RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 STX12Q86Y82 276 aa8.67□□□□□ -1.02
SRRT-211ENST00000478693 LILRB2Q8N423 598 aa8.67□□□□□ -1.02
SRRT-211ENST00000478693 TMEM116Q8NCL8 245 aa8.67□□□□□ -1.02
SRRT-211ENST00000478693 GINS3Q9BRX5 216 aa8.67□□□□□ -1.02
SRRT-211ENST00000478693 DAZ1Q9NQZ3 744 aaKnown RBP8.67□□□□□ -1.02
SRRT-211ENST00000478693 TMEM213A2RRL7 107 aa8.66□□□□□ -1.02
SRRT-211ENST00000478693 FAM24AA6NFZ4 105 aa8.66□□□□□ -1.02
SRRT-211ENST00000478693 DEDDO75618 318 aa8.66□□□□□ -1.02
SRRT-211ENST00000478693 CCNKO75909 580 aa8.66□□□□□ -1.02
SRRT-211ENST00000478693 SCAF4O95104 1147 aaKnown RBP8.66□□□□□ -1.02
SRRT-211ENST00000478693 PRB2P02812 416 aaPredicted RBP8.66□□□□□ -1.02
SRRT-211ENST00000478693 FABP1P07148 127 aa8.66□□□□□ -1.02
SRRT-211ENST00000478693 FOLR2P14207 255 aa8.66□□□□□ -1.02
SRRT-211ENST00000478693 EDN2P20800 178 aa8.66□□□□□ -1.02
SRRT-211ENST00000478693 DEFA6Q01524 100 aa8.66□□□□□ -1.02
SRRT-211ENST00000478693 GAMTQ14353 236 aa8.66□□□□□ -1.02
SRRT-211ENST00000478693 FCN2Q15485 313 aa8.66□□□□□ -1.02
SRRT-211ENST00000478693 LCN12Q6JVE5 192 aa8.66□□□□□ -1.02
SRRT-211ENST00000478693 BTNL8Q6UX41 500 aa8.66□□□□□ -1.02
SRRT-211ENST00000478693 TMEM14EPQ6UXP3 125 aa8.66□□□□□ -1.02
SRRT-211ENST00000478693 Q8WTZ3 238 aa8.66□□□□□ -1.02
SRRT-211ENST00000478693 PPP1R1CQ8WVI7 109 aa8.66□□□□□ -1.02
SRRT-211ENST00000478693 MARC2Q969Z3 335 aa8.66□□□□□ -1.02
SRRT-211ENST00000478693 E5RGE8 158 aa8.65□□□□□ -1.02
SRRT-211ENST00000478693 CBLN1P23435 193 aa8.65□□□□□ -1.02
SRRT-211ENST00000478693 BMI1P35226 326 aa8.65□□□□□ -1.02
SRRT-211ENST00000478693 ELLP55199 621 aaPredicted RBP8.65□□□□□ -1.02
SRRT-211ENST00000478693 DLK1P80370 383 aa8.65□□□□□ -1.02
SRRT-211ENST00000478693 TOMM20LQ6UXN7 152 aa8.65□□□□□ -1.02
SRRT-211ENST00000478693 TMEM217Q8N7C4 229 aa8.65□□□□□ -1.02
SRRT-211ENST00000478693 NARS2Q96I59 477 aaKnown RBP8.65□□□□□ -1.02
SRRT-211ENST00000478693 LYRM2Q9NU23 88 aaPredicted RBP8.65□□□□□ -1.02
SRRT-211ENST00000478693 SIGLEC8Q9NYZ4 499 aa8.65□□□□□ -1.02
SRRT-211ENST00000478693 MRPL27Q9P0M9 148 aaKnown RBP8.65□□□□□ -1.02
SRRT-211ENST00000478693 ZNF256Q9Y2P7 627 aaPredicted RBP8.65□□□□□ -1.02
SRRT-211ENST00000478693 SELENOKQ9Y6D0 94 aa8.65□□□□□ -1.02
SRRT-211ENST00000478693 TRRAPQ9Y4A5 3859 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 IGHV3-49A0A0A0MS15 119 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 TRAV14DV4A0A0A6YYC5 116 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 PRSS46E5RG02 174 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 K7EMT4 169 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 WIPF1O43516 503 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 CST7O76096 145 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 TOMM40O96008 361 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 IGKV1-17P01599 117 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 IGLV1-51P01701 117 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 IL4P05112 153 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 RD3LP0DJH9 198 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 CXCL3P19876 107 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 KRTAP10-11P60412 298 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 YPEL3P61236 119 aaPredicted RBP8.64□□□□□ -1.03
SRRT-211ENST00000478693 HBG1P69891 147 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 HBG2P69892 147 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 SLC38A11Q08AI6 406 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 EGFEM1PQ0D2K5 195 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 IL15RAQ13261 267 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 GUCA2BQ16661 112 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 KPRPQ5T749 579 aaPredicted RBP8.64□□□□□ -1.03
SRRT-211ENST00000478693 IL34Q6ZMJ4 242 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 OR2K2Q8NGT1 345 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 PRR25Q96S07 402 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 METTL26Q96S19 204 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 PBDC1Q9BVG4 233 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 SLC25A31Q9H0C2 315 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 ZFAND3Q9H8U3 227 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 AURKAIP1Q9NWT8 199 aaPredicted RBP8.64□□□□□ -1.03
SRRT-211ENST00000478693 TECRQ9NZ01 308 aaKnown RBP8.64□□□□□ -1.03
SRRT-211ENST00000478693 OR5AC2Q9NZP5 309 aa8.64□□□□□ -1.03
SRRT-211ENST00000478693 IGHV7-4-1A0A0J9YVY3 117 aa8.63□□□□□ -1.03
SRRT-211ENST00000478693 IGSF23A1L1A6 192 aa8.63□□□□□ -1.03
SRRT-211ENST00000478693 PMS2P5A8MQ11 134 aa8.63□□□□□ -1.03
SRRT-211ENST00000478693 MPC2O95563 127 aa8.63□□□□□ -1.03
SRRT-211ENST00000478693 GP9P14770 177 aa8.63□□□□□ -1.03
SRRT-211ENST00000478693 P2RY1P47900 373 aa8.63□□□□□ -1.03
SRRT-211ENST00000478693 SULT1A1P50225 295 aa8.63□□□□□ -1.03
SRRT-211ENST00000478693 LYZP61626 148 aa8.63□□□□□ -1.03
SRRT-211ENST00000478693 OR2F1Q13607 317 aa8.63□□□□□ -1.03
SRRT-211ENST00000478693 CD300EQ496F6 205 aaPredicted RBP8.63□□□□□ -1.03
SRRT-211ENST00000478693 RBPMS2Q6ZRY4 209 aaKnown RBP8.63□□□□□ -1.03
SRRT-211ENST00000478693 TMEM252Q8N6L7 170 aa8.63□□□□□ -1.03
SRRT-211ENST00000478693 OR11H7Q8NGC8 314 aa8.63□□□□□ -1.03
SRRT-211ENST00000478693 OR51G1Q8NGK1 321 aa8.63□□□□□ -1.03
SRRT-211ENST00000478693 THAP6Q8TBB0 222 aa8.63□□□□□ -1.03
SRRT-211ENST00000478693 WDR89Q96FK6 387 aaPredicted RBP8.63□□□□□ -1.03
SRRT-211ENST00000478693 TRGV9Q99603 122 aa8.63□□□□□ -1.03
SRRT-211ENST00000478693 TMEM231Q9H6L2 316 aa8.63□□□□□ -1.03
SRRT-211ENST00000478693 MLXQ9UH92 298 aa8.63□□□□□ -1.03
SRRT-211ENST00000478693 IGHV3OR16-13A0A075B7E8 117 aa8.62□□□□□ -1.03
SRRT-211ENST00000478693 IGHV3-74A0A0B4J1X5 117 aa8.62□□□□□ -1.03
SRRT-211ENST00000478693 IGHV3-66A0A0C4DH42 116 aa8.62□□□□□ -1.03
SRRT-211ENST00000478693 UBE2L5PA0A1B0GUS4 154 aa8.62□□□□□ -1.03
SRRT-211ENST00000478693 HNRNPCP07910 306 aaKnown RBP eCLIP8.62□□□□□ -1.03
SRRT-211ENST00000478693 PSG1P11464 419 aa8.62□□□□□ -1.03
SRRT-211ENST00000478693 NPPCP23582 126 aa8.62□□□□□ -1.03
SRRT-211ENST00000478693 EWSR1Q01844 656 aaKnown RBP eCLIP8.62□□□□□ -1.03
SRRT-211ENST00000478693 ZNF90Q03938 601 aa8.62□□□□□ -1.03
SRRT-211ENST00000478693 ARL16Q0P5N6 197 aa8.62□□□□□ -1.03
SRRT-211ENST00000478693 DEFB114Q30KQ6 69 aa8.62□□□□□ -1.03
SRRT-211ENST00000478693 LAMTOR1Q6IAA8 161 aa8.62□□□□□ -1.03
SRRT-211ENST00000478693 ADAMTSL5Q6ZMM2 481 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms