RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 RAB11AP62491 216 aa10.33□□□□□ -0.76
SOX2-OT-208ENST00000477928 TOMM20LQ6UXN7 152 aa10.33□□□□□ -0.76
SOX2-OT-208ENST00000477928 LYG2Q86SG7 212 aa10.33□□□□□ -0.76
SOX2-OT-208ENST00000477928 RHPN1-AS1Q9BWJ2 59 aa10.33□□□□□ -0.76
SOX2-OT-208ENST00000477928 RBKSQ9H477 322 aa10.33□□□□□ -0.76
SOX2-OT-208ENST00000477928 VSIRQ9H7M9 311 aa10.33□□□□□ -0.76
SOX2-OT-208ENST00000477928 PUS1Q9Y606 427 aaKnown RBP eCLIP10.33□□□□□ -0.76
SOX2-OT-208ENST00000477928 TRAV2A0A0B4J234 112 aa10.32□□□□□ -0.76
SOX2-OT-208ENST00000477928 LYRM1O43325 122 aa10.32□□□□□ -0.76
SOX2-OT-208ENST00000477928 IFNA21P01568 189 aa10.32□□□□□ -0.76
SOX2-OT-208ENST00000477928 PAFAH1B2P68402 229 aa10.32□□□□□ -0.76
SOX2-OT-208ENST00000477928 DHRS2Q13268 280 aa10.32□□□□□ -0.76
SOX2-OT-208ENST00000477928 PRSS54Q6PEW0 395 aa10.32□□□□□ -0.76
SOX2-OT-208ENST00000477928 NARS2Q96I59 477 aaKnown RBP10.32□□□□□ -0.76
SOX2-OT-208ENST00000477928 METTL26Q96S19 204 aa10.32□□□□□ -0.76
SOX2-OT-208ENST00000477928 ZFAND3Q9H8U3 227 aa10.32□□□□□ -0.76
SOX2-OT-208ENST00000477928 BATF3Q9NR55 127 aa10.32□□□□□ -0.76
SOX2-OT-208ENST00000477928 IGKV1-17P01599 117 aa10.31□□□□□ -0.76
SOX2-OT-208ENST00000477928 IGLC1P0CG04 106 aa10.31□□□□□ -0.76
SOX2-OT-208ENST00000477928 NPPCP23582 126 aa10.31□□□□□ -0.76
SOX2-OT-208ENST00000477928 GGNBP1Q5YKI7 109 aa10.31□□□□□ -0.76
SOX2-OT-208ENST00000477928 FAM90A2PQ658T7 463 aa10.31□□□□□ -0.76
SOX2-OT-208ENST00000477928 MUC7Q8TAX7 377 aa10.31□□□□□ -0.76
SOX2-OT-208ENST00000477928 Q8WTZ3 238 aa10.31□□□□□ -0.76
SOX2-OT-208ENST00000477928 TMEM170AQ8WVE7 144 aa10.31□□□□□ -0.76
SOX2-OT-208ENST00000477928 CITED4Q96RK1 184 aa10.31□□□□□ -0.76
SOX2-OT-208ENST00000477928 WDR12Q9GZL7 423 aaKnown RBP10.31□□□□□ -0.76
SOX2-OT-208ENST00000477928 SRD5A3Q9H8P0 318 aa10.31□□□□□ -0.76
SOX2-OT-208ENST00000477928 PTTG2Q9NZH5 202 aa10.31□□□□□ -0.76
SOX2-OT-208ENST00000477928 IGHV3-49A0A0A0MS15 119 aa10.3□□□□□ -0.76
SOX2-OT-208ENST00000477928 PLA2G10O15496 165 aa10.3□□□□□ -0.76
SOX2-OT-208ENST00000477928 SYNGR2O43760 224 aa10.3□□□□□ -0.76
SOX2-OT-208ENST00000477928 IFNA4P05014 189 aa10.3□□□□□ -0.76
SOX2-OT-208ENST00000477928 FABP1P07148 127 aa10.3□□□□□ -0.76
SOX2-OT-208ENST00000477928 CRYBB3P26998 211 aa10.3□□□□□ -0.76
SOX2-OT-208ENST00000477928 OR10J1P30954 320 aa10.3□□□□□ -0.76
SOX2-OT-208ENST00000477928 NUP62P37198 522 aaPredicted RBP10.3□□□□□ -0.76
SOX2-OT-208ENST00000477928 RND2P52198 227 aa10.3□□□□□ -0.76
SOX2-OT-208ENST00000477928 ID3Q02535 119 aa10.3□□□□□ -0.76
SOX2-OT-208ENST00000477928 C4orf46Q504U0 113 aa10.3□□□□□ -0.76
SOX2-OT-208ENST00000477928 DMRTA1Q5VZB9 504 aa10.3□□□□□ -0.76
SOX2-OT-208ENST00000477928 ZFAND6Q6FIF0 208 aa10.3□□□□□ -0.76
SOX2-OT-208ENST00000477928 MITD1Q8WV92 249 aa10.3□□□□□ -0.76
SOX2-OT-208ENST00000477928 RNF2Q99496 336 aa10.3□□□□□ -0.76
SOX2-OT-208ENST00000477928 EDA2RQ9HAV5 297 aa10.3□□□□□ -0.76
SOX2-OT-208ENST00000477928 MRPL36Q9P0J6 103 aaKnown RBP10.3□□□□□ -0.76
SOX2-OT-208ENST00000477928 TENM2Q9NT68 2774 aa10.29□□□□□ -0.76
SOX2-OT-208ENST00000477928 TCRBP04435 133 aa10.29□□□□□ -0.76
SOX2-OT-208ENST00000477928 HOXB5P09067 269 aa10.29□□□□□ -0.76
SOX2-OT-208ENST00000477928 EIF2B2P49770 351 aaKnown RBP10.29□□□□□ -0.76
SOX2-OT-208ENST00000477928 MLANAQ16655 118 aa10.29□□□□□ -0.76
SOX2-OT-208ENST00000477928 MZT2BQ6NZ67 158 aa10.29□□□□□ -0.76
SOX2-OT-208ENST00000477928 GRAMD2BQ96HH9 432 aa10.29□□□□□ -0.76
SOX2-OT-208ENST00000477928 SLC35E1Q96K37 410 aa10.29□□□□□ -0.76
SOX2-OT-208ENST00000477928 C20orf85Q9H1P6 137 aa10.29□□□□□ -0.76
SOX2-OT-208ENST00000477928 PFDN2Q9UHV9 154 aa10.29□□□□□ -0.76
SOX2-OT-208ENST00000477928 FLVCR2Q9UPI3 526 aa10.29□□□□□ -0.76
SOX2-OT-208ENST00000477928 IGHV3OR16-13A0A075B7E8 117 aa10.28□□□□□ -0.76
SOX2-OT-208ENST00000477928 LOC102724200A0A096LPH7 203 aaPredicted RBP10.28□□□□□ -0.76
SOX2-OT-208ENST00000477928 IGHV3-74A0A0B4J1X5 117 aa10.28□□□□□ -0.76
SOX2-OT-208ENST00000477928 LINC00854A0A1B0GVQ3 168 aa10.28□□□□□ -0.76
SOX2-OT-208ENST00000477928 C3orf84H3BNL1 204 aa10.28□□□□□ -0.76
SOX2-OT-208ENST00000477928 DFFBO76075 338 aa10.28□□□□□ -0.76
SOX2-OT-208ENST00000477928 NXPH3O95157 252 aa10.28□□□□□ -0.76
SOX2-OT-208ENST00000477928 TOMM40O96008 361 aa10.28□□□□□ -0.76
SOX2-OT-208ENST00000477928 CFDP00746 253 aaPredicted RBP10.28□□□□□ -0.76
SOX2-OT-208ENST00000477928 AP2S1P53680 142 aaPredicted RBP10.28□□□□□ -0.76
SOX2-OT-208ENST00000477928 ZNF846Q147U1 533 aa10.28□□□□□ -0.76
SOX2-OT-208ENST00000477928 CASC10Q5T4H9 136 aa10.28□□□□□ -0.76
SOX2-OT-208ENST00000477928 NPIPB3Q92617 1050 aa10.28□□□□□ -0.76
SOX2-OT-208ENST00000477928 GGTLC1Q9BX51 225 aa10.28□□□□□ -0.76
SOX2-OT-208ENST00000477928 UBQLN2Q9UHD9 624 aa10.28□□□□□ -0.76
SOX2-OT-208ENST00000477928 KIR2DL5BA0A0G2JN68 375 aa10.27□□□□□ -0.77
SOX2-OT-208ENST00000477928 KIR2DL5BA0A0G2JPC4 375 aa10.27□□□□□ -0.77
SOX2-OT-208ENST00000477928 UBE2CO00762 179 aa10.27□□□□□ -0.77
SOX2-OT-208ENST00000477928 HNRNPCP07910 306 aaKnown RBP eCLIP10.27□□□□□ -0.77
SOX2-OT-208ENST00000477928 RD3LP0DJH9 198 aa10.27□□□□□ -0.77
SOX2-OT-208ENST00000477928 ANXA7P20073 488 aaKnown RBP10.27□□□□□ -0.77
SOX2-OT-208ENST00000477928 NKX2-1P43699 371 aaPredicted RBP10.27□□□□□ -0.77
SOX2-OT-208ENST00000477928 TIGITQ495A1 244 aa10.27□□□□□ -0.77
SOX2-OT-208ENST00000477928 KIR2DL5AQ8N109 375 aa10.27□□□□□ -0.77
SOX2-OT-208ENST00000477928 OR4D5Q8NGN0 318 aa10.27□□□□□ -0.77
SOX2-OT-208ENST00000477928 KIR2DL5BQ8NHK3 375 aa10.27□□□□□ -0.77
SOX2-OT-208ENST00000477928 ST8SIA2Q92186 375 aa10.27□□□□□ -0.77
SOX2-OT-208ENST00000477928 U3KQE9 123 aa10.27□□□□□ -0.77
SOX2-OT-208ENST00000477928 HELTA6NFD8 242 aa10.26□□□□□ -0.77
SOX2-OT-208ENST00000477928 WRBO00258 174 aa10.26□□□□□ -0.77
SOX2-OT-208ENST00000477928 S100A7P31151 101 aa10.26□□□□□ -0.77
SOX2-OT-208ENST00000477928 APOC4P55056 127 aa10.26□□□□□ -0.77
SOX2-OT-208ENST00000477928 TAS2R30P59541 319 aa10.26□□□□□ -0.77
SOX2-OT-208ENST00000477928 ASAH1Q13510 395 aa10.26□□□□□ -0.77
SOX2-OT-208ENST00000477928 GAMTQ14353 236 aa10.26□□□□□ -0.77
SOX2-OT-208ENST00000477928 OR8G2PQ6IF36 304 aa10.26□□□□□ -0.77
SOX2-OT-208ENST00000477928 TCF24Q7RTU0 167 aa10.26□□□□□ -0.77
SOX2-OT-208ENST00000477928 OR51G1Q8NGK1 321 aa10.26□□□□□ -0.77
SOX2-OT-208ENST00000477928 ACY3Q96HD9 319 aa10.26□□□□□ -0.77
SOX2-OT-208ENST00000477928 RAB40CQ96S21 281 aa10.26□□□□□ -0.77
SOX2-OT-208ENST00000477928 SEPSECSQ9HD40 501 aaKnown RBP10.26□□□□□ -0.77
SOX2-OT-208ENST00000477928 STRAPQ9Y3F4 350 aaKnown RBP10.26□□□□□ -0.77
SOX2-OT-208ENST00000477928 STARD9Q9P2P6 4700 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms