RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 ZNF253O75346 499 aa14.59□□□□□ -0.07
CCM2-209ENST00000477605 PATE2Q6UY27 113 aa14.59□□□□□ -0.07
CCM2-209ENST00000477605 ZCCHC24Q8N2G6 241 aaKnown RBP14.59□□□□□ -0.07
CCM2-209ENST00000477605 MRPL27Q9P0M9 148 aaKnown RBP14.59□□□□□ -0.07
CCM2-209ENST00000477605 KAAG1Q9UBP8 84 aa14.59□□□□□ -0.07
CCM2-209ENST00000477605 SSUH2Q9Y2M2 353 aa14.59□□□□□ -0.07
CCM2-209ENST00000477605 NBEAQ8NFP9 2946 aa14.59□□□□□ -0.07
CCM2-209ENST00000477605 E7EUB6 86 aa14.59□□□□□ -0.07
CCM2-209ENST00000477605 FSTL3O95633 263 aa14.59□□□□□ -0.07
CCM2-209ENST00000477605 CDKN1AP38936 164 aa14.59□□□□□ -0.07
CCM2-209ENST00000477605 COMPP49747 757 aaPredicted RBP14.59□□□□□ -0.07
CCM2-209ENST00000477605 ZNF705AQ6ZN79 300 aaPredicted RBP14.59□□□□□ -0.07
CCM2-209ENST00000477605 A0A1W2PS18 150 aa14.58□□□□□ -0.08
CCM2-209ENST00000477605 CRYGCP07315 174 aa14.58□□□□□ -0.08
CCM2-209ENST00000477605 MYCNOSP40205 109 aa14.58□□□□□ -0.08
CCM2-209ENST00000477605 TCL1AP56279 114 aa14.58□□□□□ -0.08
CCM2-209ENST00000477605 VN1R17PQ8TDU5 208 aa14.58□□□□□ -0.08
CCM2-209ENST00000477605 FXYD5Q96DB9 178 aa14.58□□□□□ -0.08
CCM2-209ENST00000477605 PERPQ96FX8 193 aa14.58□□□□□ -0.08
CCM2-209ENST00000477605 NRN1Q9NPD7 142 aa14.58□□□□□ -0.08
CCM2-209ENST00000477605 FBXL7Q9UJT9 491 aa14.58□□□□□ -0.08
CCM2-209ENST00000477605 TBL2Q9Y4P3 447 aaKnown RBP14.58□□□□□ -0.08
CCM2-209ENST00000477605 SPINK4O60575 86 aa14.57□□□□□ -0.08
CCM2-209ENST00000477605 ZNF324O75467 553 aaPredicted RBP14.57□□□□□ -0.08
CCM2-209ENST00000477605 CD33P20138 364 aa14.57□□□□□ -0.08
CCM2-209ENST00000477605 SRIP30626 198 aa14.57□□□□□ -0.08
CCM2-209ENST00000477605 REG1BP48304 166 aa14.57□□□□□ -0.08
CCM2-209ENST00000477605 DLX6P56179 175 aa14.57□□□□□ -0.08
CCM2-209ENST00000477605 TBR1Q16650 682 aa14.57□□□□□ -0.08
CCM2-209ENST00000477605 MRPL54Q6P161 138 aaKnown RBP14.57□□□□□ -0.08
CCM2-209ENST00000477605 C19orf35Q6ZS72 473 aa14.57□□□□□ -0.08
CCM2-209ENST00000477605 WFDC8Q8IUA0 241 aa14.57□□□□□ -0.08
CCM2-209ENST00000477605 TEX45Q8NA69 505 aa14.57□□□□□ -0.08
CCM2-209ENST00000477605 H1FXQ92522 213 aaKnown RBP14.57□□□□□ -0.08
CCM2-209ENST00000477605 LOC400499M0QZD8 3231 aa14.57□□□□□ -0.08
CCM2-209ENST00000477605 RAI1Q7Z5J4 1906 aaPredicted RBP14.57□□□□□ -0.08
CCM2-209ENST00000477605 PRRG2O14669 202 aa14.57□□□□□ -0.08
CCM2-209ENST00000477605 FCN3O75636 299 aa14.57□□□□□ -0.08
CCM2-209ENST00000477605 AMTP48728 403 aa14.57□□□□□ -0.08
CCM2-209ENST00000477605 TRGV9Q99603 122 aa14.57□□□□□ -0.08
CCM2-209ENST00000477605 A0A0G2JNJ9 132 aa14.56□□□□□ -0.08
CCM2-209ENST00000477605 DIRC3C9JPN6 131 aa14.56□□□□□ -0.08
CCM2-209ENST00000477605 PYYP10082 97 aa14.56□□□□□ -0.08
CCM2-209ENST00000477605 HIST1H1EP10412 219 aaKnown RBP14.56□□□□□ -0.08
CCM2-209ENST00000477605 SSBP2P81877 361 aaPredicted RBP14.56□□□□□ -0.08
CCM2-209ENST00000477605 PAX2Q02962 417 aa14.56□□□□□ -0.08
CCM2-209ENST00000477605 TNFRSF14Q92956 283 aa14.56□□□□□ -0.08
CCM2-209ENST00000477605 Q9UFV3 132 aa14.56□□□□□ -0.08
CCM2-209ENST00000477605 KLF12Q9Y4X4 402 aa14.56□□□□□ -0.08
CCM2-209ENST00000477605 KLK10O43240 276 aa14.56□□□□□ -0.08
CCM2-209ENST00000477605 BSPH1Q075Z2 132 aa14.56□□□□□ -0.08
CCM2-209ENST00000477605 TDRG1Q3Y452 100 aa14.56□□□□□ -0.08
CCM2-209ENST00000477605 TMEM155Q4W5P6 130 aa14.56□□□□□ -0.08
CCM2-209ENST00000477605 ATP5L2Q7Z4Y8 100 aa14.56□□□□□ -0.08
CCM2-209ENST00000477605 Q8N976 141 aa14.56□□□□□ -0.08
CCM2-209ENST00000477605 NUDT10Q8NFP7 164 aa14.56□□□□□ -0.08
CCM2-209ENST00000477605 C22orf15Q8WYQ4 148 aa14.56□□□□□ -0.08
CCM2-209ENST00000477605 NUDT11Q96G61 164 aa14.56□□□□□ -0.08
CCM2-209ENST00000477605 PRORYQ9H606 182 aa14.56□□□□□ -0.08
CCM2-209ENST00000477605 JKAMPQ9P055 326 aa14.56□□□□□ -0.08
CCM2-209ENST00000477605 EPDR1Q9UM22 224 aa14.56□□□□□ -0.08
CCM2-209ENST00000477605 FOSL1P15407 271 aa14.55□□□□□ -0.08
CCM2-209ENST00000477605 PRRX1P54821 245 aa14.55□□□□□ -0.08
CCM2-209ENST00000477605 KRTDAPP60985 99 aa14.55□□□□□ -0.08
CCM2-209ENST00000477605 SLC35B1P78383 322 aa14.55□□□□□ -0.08
CCM2-209ENST00000477605 KIAA1644Q3SXP7 199 aa14.55□□□□□ -0.08
CCM2-209ENST00000477605 LINC00305Q7Z4B0 112 aa14.55□□□□□ -0.08
CCM2-209ENST00000477605 TSKUQ8WUA8 353 aa14.55□□□□□ -0.08
CCM2-209ENST00000477605 DYSFO75923 2080 aa14.55□□□□□ -0.08
CCM2-209ENST00000477605 A0A1W2PPI3 338 aa14.54□□□□□ -0.08
CCM2-209ENST00000477605 THBDP07204 575 aa14.54□□□□□ -0.08
CCM2-209ENST00000477605 LOXP28300 417 aaPredicted RBP14.54□□□□□ -0.08
CCM2-209ENST00000477605 CA7P43166 264 aa14.54□□□□□ -0.08
CCM2-209ENST00000477605 KLF5Q13887 457 aaPredicted RBP14.54□□□□□ -0.08
CCM2-209ENST00000477605 TMEM190Q8WZ59 177 aa14.54□□□□□ -0.08
CCM2-209ENST00000477605 CCL17Q92583 94 aa14.54□□□□□ -0.08
CCM2-209ENST00000477605 LINC00479Q96M42 142 aa14.54□□□□□ -0.08
CCM2-209ENST00000477605 FAM103A1Q9BTL3 118 aaKnown RBP14.54□□□□□ -0.08
CCM2-209ENST00000477605 TNFRSF19Q9NS68 423 aa14.54□□□□□ -0.08
CCM2-209ENST00000477605 PAM16Q9Y3D7 125 aa14.54□□□□□ -0.08
CCM2-209ENST00000477605 CORTO00230 105 aa14.54□□□□□ -0.08
CCM2-209ENST00000477605 SLC25A17O43808 307 aa14.54□□□□□ -0.08
CCM2-209ENST00000477605 OR2J3O76001 311 aa14.54□□□□□ -0.08
CCM2-209ENST00000477605 C10orf55Q5SWW7 151 aa14.54□□□□□ -0.08
CCM2-209ENST00000477605 LYPD2Q6UXB3 125 aa14.54□□□□□ -0.08
CCM2-209ENST00000477605 FAM168AQ92567 244 aa14.54□□□□□ -0.08
CCM2-209ENST00000477605 C7orf69Q9H7B7 122 aa14.54□□□□□ -0.08
CCM2-209ENST00000477605 K7EM74 188 aa14.53□□□□□ -0.08
CCM2-209ENST00000477605 RPLP1P05386 114 aaKnown RBP14.53□□□□□ -0.08
CCM2-209ENST00000477605 UBE2G1P62253 170 aa14.53□□□□□ -0.08
CCM2-209ENST00000477605 DIAPH2-AS1Q14236 149 aa14.53□□□□□ -0.08
CCM2-209ENST00000477605 MRGPRG-AS1Q2M3A8 158 aa14.53□□□□□ -0.08
CCM2-209ENST00000477605 TMEM116Q8NCL8 245 aa14.53□□□□□ -0.08
CCM2-209ENST00000477605 NUP35Q8NFH5 326 aa14.53□□□□□ -0.08
CCM2-209ENST00000477605 TMEM68Q96MH6 324 aa14.53□□□□□ -0.08
CCM2-209ENST00000477605 RBM14Q96PK6 669 aaKnown RBP14.53□□□□□ -0.08
CCM2-209ENST00000477605 RCHY1Q96PM5 261 aa14.53□□□□□ -0.08
CCM2-209ENST00000477605 SMG1Q96Q15 3661 aaKnown RBP14.53□□□□□ -0.08
CCM2-209ENST00000477605 IGLC7A0M8Q6 106 aa14.53□□□□□ -0.08
CCM2-209ENST00000477605 IGHV1-8P0DP01 117 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms