RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 IL22RA2Q969J5 263 aa10.59□□□□□ -0.71
SMARCE1-209ENST00000478349 NAA50Q9GZZ1 169 aaKnown RBP10.59□□□□□ -0.71
SMARCE1-209ENST00000478349 FNDC4Q9H6D8 234 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-209ENST00000478349 CACNG5Q9UF02 275 aa10.59□□□□□ -0.71
SMARCE1-209ENST00000478349 SCP2D1Q9UJQ7 156 aa10.59□□□□□ -0.71
SMARCE1-209ENST00000478349 K7EQG2 157 aa10.58□□□□□ -0.72
SMARCE1-209ENST00000478349 CTDSPLO15194 276 aa10.58□□□□□ -0.72
SMARCE1-209ENST00000478349 HNRNPCP07910 306 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMARCE1-209ENST00000478349 MIFP14174 115 aa10.58□□□□□ -0.72
SMARCE1-209ENST00000478349 NPY1RP25929 384 aa10.58□□□□□ -0.72
SMARCE1-209ENST00000478349 OR10J1P30954 320 aa10.58□□□□□ -0.72
SMARCE1-209ENST00000478349 RND2P52198 227 aa10.58□□□□□ -0.72
SMARCE1-209ENST00000478349 YPEL3P61236 119 aaPredicted RBP10.58□□□□□ -0.72
SMARCE1-209ENST00000478349 NUTF2P61970 127 aaKnown RBP10.58□□□□□ -0.72
SMARCE1-209ENST00000478349 SRPXP78539 464 aa10.58□□□□□ -0.72
SMARCE1-209ENST00000478349 TMEM268Q5VZI3 342 aa10.58□□□□□ -0.72
SMARCE1-209ENST00000478349 C2CD4CQ8TF44 421 aa10.58□□□□□ -0.72
SMARCE1-209ENST00000478349 GLYATL2Q8WU03 294 aa10.58□□□□□ -0.72
SMARCE1-209ENST00000478349 BCL7BQ9BQE9 202 aa10.58□□□□□ -0.72
SMARCE1-209ENST00000478349 HRH4Q9H3N8 390 aa10.58□□□□□ -0.72
SMARCE1-209ENST00000478349 A0A0G2JRQ6 117 aa10.57□□□□□ -0.72
SMARCE1-209ENST00000478349 CRYM-AS1A6NIL9 109 aa10.57□□□□□ -0.72
SMARCE1-209ENST00000478349 IGKV1-17P01599 117 aa10.57□□□□□ -0.72
SMARCE1-209ENST00000478349 ZNF688P0C7X2 276 aa10.57□□□□□ -0.72
SMARCE1-209ENST00000478349 SMIM18P0DKX4 95 aa10.57□□□□□ -0.72
SMARCE1-209ENST00000478349 SULT1A3P0DMM9 295 aa10.57□□□□□ -0.72
SMARCE1-209ENST00000478349 SULT1A4P0DMN0 295 aa10.57□□□□□ -0.72
SMARCE1-209ENST00000478349 ANXA3P12429 323 aa10.57□□□□□ -0.72
SMARCE1-209ENST00000478349 NANOS2P60321 138 aaKnown RBP10.57□□□□□ -0.72
SMARCE1-209ENST00000478349 DHRS2Q13268 280 aa10.57□□□□□ -0.72
SMARCE1-209ENST00000478349 TIGITQ495A1 244 aa10.57□□□□□ -0.72
SMARCE1-209ENST00000478349 TRPT1Q86TN4 253 aaKnown RBP10.57□□□□□ -0.72
SMARCE1-209ENST00000478349 CLVS1Q8IUQ0 354 aaPredicted RBP10.57□□□□□ -0.72
SMARCE1-209ENST00000478349 RAB2BQ8WUD1 216 aa10.57□□□□□ -0.72
SMARCE1-209ENST00000478349 DIRAS2Q96HU8 199 aa10.57□□□□□ -0.72
SMARCE1-209ENST00000478349 C1QTNF4Q9BXJ3 329 aa10.57□□□□□ -0.72
SMARCE1-209ENST00000478349 CCDC59Q9P031 241 aaKnown RBP10.57□□□□□ -0.72
SMARCE1-209ENST00000478349 RSL24D1Q9UHA3 163 aaKnown RBP10.57□□□□□ -0.72
SMARCE1-209ENST00000478349 ALMS1Q8TCU4 4167 aa10.57□□□□□ -0.72
SMARCE1-209ENST00000478349 FABP1P07148 127 aa10.56□□□□□ -0.72
SMARCE1-209ENST00000478349 IGLC1P0CG04 106 aa10.56□□□□□ -0.72
SMARCE1-209ENST00000478349 FAUP35544 74 aaKnown RBP10.56□□□□□ -0.72
SMARCE1-209ENST00000478349 ATP5IP56385 69 aaPredicted RBP10.56□□□□□ -0.72
SMARCE1-209ENST00000478349 FAAP20Q6NZ36 180 aa10.56□□□□□ -0.72
SMARCE1-209ENST00000478349 PRSS54Q6PEW0 395 aa10.56□□□□□ -0.72
SMARCE1-209ENST00000478349 SELENOHQ8IZQ5 122 aaKnown RBP10.56□□□□□ -0.72
SMARCE1-209ENST00000478349 LILRB2Q8N423 598 aa10.56□□□□□ -0.72
SMARCE1-209ENST00000478349 OR4C16Q8NGL9 310 aa10.56□□□□□ -0.72
SMARCE1-209ENST00000478349 RTBDNQ9BSG5 229 aaPredicted RBP10.56□□□□□ -0.72
SMARCE1-209ENST00000478349 MIXL1Q9H2W2 232 aa10.56□□□□□ -0.72
SMARCE1-209ENST00000478349 SEPSECSQ9HD40 501 aaKnown RBP10.56□□□□□ -0.72
SMARCE1-209ENST00000478349 TMEM56-RWDD3S4R434 201 aa10.56□□□□□ -0.72
SMARCE1-209ENST00000478349 U3KQ87 197 aa10.56□□□□□ -0.72
SMARCE1-209ENST00000478349 IFNA10P01566 189 aa10.55□□□□□ -0.72
SMARCE1-209ENST00000478349 IL4P05112 153 aa10.55□□□□□ -0.72
SMARCE1-209ENST00000478349 CCR6P51684 374 aa10.55□□□□□ -0.72
SMARCE1-209ENST00000478349 ACTL10Q5JWF8 245 aa10.55□□□□□ -0.72
SMARCE1-209ENST00000478349 Q6ZRM9 215 aa10.55□□□□□ -0.72
SMARCE1-209ENST00000478349 OR51S1Q8NGJ8 323 aa10.55□□□□□ -0.72
SMARCE1-209ENST00000478349 DCANP1Q8TF63 244 aa10.55□□□□□ -0.72
SMARCE1-209ENST00000478349 GPR146Q96CH1 333 aa10.55□□□□□ -0.72
SMARCE1-209ENST00000478349 MRPL36Q9P0J6 103 aaKnown RBP10.55□□□□□ -0.72
SMARCE1-209ENST00000478349 GPR132Q9UNW8 380 aa10.55□□□□□ -0.72
SMARCE1-209ENST00000478349 A0A0B4J2A0 478 aa10.54□□□□□ -0.72
SMARCE1-209ENST00000478349 CTDSP2O14595 271 aa10.54□□□□□ -0.72
SMARCE1-209ENST00000478349 TOMM40O96008 361 aa10.54□□□□□ -0.72
SMARCE1-209ENST00000478349 RD3LP0DJH9 198 aa10.54□□□□□ -0.72
SMARCE1-209ENST00000478349 PRR20EP86478 221 aa10.54□□□□□ -0.72
SMARCE1-209ENST00000478349 PRR20CP86479 221 aa10.54□□□□□ -0.72
SMARCE1-209ENST00000478349 PRR20DP86480 221 aa10.54□□□□□ -0.72
SMARCE1-209ENST00000478349 PRR20BP86481 221 aa10.54□□□□□ -0.72
SMARCE1-209ENST00000478349 PRR20AP86496 221 aa10.54□□□□□ -0.72
SMARCE1-209ENST00000478349 PSMG4Q5JS54 123 aa10.54□□□□□ -0.72
SMARCE1-209ENST00000478349 C16orf54Q6UWD8 224 aa10.54□□□□□ -0.72
SMARCE1-209ENST00000478349 FAM24BQ8N5W8 94 aa10.54□□□□□ -0.72
SMARCE1-209ENST00000478349 LHFPL5Q8TAF8 219 aa10.54□□□□□ -0.72
SMARCE1-209ENST00000478349 ACY3Q96HD9 319 aa10.54□□□□□ -0.72
SMARCE1-209ENST00000478349 NRN1Q9NPD7 142 aa10.54□□□□□ -0.72
SMARCE1-209ENST00000478349 MCUBQ9NWR8 336 aa10.54□□□□□ -0.72
SMARCE1-209ENST00000478349 SHPKQ9UHJ6 478 aa10.54□□□□□ -0.72
SMARCE1-209ENST00000478349 TBC1D24Q9ULP9 559 aa10.54□□□□□ -0.72
SMARCE1-209ENST00000478349 IGHV4-28A0A0C4DH34 117 aa10.53□□□□□ -0.72
SMARCE1-209ENST00000478349 ALDH3B2P48448 385 aa10.53□□□□□ -0.72
SMARCE1-209ENST00000478349 TMBIM6P55061 237 aa10.53□□□□□ -0.72
SMARCE1-209ENST00000478349 AP3S2P59780 193 aa10.53□□□□□ -0.72
SMARCE1-209ENST00000478349 SMCO1Q147U7 214 aa10.53□□□□□ -0.72
SMARCE1-209ENST00000478349 SPCS2Q15005 226 aa10.53□□□□□ -0.72
SMARCE1-209ENST00000478349 MLANAQ16655 118 aa10.53□□□□□ -0.72
SMARCE1-209ENST00000478349 NMSQ5H8A3 153 aa10.53□□□□□ -0.72
SMARCE1-209ENST00000478349 OR8G2PQ6IF36 304 aa10.53□□□□□ -0.72
SMARCE1-209ENST00000478349 SIGLEC15Q6ZMC9 328 aa10.53□□□□□ -0.72
SMARCE1-209ENST00000478349 LGI3Q8N145 548 aa10.53□□□□□ -0.72
SMARCE1-209ENST00000478349 Q8NAQ8 132 aa10.53□□□□□ -0.72
SMARCE1-209ENST00000478349 DTD1Q8TEA8 209 aa10.53□□□□□ -0.72
SMARCE1-209ENST00000478349 GLMPQ8WWB7 406 aa10.53□□□□□ -0.72
SMARCE1-209ENST00000478349 NPIPB3Q92617 1050 aa10.53□□□□□ -0.72
SMARCE1-209ENST00000478349 U3KQE9 123 aa10.53□□□□□ -0.72
SMARCE1-209ENST00000478349 EPPK1P58107 5090 aaKnown RBP10.52□□□□□ -0.72
SMARCE1-209ENST00000478349 TRAV10A0A0B4J240 114 aa10.52□□□□□ -0.73
SMARCE1-209ENST00000478349 ANKRD20A5PA0PJZ0 165 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms