPredicted RBP13.53□□□□□ -0.24
CLK1-211ENST00000481641 LYZL2Q7Z4W2 148 aa13.53□□□□□ -0.24
CLK1-211ENST00000481641 Q8WTZ3 238 aa13.53□□□□□ -0.24
CLK1-211ENST00000481641 NPIPB3Q92617 1050 aa13.53□□□□□ -0.24
CLK1-211ENST00000481641 ACY3Q96HD9 319 aa13.53□□□□□ -0.24
CLK1-211ENST00000481641 NARS2Q96I59 477 aaKnown RBP13.53□□□□□ -0.24
CLK1-211ENST00000481641 SLIRPQ9GZT3 109 aaKnown RBP13.53□□□□□ -0.24
CLK1-211ENST00000481641 C11orf68Q9H3H3 251 aaKnown RBP13.53□□□□□ -0.24
CLK1-211ENST00000481641 RABL2AQ9UBK7 228 aaPredicted RBP13.53□□□□□ -0.24
CLK1-211ENST00000481641 SCP2D1Q9UJQ7 156 aa13.53□□□□□ -0.24
CLK1-211ENST00000481641 RABL2BQ9UNT1 228 aa13.53□□□□□ -0.24
CLK1-211ENST00000481641 KCNIP3Q9Y2W7 256 aa13.53□□□□□ -0.24
CLK1-211ENST00000481641 H3BMQ9 156 aa13.52□□□□□ -0.25
CLK1-211ENST00000481641 HNRNPCP07910 306 aaKnown RBP eCLIP13.52□□□□□ -0.25
CLK1-211ENST00000481641 YPEL3P61236 119 aaPredicted RBP13.52□□□□□ -0.25
CLK1-211ENST00000481641 SUPT4H1P63272 117 aaKnown RBP13.52□□□□□ -0.25
CLK1-211ENST00000481641 DHRS2Q13268 280 aa13.52□□□□□ -0.25
CLK1-211ENST00000481641 NMSQ5H8A3 153 aa13.52□□□□□ -0.25
CLK1-211ENST00000481641 C16orf54Q6UWD8 224 aa13.52□□□□□ -0.25
CLK1-211ENST00000481641 TRPT1Q86TN4 253 aaKnown RBP13.52□□□□□ -0.25
CLK1-211ENST00000481641 IL22RA2Q969J5 263 aa13.52□□□□□ -0.25
CLK1-211ENST00000481641 GRAMD2BQ96HH9 432 aa13.52□□□□□ -0.25
CLK1-211ENST00000481641 SOSTQ9BQB4 213 aa13.52□□□□□ -0.25
CLK1-211ENST00000481641 RSL24D1Q9UHA3 163 aaKnown RBP13.52□□□□□ -0.25
CLK1-211ENST00000481641 FABP12A6NFH5 140 aa13.51□□□□□ -0.25
CLK1-211ENST00000481641 IFNA10P01566 189 aa13.51□□□□□ -0.25
CLK1-211ENST00000481641 IL4P05112 153 aa13.51□□□□□ -0.25
CLK1-211ENST00000481641 C4BPBP20851 252 aa13.51□□□□□ -0.25
CLK1-211ENST00000481641 ACTL10Q5JWF8 245 aa13.51□□□□□ -0.25
CLK1-211ENST00000481641 RPP25LQ8N5L8 163 aaKnown RBP13.51□□□□□ -0.25
CLK1-211ENST00000481641 GLMPQ8WWB7 406 aa13.51□□□□□ -0.25
CLK1-211ENST00000481641 BCL7BQ9BQE9 202 aa13.51□□□□□ -0.25
CLK1-211ENST00000481641 RBKSQ9H477 322 aa13.51□□□□□ -0.25
CLK1-211ENST00000481641 DEDDO75618 318 aa13.5□□□□□ -0.25
CLK1-211ENST00000481641 ETFRF1Q6IPR1 90 aa13.5□□□□□ -0.25
CLK1-211ENST00000481641 CLEC5AQ9NY25 188 aa13.5□□□□□ -0.25
CLK1-211ENST00000481641 FRAS1Q86XX4 4008 aa13.49□□□□□ -0.25
CLK1-211ENST00000481641 A0A0B4J2A0 478 aa13.49□□□□□ -0.25
CLK1-211ENST00000481641 RD3LP0DJH9 198 aa13.49□□□□□ -0.25
CLK1-211ENST00000481641 CCR6P51684 374 aa13.49□□□□□ -0.25
CLK1-211ENST00000481641 SMCO1Q147U7 214 aa13.49□□□□□ -0.25
CLK1-211ENST00000481641 PSMG4Q5JS54 123 aa13.49□□□□□ -0.25
CLK1-211ENST00000481641 Q8NAQ8 132 aa13.49□□□□□ -0.25
CLK1-211ENST00000481641 MCFD2Q8NI22 146 aa13.49□□□□□ -0.25
CLK1-211ENST00000481641 DTD1Q8TEA8 209 aa13.49□□□□□ -0.25
CLK1-211ENST00000481641 SCGB3A2Q96PL1 93 aa13.49□□□□□ -0.25
CLK1-211ENST00000481641 MFFQ9GZY8 342 aa13.49□□□□□ -0.25
CLK1-211ENST00000481641 HSPB7Q9UBY9 170 aa13.49□□□□□ -0.25
CLK1-211ENST00000481641 SHPKQ9UHJ6 478 aa13.49□□□□□ -0.25
CLK1-211ENST00000481641 IGHV4-28A0A0C4DH34 117 aa13.48□□□□□ -0.25
CLK1-211ENST00000481641 HELTA6NFD8 242 aa13.48□□□□□ -0.25
CLK1-211ENST00000481641 NOL3O60936 208 aaKnown RBP13.48□□□□□ -0.25
CLK1-211ENST00000481641 TOMM40O96008 361 aa13.48□□□□□ -0.25
CLK1-211ENST00000481641 IFNA4P05014 189 aa13.48□□□□□ -0.25
CLK1-211ENST00000481641 RBMY1A1P0DJD3 496 aaKnown RBP13.48□□□□□ -0.25
CLK1-211ENST00000481641 RBMY1CP0DJD4 496 aa13.48□□□□□ -0.25
CLK1-211ENST00000481641 PSG1P11464 419 aa13.48□□□□□ -0.25
CLK1-211ENST00000481641 RBMY1FQ15415 496 aaKnown RBP13.48□□□□□ -0.25
CLK1-211ENST00000481641 LGI3Q8N145 548 aa13.48□□□□□ -0.25
CLK1-211ENST00000481641 OR51G1Q8NGK1 321 aa13.48□□□□□ -0.25
CLK1-211ENST00000481641 RAB40CQ96S21 281 aa13.48□□□□□ -0.25
CLK1-211ENST00000481641 VPS13DQ5THJ4 4388 aa13.48□□□□□ -0.25
CLK1-211ENST00000481641 SPP1P10451 314 aa13.47□□□□□ -0.25
CLK1-211ENST00000481641 EIF2B2P49770 351 aaKnown RBP13.47□□□□□ -0.25
CLK1-211ENST00000481641 KLF9Q13886 244 aaPredicted RBP13.47□□□□□ -0.25
CLK1-211ENST00000481641 MORN3Q6PF18 240 aaPredicted RBP13.47□□□□□ -0.25
CLK1-211ENST00000481641 NOXA1Q86UR1 476 aa13.47□□□□□ -0.25
CLK1-211ENST00000481641 OR1S1Q8NH92 325 aa13.47□□□□□ -0.25
CLK1-211ENST00000481641 U3KQ87 197 aa13.47□□□□□ -0.25
CLK1-211ENST00000481641 DNAH10Q8IVF4 4471 aa13.47□□□□□ -0.25
CLK1-211ENST00000481641 FAM90A26D6RGX4 464 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms