RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 PSG8Q9UQ74 426 aa11.33□□□□□ -0.6
MCF2L-225ENST00000480321 TRAV8-2A0A0B4J237 113 aa11.33□□□□□ -0.6
MCF2L-225ENST00000480321 RAMP3O60896 148 aa11.33□□□□□ -0.6
MCF2L-225ENST00000480321 OR9G4Q8NGQ1 327 aa11.33□□□□□ -0.6
MCF2L-225ENST00000480321 FNDC4Q9H6D8 234 aaPredicted RBP11.33□□□□□ -0.6
MCF2L-225ENST00000480321 DIDO1Q9BTC0 2240 aaKnown RBP11.32□□□□□ -0.6
MCF2L-225ENST00000480321 RIPPLY3P57055 190 aa11.32□□□□□ -0.6
MCF2L-225ENST00000480321 Q6ZS49 121 aa11.32□□□□□ -0.6
MCF2L-225ENST00000480321 SPAG8Q99932 426 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-225ENST00000480321 LCTP09848 1927 aa11.32□□□□□ -0.6
MCF2L-225ENST00000480321 CFHR1Q03591 330 aa11.32□□□□□ -0.6
MCF2L-225ENST00000480321 GLRX5Q86SX6 157 aa11.32□□□□□ -0.6
MCF2L-225ENST00000480321 IGKV1D-8A0A087WSZ0 117 aa11.32□□□□□ -0.6
MCF2L-225ENST00000480321 OR9G9P0C7N8 305 aa11.32□□□□□ -0.6
MCF2L-225ENST00000480321 AMBPP02760 352 aa11.32□□□□□ -0.6
MCF2L-225ENST00000480321 GATA2P23769 480 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-225ENST00000480321 C1orf194Q5T5A4 169 aa11.32□□□□□ -0.6
MCF2L-225ENST00000480321 GVINP1Q7Z2Y8 2422 aa11.32□□□□□ -0.6
MCF2L-225ENST00000480321 CFPP27918 469 aa11.32□□□□□ -0.6
MCF2L-225ENST00000480321 NMSQ5H8A3 153 aa11.32□□□□□ -0.6
MCF2L-225ENST00000480321 SLC25A48Q6ZT89 311 aaKnown RBP11.32□□□□□ -0.6
MCF2L-225ENST00000480321 LINC01587Q99440 93 aa11.32□□□□□ -0.6
MCF2L-225ENST00000480321 IGHV3OR16-8A0A075B7F1 116 aa11.31□□□□□ -0.6
MCF2L-225ENST00000480321 IGHV3-11P01762 117 aa11.31□□□□□ -0.6
MCF2L-225ENST00000480321 CFAP161Q6P656 301 aa11.31□□□□□ -0.6
MCF2L-225ENST00000480321 TREML4Q6UXN2 200 aa11.31□□□□□ -0.6
MCF2L-225ENST00000480321 ANAPC13Q9BS18 74 aa11.31□□□□□ -0.6
MCF2L-225ENST00000480321 PEMTQ9UBM1 199 aa11.31□□□□□ -0.6
MCF2L-225ENST00000480321 ABCA4P78363 2273 aa11.31□□□□□ -0.6
MCF2L-225ENST00000480321 TRAV21A0A0B4J279 112 aa11.31□□□□□ -0.6
MCF2L-225ENST00000480321 NABP1Q96AH0 204 aa11.31□□□□□ -0.6
MCF2L-225ENST00000480321 AHCTF1Q8WYP5 2266 aa11.31□□□□□ -0.6
MCF2L-225ENST00000480321 DOCK4Q8N1I0 1966 aa11.31□□□□□ -0.6
MCF2L-225ENST00000480321 RBMY1BA6NDE4 496 aaKnown RBP11.31□□□□□ -0.6
MCF2L-225ENST00000480321 RBMY1EA6NEQ0 496 aaKnown RBP11.31□□□□□ -0.6
MCF2L-225ENST00000480321 CD55P08174 381 aa11.31□□□□□ -0.6
MCF2L-225ENST00000480321 RBMY1DP0C7P1 496 aaKnown RBP11.31□□□□□ -0.6
MCF2L-225ENST00000480321 RBMY1A1P0DJD3 496 aaKnown RBP11.31□□□□□ -0.6
MCF2L-225ENST00000480321 RBMY1CP0DJD4 496 aa11.31□□□□□ -0.6
MCF2L-225ENST00000480321 MYOD1P15172 320 aa11.31□□□□□ -0.6
MCF2L-225ENST00000480321 CSRP1P21291 193 aaKnown RBP11.31□□□□□ -0.6
MCF2L-225ENST00000480321 ACTL10Q5JWF8 245 aa11.31□□□□□ -0.6
MCF2L-225ENST00000480321 UBE2DNLQ8IWF7 75 aa11.31□□□□□ -0.6
MCF2L-225ENST00000480321 CXCL1P09341 107 aa11.31□□□□□ -0.6
MCF2L-225ENST00000480321 ERVK11-1P61568 191 aa11.31□□□□□ -0.6
MCF2L-225ENST00000480321 GGTLC1Q9BX51 225 aa11.31□□□□□ -0.6
MCF2L-225ENST00000480321 MDC1Q14676 2089 aaKnown RBP11.3□□□□□ -0.6
MCF2L-225ENST00000480321 A0A087WV48 116 aa11.3□□□□□ -0.6
MCF2L-225ENST00000480321 GNG5P63218 68 aa11.3□□□□□ -0.6
MCF2L-225ENST00000480321 DEFB121Q5J5C9 76 aa11.3□□□□□ -0.6
MCF2L-225ENST00000480321 TMEM14EPQ6UXP3 125 aa11.3□□□□□ -0.6
MCF2L-225ENST00000480321 COLCA1Q6ZS62 124 aa11.3□□□□□ -0.6
MCF2L-225ENST00000480321 C11orf44Q8N8P7 122 aa11.3□□□□□ -0.6
MCF2L-225ENST00000480321 DUSP14O95147 198 aaKnown RBP11.3□□□□□ -0.6
MCF2L-225ENST00000480321 CRIPAKQ8N1N5 446 aa11.3□□□□□ -0.6
MCF2L-225ENST00000480321 COQ2Q96H96 371 aa11.3□□□□□ -0.6
MCF2L-225ENST00000480321 CYSLTR1Q9Y271 337 aa11.3□□□□□ -0.6
MCF2L-225ENST00000480321 IGKV1-12A0A0C4DH73 117 aa11.3□□□□□ -0.6
MCF2L-225ENST00000480321 IGKV1D-12P01611 117 aa11.3□□□□□ -0.6
MCF2L-225ENST00000480321 NPFFR1Q9GZQ6 430 aa11.3□□□□□ -0.6
MCF2L-225ENST00000480321 IGHV4-39P01824 125 aa11.3□□□□□ -0.6
MCF2L-225ENST00000480321 IGKCP01834 107 aa11.3□□□□□ -0.6
MCF2L-225ENST00000480321 IFI27P40305 119 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-225ENST00000480321 VDAC2P45880 294 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-225ENST00000480321 RNF5Q99942 180 aa11.3□□□□□ -0.6
MCF2L-225ENST00000480321 C11orf68Q9H3H3 251 aaKnown RBP11.3□□□□□ -0.6
MCF2L-225ENST00000480321 CCL3L1P16619 93 aa11.29□□□□□ -0.6
MCF2L-225ENST00000480321 MALP21145 153 aa11.29□□□□□ -0.6
MCF2L-225ENST00000480321 CHD5Q8TDI0 1954 aa11.29□□□□□ -0.6
MCF2L-225ENST00000480321 SPTBN1Q01082 2364 aaKnown RBP11.29□□□□□ -0.6
MCF2L-225ENST00000480321 MST1P26927 711 aa11.29□□□□□ -0.6
MCF2L-225ENST00000480321 CNTFRP26992 372 aa11.29□□□□□ -0.6
MCF2L-225ENST00000480321 VSIRQ9H7M9 311 aa11.29□□□□□ -0.6
MCF2L-225ENST00000480321 NHP2Q9NX24 153 aaKnown RBP11.29□□□□□ -0.6
MCF2L-225ENST00000480321 RNASE4P34096 147 aaKnown RBP11.29□□□□□ -0.6
MCF2L-225ENST00000480321 FNDC10F2Z333 226 aa11.29□□□□□ -0.6
MCF2L-225ENST00000480321 LINC01551Q86U37 167 aa11.29□□□□□ -0.6
MCF2L-225ENST00000480321 SSBP4Q9BWG4 385 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-225ENST00000480321 SCN8AQ9UQD0 1980 aa11.29□□□□□ -0.6
MCF2L-225ENST00000480321 HOXA3O43365 443 aaPredicted RBP11.28□□□□□ -0.6
MCF2L-225ENST00000480321 TRBV7-9A0A0J9YWB2 115 aa11.28□□□□□ -0.6
MCF2L-225ENST00000480321 OVOL1O14753 267 aa11.28□□□□□ -0.6
MCF2L-225ENST00000480321 QRFPP83859 136 aa11.28□□□□□ -0.6
MCF2L-225ENST00000480321 ZFP36L1Q07352 338 aaKnown RBP11.28□□□□□ -0.6
MCF2L-225ENST00000480321 TMEM42Q69YG0 159 aa11.28□□□□□ -0.6
MCF2L-225ENST00000480321 IFI27L1Q96BM0 104 aa11.28□□□□□ -0.6
MCF2L-225ENST00000480321 SCN2AQ99250 2005 aa11.28□□□□□ -0.6
MCF2L-225ENST00000480321 MRPL27Q9P0M9 148 aaKnown RBP11.28□□□□□ -0.6
MCF2L-225ENST00000480321 PRB3Q04118 309 aaPredicted RBP11.28□□□□□ -0.6
MCF2L-225ENST00000480321 SFTA2Q6UW10 78 aa11.28□□□□□ -0.6
MCF2L-225ENST00000480321 VGLL1Q99990 258 aa11.28□□□□□ -0.6
MCF2L-225ENST00000480321 PYYP10082 97 aa11.28□□□□□ -0.6
MCF2L-225ENST00000480321 ZNF585BQ52M93 769 aa11.28□□□□□ -0.6
MCF2L-225ENST00000480321 JMJD8Q96S16 334 aa11.28□□□□□ -0.6
MCF2L-225ENST00000480321 SIGMAR1Q99720 223 aa11.28□□□□□ -0.6
MCF2L-225ENST00000480321 LY6DQ14210 128 aa11.28□□□□□ -0.6
MCF2L-225ENST00000480321 ZNF124Q15973 351 aa11.28□□□□□ -0.6
MCF2L-225ENST00000480321 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.27□□□□□ -0.6
MCF2L-225ENST00000480321 SRRM5B3KS81 715 aa11.27□□□□□ -0.6
MCF2L-225ENST00000480321 RPUSD1Q9UJJ7 312 aaKnown RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms