RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 NOL3O60936 208 aaKnown RBP8.9□□□□□ -0.98
SQSTM1-207ENST00000481335 CA1P00915 261 aaPredicted RBP8.9□□□□□ -0.98
SQSTM1-207ENST00000481335 APOHP02749 345 aaPredicted RBP8.9□□□□□ -0.98
SQSTM1-207ENST00000481335 IGLC1P0CG04 106 aa8.9□□□□□ -0.98
SQSTM1-207ENST00000481335 SULT1A3P0DMM9 295 aa8.9□□□□□ -0.98
SQSTM1-207ENST00000481335 SULT1A4P0DMN0 295 aa8.9□□□□□ -0.98
SQSTM1-207ENST00000481335 SPP1P10451 314 aa8.9□□□□□ -0.98
SQSTM1-207ENST00000481335 P2RY1P47900 373 aa8.9□□□□□ -0.98
SQSTM1-207ENST00000481335 AP2S1P53680 142 aaPredicted RBP8.9□□□□□ -0.98
SQSTM1-207ENST00000481335 ATP5IP56385 69 aaPredicted RBP8.9□□□□□ -0.98
SQSTM1-207ENST00000481335 DEFB131AP59861 70 aa8.9□□□□□ -0.98
SQSTM1-207ENST00000481335 RPL11P62913 178 aaKnown RBP8.9□□□□□ -0.98
SQSTM1-207ENST00000481335 EWSR1Q01844 656 aaKnown RBP eCLIP8.9□□□□□ -0.983e-8■■■□□ 18.8
SQSTM1-207ENST00000481335 TMEM187Q14656 261 aa8.9□□□□□ -0.98
SQSTM1-207ENST00000481335 ZNF124Q15973 351 aa8.9□□□□□ -0.98
SQSTM1-207ENST00000481335 FAAP20Q6NZ36 180 aa8.9□□□□□ -0.98
SQSTM1-207ENST00000481335 MORN3Q6PF18 240 aaPredicted RBP8.9□□□□□ -0.98
SQSTM1-207ENST00000481335 CLVS1Q8IUQ0 354 aaPredicted RBP8.9□□□□□ -0.98
SQSTM1-207ENST00000481335 STHQ8IWL8 128 aa8.9□□□□□ -0.98
SQSTM1-207ENST00000481335 OR51S1Q8NGJ8 323 aa8.9□□□□□ -0.98
SQSTM1-207ENST00000481335 SEPSECSQ9HD40 501 aaKnown RBP8.9□□□□□ -0.98
SQSTM1-207ENST00000481335 AGRNO00468 2067 aa8.9□□□□□ -0.99
SQSTM1-207ENST00000481335 A0A0B4J2A0 478 aa8.89□□□□□ -0.99
SQSTM1-207ENST00000481335 CEBPZOSA8MTT3 80 aa8.89□□□□□ -0.99
SQSTM1-207ENST00000481335 ANXA3P12429 323 aa8.89□□□□□ -0.99
SQSTM1-207ENST00000481335 NPY1RP25929 384 aa8.89□□□□□ -0.99
SQSTM1-207ENST00000481335 FAUP35544 74 aaKnown RBP8.89□□□□□ -0.99
SQSTM1-207ENST00000481335 NUP62P37198 522 aaPredicted RBP8.89□□□□□ -0.99
SQSTM1-207ENST00000481335 TCTAP57738 103 aa8.89□□□□□ -0.99
SQSTM1-207ENST00000481335 NMSQ5H8A3 153 aa8.89□□□□□ -0.99
SQSTM1-207ENST00000481335 PRSS54Q6PEW0 395 aa8.89□□□□□ -0.99
SQSTM1-207ENST00000481335 LILRB2Q8N423 598 aa8.89□□□□□ -0.99
SQSTM1-207ENST00000481335 OR11H2Q8NH07 326 aa8.89□□□□□ -0.99
SQSTM1-207ENST00000481335 DCANP1Q8TF63 244 aa8.89□□□□□ -0.99
SQSTM1-207ENST00000481335 Q8WTZ3 238 aa8.89□□□□□ -0.99
SQSTM1-207ENST00000481335 DEDD2Q8WXF8 326 aa8.89□□□□□ -0.99
SQSTM1-207ENST00000481335 GPR146Q96CH1 333 aa8.89□□□□□ -0.99
SQSTM1-207ENST00000481335 MRPL36Q9P0J6 103 aaKnown RBP8.89□□□□□ -0.99
SQSTM1-207ENST00000481335 SHPKQ9UHJ6 478 aa8.89□□□□□ -0.99
SQSTM1-207ENST00000481335 RABAC1Q9UI14 185 aa8.89□□□□□ -0.99
SQSTM1-207ENST00000481335 U3KQ87 197 aa8.89□□□□□ -0.99
SQSTM1-207ENST00000481335 U3KQE9 123 aa8.89□□□□□ -0.99
SQSTM1-207ENST00000481335 DUXBA0A1W2PPF3 345 aa8.88□□□□□ -0.99
SQSTM1-207ENST00000481335 LY6G6CO95867 125 aa8.88□□□□□ -0.99
SQSTM1-207ENST00000481335 HNRNPCP07910 306 aaKnown RBP eCLIP8.88□□□□□ -0.99
SQSTM1-207ENST00000481335 OR10J1P30954 320 aa8.88□□□□□ -0.99
SQSTM1-207ENST00000481335 CCR6P51684 374 aa8.88□□□□□ -0.99
SQSTM1-207ENST00000481335 RND2P52198 227 aa8.88□□□□□ -0.99
SQSTM1-207ENST00000481335 TIGITQ495A1 244 aa8.88□□□□□ -0.99
SQSTM1-207ENST00000481335 TRPT1Q86TN4 253 aaKnown RBP8.88□□□□□ -0.99
SQSTM1-207ENST00000481335 STXBP6Q8NFX7 210 aa8.88□□□□□ -0.99
SQSTM1-207ENST00000481335 C11orf45Q8TAV5 145 aa8.88□□□□□ -0.99
SQSTM1-207ENST00000481335 PHLDA1Q8WV24 401 aaPredicted RBP8.88□□□□□ -0.99
SQSTM1-207ENST00000481335 SLIRPQ9GZT3 109 aaKnown RBP8.88□□□□□ -0.99
SQSTM1-207ENST00000481335 HRH4Q9H3N8 390 aa8.88□□□□□ -0.99
SQSTM1-207ENST00000481335 HSPB7Q9UBY9 170 aa8.88□□□□□ -0.99
SQSTM1-207ENST00000481335 KMT2AQ03164 3969 aa8.88□□□□□ -0.99
SQSTM1-207ENST00000481335 IGHV3-66A0A0C4DH42 116 aa8.87□□□□□ -0.99
SQSTM1-207ENST00000481335 TOMM40O96008 361 aa8.87□□□□□ -0.99
SQSTM1-207ENST00000481335 AP3S2P59780 193 aa8.87□□□□□ -0.99
SQSTM1-207ENST00000481335 SMCO1Q147U7 214 aa8.87□□□□□ -0.99
SQSTM1-207ENST00000481335 RBMS2Q15434 407 aaKnown RBP8.87□□□□□ -0.99
SQSTM1-207ENST00000481335 MLANAQ16655 118 aa8.87□□□□□ -0.99
SQSTM1-207ENST00000481335 LEMD1Q68G75 181 aa8.87□□□□□ -0.99
SQSTM1-207ENST00000481335 LGALS9CQ6DKI2 356 aa8.87□□□□□ -0.99
SQSTM1-207ENST00000481335 C16orf54Q6UWD8 224 aa8.87□□□□□ -0.99
SQSTM1-207ENST00000481335 FAM24BQ8N5W8 94 aa8.87□□□□□ -0.99
SQSTM1-207ENST00000481335 GLMPQ8WWB7 406 aa8.87□□□□□ -0.99
SQSTM1-207ENST00000481335 SOSTQ9BQB4 213 aa8.87□□□□□ -0.99
SQSTM1-207ENST00000481335 PFDN2Q9UHV9 154 aa8.87□□□□□ -0.99
SQSTM1-207ENST00000481335 C11orf94C9JXX5 98 aa8.86□□□□□ -0.99
SQSTM1-207ENST00000481335 IFNA4P05014 189 aa8.86□□□□□ -0.99
SQSTM1-207ENST00000481335 IL4P05112 153 aa8.86□□□□□ -0.99
SQSTM1-207ENST00000481335 MIFP14174 115 aa8.86□□□□□ -0.99
SQSTM1-207ENST00000481335 SNRPD3P62318 126 aaKnown RBP8.86□□□□□ -0.99
SQSTM1-207ENST00000481335 LGI3Q8N145 548 aa8.86□□□□□ -0.99
SQSTM1-207ENST00000481335 DTD1Q8TEA8 209 aa8.86□□□□□ -0.99
SQSTM1-207ENST00000481335 MCUBQ9NWR8 336 aa8.86□□□□□ -0.99
SQSTM1-207ENST00000481335 FABP12A6NFH5 140 aa8.85□□□□□ -0.99
SQSTM1-207ENST00000481335 ZNF705EA8MWA4 302 aaPredicted RBP8.85□□□□□ -0.99
SQSTM1-207ENST00000481335 H3BMQ9 156 aa8.85□□□□□ -0.99
SQSTM1-207ENST00000481335 BUB3O43684 328 aa8.85□□□□□ -0.99
SQSTM1-207ENST00000481335 IFNA10P01566 189 aa8.85□□□□□ -0.99
SQSTM1-207ENST00000481335 ZNF688P0C7X2 276 aa8.85□□□□□ -0.99
SQSTM1-207ENST00000481335 RD3LP0DJH9 198 aa8.85□□□□□ -0.99
SQSTM1-207ENST00000481335 NUTF2P61970 127 aaKnown RBP8.85□□□□□ -0.99
SQSTM1-207ENST00000481335 SUPT4H1P63272 117 aaKnown RBP8.85□□□□□ -0.99
SQSTM1-207ENST00000481335 DHRS2Q13268 280 aa8.85□□□□□ -0.99
SQSTM1-207ENST00000481335 OR8G2PQ6IF36 304 aa8.85□□□□□ -0.99
SQSTM1-207ENST00000481335 TMEM170AQ8WVE7 144 aa8.85□□□□□ -0.99
SQSTM1-207ENST00000481335 C1QTNF4Q9BXJ3 329 aa8.85□□□□□ -0.99
SQSTM1-207ENST00000481335 NRN1Q9NPD7 142 aa8.85□□□□□ -0.99
SQSTM1-207ENST00000481335 FAM90A26D6RGX4 464 aa8.84□□□□□ -0.99
SQSTM1-207ENST00000481335 FABP1P07148 127 aa8.84□□□□□ -0.99
SQSTM1-207ENST00000481335 SLC25A6P12236 298 aa8.84□□□□□ -0.99
SQSTM1-207ENST00000481335 AKR1C4P17516 323 aa8.84□□□□□ -0.99
SQSTM1-207ENST00000481335 TNFSF8P32971 234 aa8.84□□□□□ -0.99
SQSTM1-207ENST00000481335 GPX4P36969 197 aaPredicted RBP8.84□□□□□ -0.99
SQSTM1-207ENST00000481335 USF2Q15853 346 aaPredicted RBP8.84□□□□□ -0.99
SQSTM1-207ENST00000481335 TMEM128Q5BJH2 165 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms