RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 LYL1P12980 280 aa11.77□□□□□ -0.53
SEC13-215ENST00000477547 HBG1P69891 147 aa11.77□□□□□ -0.53
SEC13-215ENST00000477547 HBG2P69892 147 aa11.77□□□□□ -0.53
SEC13-215ENST00000477547 ARL16Q0P5N6 197 aa11.77□□□□□ -0.53
SEC13-215ENST00000477547 Q5BKY6 102 aa11.77□□□□□ -0.53
SEC13-215ENST00000477547 LILRB2Q8N423 598 aa11.77□□□□□ -0.53
SEC13-215ENST00000477547 CHRDL1Q9BU40 450 aa11.77□□□□□ -0.53
SEC13-215ENST00000477547 G3V3Q6 166 aa11.76□□□□□ -0.53
SEC13-215ENST00000477547 SMLR1H3BR10 107 aa11.76□□□□□ -0.53
SEC13-215ENST00000477547 ADMP35318 185 aa11.76□□□□□ -0.53
SEC13-215ENST00000477547 GAMTQ14353 236 aa11.76□□□□□ -0.53
SEC13-215ENST00000477547 LINC00482Q8N8I6 264 aa11.76□□□□□ -0.53
SEC13-215ENST00000477547 TMEM116Q8NCL8 245 aa11.76□□□□□ -0.53
SEC13-215ENST00000477547 NPIPB3Q92617 1050 aa11.76□□□□□ -0.53
SEC13-215ENST00000477547 IGHV3-35A0A0C4DH35 117 aa11.75□□□□□ -0.53
SEC13-215ENST00000477547 CTSGP08311 255 aa11.75□□□□□ -0.53
SEC13-215ENST00000477547 IGLC1P0CG04 106 aa11.75□□□□□ -0.53
SEC13-215ENST00000477547 OR10J1P30954 320 aa11.75□□□□□ -0.53
SEC13-215ENST00000477547 BAXQ07812 192 aa11.75□□□□□ -0.53
SEC13-215ENST00000477547 AKAP14Q86UN6 197 aa11.75□□□□□ -0.53
SEC13-215ENST00000477547 C1QL4Q86Z23 238 aa11.75□□□□□ -0.53
SEC13-215ENST00000477547 OR1S2Q8NGQ3 325 aa11.75□□□□□ -0.53
SEC13-215ENST00000477547 NOTCH1P46531 2555 aa11.74□□□□□ -0.53
SEC13-215ENST00000477547 TRAV30A0A087WSZ9 112 aa11.74□□□□□ -0.53
SEC13-215ENST00000477547 ZFP92A6NM28 416 aa11.74□□□□□ -0.53
SEC13-215ENST00000477547 FNDC10F2Z333 226 aa11.74□□□□□ -0.53
SEC13-215ENST00000477547 OR2C1O95371 312 aa11.74□□□□□ -0.53
SEC13-215ENST00000477547 RPL12P30050 165 aaKnown RBP11.74□□□□□ -0.53
SEC13-215ENST00000477547 SYNJ2BPP57105 145 aa11.74□□□□□ -0.53
SEC13-215ENST00000477547 RELQ04864 619 aaPredicted RBP11.74□□□□□ -0.53
SEC13-215ENST00000477547 TIGITQ495A1 244 aa11.74□□□□□ -0.53
SEC13-215ENST00000477547 TMEM147Q9BVK8 224 aa11.74□□□□□ -0.53
SEC13-215ENST00000477547 GGACTQ9BVM4 153 aa11.74□□□□□ -0.53
SEC13-215ENST00000477547 HSPB11Q9Y547 144 aa11.74□□□□□ -0.53
SEC13-215ENST00000477547 UBE2L5PA0A1B0GUS4 154 aa11.73□□□□□ -0.53
SEC13-215ENST00000477547 IGKV1-17P01599 117 aa11.73□□□□□ -0.53
SEC13-215ENST00000477547 NUP62P37198 522 aaPredicted RBP11.73□□□□□ -0.53
SEC13-215ENST00000477547 NHLH2Q02577 135 aa11.73□□□□□ -0.53
SEC13-215ENST00000477547 THAP8Q8NA92 274 aa11.73□□□□□ -0.53
SEC13-215ENST00000477547 OR5C1Q8NGR4 320 aa11.73□□□□□ -0.53
SEC13-215ENST00000477547 TMEM190Q8WZ59 177 aa11.73□□□□□ -0.53
SEC13-215ENST00000477547 DLX4Q92988 240 aaPredicted RBP11.73□□□□□ -0.53
SEC13-215ENST00000477547 ST6GAL2Q96JF0 529 aa11.73□□□□□ -0.53
SEC13-215ENST00000477547 UQCC1Q9NVA1 299 aa11.73□□□□□ -0.53
SEC13-215ENST00000477547 NDUFA4O00483 81 aa11.72□□□□□ -0.53
SEC13-215ENST00000477547 OVOL1O14753 267 aa11.72□□□□□ -0.53
SEC13-215ENST00000477547 CD33P20138 364 aa11.72□□□□□ -0.53
SEC13-215ENST00000477547 S100A11P31949 105 aa11.72□□□□□ -0.53
SEC13-215ENST00000477547 CLINT1Q14677 625 aa11.72□□□□□ -0.53
SEC13-215ENST00000477547 ZNF600Q6ZNG1 722 aa11.72□□□□□ -0.53
SEC13-215ENST00000477547 TMEM144Q7Z5S9 345 aa11.72□□□□□ -0.53
SEC13-215ENST00000477547 AQP10Q96PS8 301 aa11.72□□□□□ -0.53
SEC13-215ENST00000477547 NBEAL2Q6ZNJ1 2754 aa11.72□□□□□ -0.53
SEC13-215ENST00000477547 IGKV1D-37A0A075B6S9 117 aa11.71□□□□□ -0.53
SEC13-215ENST00000477547 IGKV1OR2-108A0A075B7D4 117 aa11.71□□□□□ -0.53
SEC13-215ENST00000477547 ZNF320A2RRD8 509 aa11.71□□□□□ -0.53
SEC13-215ENST00000477547 ARPC5O15511 151 aa11.71□□□□□ -0.53
SEC13-215ENST00000477547 KLF5Q13887 457 aaPredicted RBP11.71□□□□□ -0.53
SEC13-215ENST00000477547 FAM106AQ4KMX7 169 aa11.71□□□□□ -0.53
SEC13-215ENST00000477547 UNQ9165/PRO28630Q6UXU0 137 aa11.71□□□□□ -0.53
SEC13-215ENST00000477547 REC114Q7Z4M0 266 aa11.71□□□□□ -0.53
SEC13-215ENST00000477547 ZNF546Q86UE3 836 aa11.71□□□□□ -0.53
SEC13-215ENST00000477547 GPHB5Q86YW7 130 aa11.71□□□□□ -0.53
SEC13-215ENST00000477547 TCTE3Q8IZS6 198 aa11.71□□□□□ -0.53
SEC13-215ENST00000477547 INO80EQ8NBZ0 244 aaPredicted RBP11.71□□□□□ -0.53
SEC13-215ENST00000477547 RCC1LQ96I51 464 aaKnown RBP11.71□□□□□ -0.53
SEC13-215ENST00000477547 ZNF414Q96IQ9 312 aa11.71□□□□□ -0.53
SEC13-215ENST00000477547 TRGV9Q99603 122 aa11.71□□□□□ -0.53
SEC13-215ENST00000477547 SMIM3Q9BZL3 60 aa11.71□□□□□ -0.53
SEC13-215ENST00000477547 TNFSF18Q9UNG2 199 aa11.71□□□□□ -0.53
SEC13-215ENST00000477547 PUS1Q9Y606 427 aaKnown RBP eCLIP11.71□□□□□ -0.53
SEC13-215ENST00000477547 KMT2CQ8NEZ4 4911 aaKnown RBP11.71□□□□□ -0.54
SEC13-215ENST00000477547 IGHV3OR16-8A0A075B7F1 116 aa11.7□□□□□ -0.54
SEC13-215ENST00000477547 RNF222A6NCQ9 220 aa11.7□□□□□ -0.54
SEC13-215ENST00000477547 A8MWP6 167 aa11.7□□□□□ -0.54
SEC13-215ENST00000477547 YIF1AO95070 293 aa11.7□□□□□ -0.54
SEC13-215ENST00000477547 TOMM40O96008 361 aa11.7□□□□□ -0.54
SEC13-215ENST00000477547 FABP1P07148 127 aa11.7□□□□□ -0.54
SEC13-215ENST00000477547 YPEL3P61236 119 aaPredicted RBP11.7□□□□□ -0.54
SEC13-215ENST00000477547 ATP6V1FQ16864 119 aa11.7□□□□□ -0.54
SEC13-215ENST00000477547 VWC2Q2TAL6 325 aa11.7□□□□□ -0.54
SEC13-215ENST00000477547 TEPPQ6URK8 271 aa11.7□□□□□ -0.54
SEC13-215ENST00000477547 OR9G4Q8NGQ1 327 aa11.7□□□□□ -0.54
SEC13-215ENST00000477547 ATP5SQ99766 215 aa11.7□□□□□ -0.54
SEC13-215ENST00000477547 C20orf24Q9BUV8 137 aa11.7□□□□□ -0.54
SEC13-215ENST00000477547 NPVFQ9HCQ7 196 aa11.7□□□□□ -0.54
SEC13-215ENST00000477547 PEMTQ9UBM1 199 aa11.7□□□□□ -0.54
SEC13-215ENST00000477547 FBXL17Q9UF56 701 aa11.7□□□□□ -0.54
SEC13-215ENST00000477547 LGALS9O00182 355 aa11.69□□□□□ -0.54
SEC13-215ENST00000477547 ZNF90Q03938 601 aa11.69□□□□□ -0.54
SEC13-215ENST00000477547 ZFAND3Q9H8U3 227 aa11.69□□□□□ -0.54
SEC13-215ENST00000477547 WDR83OSQ9Y284 106 aa11.69□□□□□ -0.54
SEC13-215ENST00000477547 UFC1Q9Y3C8 167 aa11.69□□□□□ -0.54
SEC13-215ENST00000477547 RYR3Q15413 4870 aa11.68□□□□□ -0.54
SEC13-215ENST00000477547 DFFBO76075 338 aa11.68□□□□□ -0.54
SEC13-215ENST00000477547 RD3LP0DJH9 198 aa11.68□□□□□ -0.54
SEC13-215ENST00000477547 FGF7P21781 194 aa11.68□□□□□ -0.54
SEC13-215ENST00000477547 AP2S1P53680 142 aaPredicted RBP11.68□□□□□ -0.54
SEC13-215ENST00000477547 OR2F1Q13607 317 aa11.68□□□□□ -0.54
SEC13-215ENST00000477547 TOMM20LQ6UXN7 152 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms