RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 ATP5IP56385 69 aaPredicted RBP11.13□□□□□ -0.63
TDP2-205ENST00000480495 PRSS54Q6PEW0 395 aa11.13□□□□□ -0.63
TDP2-205ENST00000480495 STPG3Q8N7X2 389 aa11.13□□□□□ -0.63
TDP2-205ENST00000480495 DTD1Q8TEA8 209 aa11.13□□□□□ -0.63
TDP2-205ENST00000480495 NARS2Q96I59 477 aaKnown RBP11.13□□□□□ -0.63
TDP2-205ENST00000480495 IGKV3-7A0A075B6H7 116 aa11.12□□□□□ -0.63
TDP2-205ENST00000480495 DNASE2O00115 360 aaPredicted RBP11.12□□□□□ -0.63
TDP2-205ENST00000480495 DFFBO76075 338 aa11.12□□□□□ -0.63
TDP2-205ENST00000480495 IFNA10P01566 189 aa11.12□□□□□ -0.63
TDP2-205ENST00000480495 IGLC1P0CG04 106 aa11.12□□□□□ -0.63
TDP2-205ENST00000480495 OR10J1P30954 320 aa11.12□□□□□ -0.63
TDP2-205ENST00000480495 RND2P52198 227 aa11.12□□□□□ -0.63
TDP2-205ENST00000480495 YPEL3P61236 119 aaPredicted RBP11.12□□□□□ -0.63
TDP2-205ENST00000480495 TIGITQ495A1 244 aa11.12□□□□□ -0.63
TDP2-205ENST00000480495 WFDC3Q8IUB2 231 aa11.12□□□□□ -0.63
TDP2-205ENST00000480495 LILRB2Q8N423 598 aa11.12□□□□□ -0.63
TDP2-205ENST00000480495 GBGT1Q8N5D6 347 aa11.12□□□□□ -0.63
TDP2-205ENST00000480495 LRTM2Q8N967 370 aa11.12□□□□□ -0.63
TDP2-205ENST00000480495 TMEM170AQ8WVE7 144 aa11.12□□□□□ -0.63
TDP2-205ENST00000480495 MS4A6AQ9H2W1 248 aa11.12□□□□□ -0.63
TDP2-205ENST00000480495 RBKSQ9H477 322 aa11.12□□□□□ -0.63
TDP2-205ENST00000480495 IGHV3-66A0A0C4DH42 116 aa11.11□□□□□ -0.63
TDP2-205ENST00000480495 SPRY2O43597 315 aa11.11□□□□□ -0.63
TDP2-205ENST00000480495 SLC25A6P12236 298 aa11.11□□□□□ -0.63
TDP2-205ENST00000480495 VAMP1P23763 118 aa11.11□□□□□ -0.63
TDP2-205ENST00000480495 RPL11P62913 178 aaKnown RBP11.11□□□□□ -0.63
TDP2-205ENST00000480495 APRG1Q8IVJ8 170 aa11.11□□□□□ -0.63
TDP2-205ENST00000480495 OR1S1Q8NH92 325 aa11.11□□□□□ -0.63
TDP2-205ENST00000480495 Q8WTZ3 238 aa11.11□□□□□ -0.63
TDP2-205ENST00000480495 SRRQ9GZT4 340 aa11.11□□□□□ -0.63
TDP2-205ENST00000480495 MAP6D1Q9H9H5 199 aa11.11□□□□□ -0.63
TDP2-205ENST00000480495 RYR3Q15413 4870 aa11.1□□□□□ -0.63
TDP2-205ENST00000480495 RPL35AP18077 110 aaKnown RBP11.1□□□□□ -0.63
TDP2-205ENST00000480495 RBMS2Q15434 407 aaKnown RBP11.1□□□□□ -0.63
TDP2-205ENST00000480495 CENPSQ8N2Z9 138 aa11.1□□□□□ -0.63
TDP2-205ENST00000480495 NPIPB3Q92617 1050 aa11.1□□□□□ -0.63
TDP2-205ENST00000480495 GRAMD2BQ96HH9 432 aa11.1□□□□□ -0.63
TDP2-205ENST00000480495 NAP1L6A6NFF2 107 aa11.09□□□□□ -0.63
TDP2-205ENST00000480495 FAM90A26D6RGX4 464 aa11.09□□□□□ -0.63
TDP2-205ENST00000480495 PITX3O75364 302 aa11.09□□□□□ -0.63
TDP2-205ENST00000480495 SFT2D2O95562 160 aa11.09□□□□□ -0.63
TDP2-205ENST00000480495 P2RY1P47900 373 aa11.09□□□□□ -0.63
TDP2-205ENST00000480495 INPP1P49441 399 aa11.09□□□□□ -0.63
TDP2-205ENST00000480495 EIF2B2P49770 351 aaKnown RBP11.09□□□□□ -0.63
TDP2-205ENST00000480495 UBE2MP61081 183 aaKnown RBP11.09□□□□□ -0.63
TDP2-205ENST00000480495 DEFB135Q30KP9 77 aa11.09□□□□□ -0.63
TDP2-205ENST00000480495 TRIQKQ629K1 86 aa11.09□□□□□ -0.63
TDP2-205ENST00000480495 RNF183Q96D59 192 aa11.09□□□□□ -0.63
TDP2-205ENST00000480495 ACY3Q96HD9 319 aa11.09□□□□□ -0.63
TDP2-205ENST00000480495 TMED3Q9Y3Q3 217 aa11.09□□□□□ -0.63
TDP2-205ENST00000480495 U3KQE9 123 aa11.09□□□□□ -0.63
TDP2-205ENST00000480495 CSMD3Q7Z407 3707 aa11.09□□□□□ -0.63
TDP2-205ENST00000480495 LCE6AA0A183 80 aa11.08□□□□□ -0.64
TDP2-205ENST00000480495 MED6O75586 246 aa11.08□□□□□ -0.64
TDP2-205ENST00000480495 IFNA4P05014 189 aa11.08□□□□□ -0.64
TDP2-205ENST00000480495 HNRNPCP07910 306 aaKnown RBP eCLIP11.08□□□□□ -0.64
TDP2-205ENST00000480495 GPX4P36969 197 aaPredicted RBP11.08□□□□□ -0.64
TDP2-205ENST00000480495 PPP1R1AQ13522 171 aa11.08□□□□□ -0.64
TDP2-205ENST00000480495 ZNF124Q15973 351 aa11.08□□□□□ -0.64
TDP2-205ENST00000480495 CSTL1Q9H114 145 aa11.08□□□□□ -0.64
TDP2-205ENST00000480495 RABAC1Q9UI14 185 aa11.08□□□□□ -0.64
TDP2-205ENST00000480495 HELTA6NFD8 242 aa11.07□□□□□ -0.64
TDP2-205ENST00000480495 MPTX1A8MV57 137 aa11.07□□□□□ -0.64
TDP2-205ENST00000480495 TOMM40O96008 361 aa11.07□□□□□ -0.64
TDP2-205ENST00000480495 RD3LP0DJH9 198 aa11.07□□□□□ -0.64
TDP2-205ENST00000480495 DEFB131AP59861 70 aa11.07□□□□□ -0.64
TDP2-205ENST00000480495 BAK1Q16611 211 aa11.07□□□□□ -0.64
TDP2-205ENST00000480495 STXBP6Q8NFX7 210 aa11.07□□□□□ -0.64
TDP2-205ENST00000480495 NDUFA13Q9P0J0 144 aa11.07□□□□□ -0.64
TDP2-205ENST00000480495 DYNC2H1Q8NCM8 4307 aaKnown RBP11.07□□□□□ -0.64
TDP2-205ENST00000480495 TENM2Q9NT68 2774 aa11.06□□□□□ -0.64
TDP2-205ENST00000480495 K7EQG2 157 aa11.06□□□□□ -0.64
TDP2-205ENST00000480495 NDUFB6O95139 128 aa11.06□□□□□ -0.64
TDP2-205ENST00000480495 IL4P05112 153 aa11.06□□□□□ -0.64
TDP2-205ENST00000480495 ATF4P18848 351 aaPredicted RBP11.06□□□□□ -0.64
TDP2-205ENST00000480495 AP2S1P53680 142 aaPredicted RBP11.06□□□□□ -0.64
TDP2-205ENST00000480495 RAB11AP62491 216 aa11.06□□□□□ -0.64
TDP2-205ENST00000480495 C16orf54Q6UWD8 224 aa11.06□□□□□ -0.64
TDP2-205ENST00000480495 LYG2Q86SG7 212 aa11.06□□□□□ -0.64
TDP2-205ENST00000480495 GATAD1Q8WUU5 269 aa11.06□□□□□ -0.64
TDP2-205ENST00000480495 SLC35E1Q96K37 410 aa11.06□□□□□ -0.64
TDP2-205ENST00000480495 CIB3Q96Q77 187 aaPredicted RBP11.06□□□□□ -0.64
TDP2-205ENST00000480495 SACSQ9NZJ4 4579 aa11.06□□□□□ -0.64
TDP2-205ENST00000480495 A0A0J9YWU9 116 aa11.05□□□□□ -0.64
TDP2-205ENST00000480495 CENPXA8MT69 81 aa11.05□□□□□ -0.64
TDP2-205ENST00000480495 HOXB5P09067 269 aa11.05□□□□□ -0.64
TDP2-205ENST00000480495 PSG1P11464 419 aa11.05□□□□□ -0.64
TDP2-205ENST00000480495 RPP30P78346 268 aaKnown RBP11.05□□□□□ -0.64
TDP2-205ENST00000480495 USF2Q15853 346 aaPredicted RBP11.05□□□□□ -0.64
TDP2-205ENST00000480495 FAM24BQ8N5W8 94 aa11.05□□□□□ -0.64
TDP2-205ENST00000480495 GLMPQ8WWB7 406 aa11.05□□□□□ -0.64
TDP2-205ENST00000480495 C7orf50Q9BRJ6 194 aaKnown RBP11.05□□□□□ -0.64
TDP2-205ENST00000480495 STARD9Q9P2P6 4700 aa11.05□□□□□ -0.64
TDP2-205ENST00000480495 C9orf170A2RU37 121 aa11.04□□□□□ -0.64
TDP2-205ENST00000480495 ZFP92A6NM28 416 aa11.04□□□□□ -0.64
TDP2-205ENST00000480495 FABP1P07148 127 aa11.04□□□□□ -0.64
TDP2-205ENST00000480495 IAPPP10997 89 aa11.04□□□□□ -0.64
TDP2-205ENST00000480495 NUP62P37198 522 aaPredicted RBP11.04□□□□□ -0.64
TDP2-205ENST00000480495 GAMTQ14353 236 aa11.04□□□□□ -0.64
TDP2-205ENST00000480495 GGNBP1Q5YKI7 109 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms