RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 HINT2Q9BX68 163 aa7.25□□□□□ -1.25
SMARCB1-206ENST00000477836 ZC4H2Q9NQZ6 224 aa7.25□□□□□ -1.25
SMARCB1-206ENST00000477836 LOC102724200A0A096LPH7 203 aaPredicted RBP7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 MSGN1A6NI15 193 aa7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 H3BP45 60 aa7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 RTL8CO15255 209 aa7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 SPRY2O43597 315 aa7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 TSC22D2O75157 780 aa7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 CA2P00918 260 aa7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 TRGV3P03979 118 aa7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 MYOD1P15172 320 aa7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 C4BPBP20851 252 aa7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 RPL27AP46776 148 aaKnown RBP7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 TAS2R30P59541 319 aa7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 HSPE1P61604 102 aaKnown RBP7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 TMEM267Q0VDI3 215 aaPredicted RBP7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 ZNF345Q14585 488 aa7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 GUCA2BQ16661 112 aa7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 C10orf55Q5SWW7 151 aa7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 STX12Q86Y82 276 aa7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 OR2C3Q8N628 320 aa7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 OR1L8Q8NGR8 309 aa7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 RNF126Q9BV68 326 aa7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 MFFQ9GZY8 342 aa7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 SLA2Q9H6Q3 261 aa7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 HEYLQ9NQ87 328 aaPredicted RBP7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 LYRM2Q9NU23 88 aaPredicted RBP7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 HSPB11Q9Y547 144 aa7.24□□□□□ -1.25
SMARCB1-206ENST00000477836 TEX50A0A1B0GTY4 177 aa7.23□□□□□ -1.25
SMARCB1-206ENST00000477836 RNF222A6NCQ9 220 aa7.23□□□□□ -1.25
SMARCB1-206ENST00000477836 RPL12P30050 165 aaKnown RBP7.23□□□□□ -1.25
SMARCB1-206ENST00000477836 CRIP2P52943 208 aaPredicted RBP7.23□□□□□ -1.25
SMARCB1-206ENST00000477836 AP2S1P53680 142 aaPredicted RBP7.23□□□□□ -1.25
SMARCB1-206ENST00000477836 PJVKQ0ZLH3 352 aa7.23□□□□□ -1.25
SMARCB1-206ENST00000477836 OR2F1Q13607 317 aa7.23□□□□□ -1.25
SMARCB1-206ENST00000477836 UNQ5815/PRO19632Q6UWF5 114 aa7.23□□□□□ -1.25
SMARCB1-206ENST00000477836 ACOT7LQ6ZUV0 252 aa7.23□□□□□ -1.25
SMARCB1-206ENST00000477836 SLC24A4Q8NFF2 622 aa7.23□□□□□ -1.25
SMARCB1-206ENST00000477836 C2CD4CQ8TF44 421 aa7.23□□□□□ -1.25
SMARCB1-206ENST00000477836 AQP10Q96PS8 301 aa7.23□□□□□ -1.25
SMARCB1-206ENST00000477836 FAM103A1Q9BTL3 118 aaKnown RBP7.23□□□□□ -1.25
SMARCB1-206ENST00000477836 SLC25A31Q9H0C2 315 aa7.23□□□□□ -1.25
SMARCB1-206ENST00000477836 C11orf1Q9H5F2 150 aa7.23□□□□□ -1.25
SMARCB1-206ENST00000477836 PSENENQ9NZ42 101 aa7.23□□□□□ -1.25
SMARCB1-206ENST00000477836 FBXL17Q9UF56 701 aa7.23□□□□□ -1.25
SMARCB1-206ENST00000477836 DNAH5Q8TE73 4624 aa7.23□□□□□ -1.25
SMARCB1-206ENST00000477836 A0A0D9SG52 128 aa7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 KANTRA0A1W2PQU2 76 aa7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 IGSF23A1L1A6 192 aa7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 SCAF4O95104 1147 aaKnown RBP7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 TMEM50AO95807 157 aa7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 IFNA4P05014 189 aa7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 EGR2P11161 476 aaPredicted RBP7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 CXCL2P19875 107 aa7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 NPY1RP25929 384 aa7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 TCTAP57738 103 aa7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 RPP30P78346 268 aaKnown RBP7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 CX3CL1P78423 397 aa7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 BAXQ07812 192 aa7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 MRGPRG-AS1Q2M3A8 158 aa7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 DEFB135Q30KP9 77 aa7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 SPANXN5Q5MJ07 72 aa7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 HSD17B13Q7Z5P4 300 aaPredicted RBP7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 KCNRGQ8N5I3 272 aa7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 SRSF12Q8WXF0 261 aaKnown RBP7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 SMIM8Q96KF7 97 aa7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 SRSF8Q9BRL6 282 aaKnown RBP7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 NDUFA4L2Q9NRX3 87 aa7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 ZNF355PQ9NSJ1 428 aa7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 PEMTQ9UBM1 199 aa7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 PAIP2BQ9ULR5 123 aaKnown RBP7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 TP53TG1Q9Y2A0 90 aa7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 STRAPQ9Y3F4 350 aaKnown RBP7.22□□□□□ -1.25
SMARCB1-206ENST00000477836 FAM24AA6NFZ4 105 aa7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 INS-IGF2F8WCM5 200 aa7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 BCL2L11O43521 198 aa7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 CDK2AP2O75956 126 aa7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 IFNA10P01566 189 aa7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 S100A11P31949 105 aa7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 SULT1A1P50225 295 aa7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 PAX9P55771 341 aa7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 NANOS2P60321 138 aaKnown RBP7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 HBG1P69891 147 aa7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 HBG2P69892 147 aa7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 SSBP2P81877 361 aaPredicted RBP7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 ERHP84090 104 aaKnown RBP7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 FXYD3Q14802 87 aa7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 RBMY1FQ15415 496 aaKnown RBP7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 RPEL1Q2QD12 228 aa7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 TMUB2Q71RG4 321 aa7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 SLC16A13Q7RTY0 426 aa7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 Q8N1X5 172 aa7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 TMEM252Q8N6L7 170 aa7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 LFNGQ8NES3 379 aa7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 DYNLRB2Q8TF09 96 aa7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 ARL6Q9H0F7 186 aa7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 APLNQ9ULZ1 77 aa7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 DMBT1Q9UGM3 2413 aaPredicted RBP7.21□□□□□ -1.26
SMARCB1-206ENST00000477836 A0A0G2JLM5 398 aa7.2□□□□□ -1.26
SMARCB1-206ENST00000477836 A0A1B0GW64 132 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms