RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 OR1S2Q8NGQ3 325 aa11.61□□□□□ -0.55
CLDN11-204ENST00000477531 GRAMD2BQ96HH9 432 aa11.61□□□□□ -0.55
CLDN11-204ENST00000477531 MS4A6AQ9H2W1 248 aa11.61□□□□□ -0.55
CLDN11-204ENST00000477531 RABAC1Q9UI14 185 aa11.61□□□□□ -0.55
CLDN11-204ENST00000477531 AKR1C4P17516 323 aa11.6□□□□□ -0.55
CLDN11-204ENST00000477531 S100A5P33763 92 aa11.6□□□□□ -0.55
CLDN11-204ENST00000477531 EIF2B2P49770 351 aaKnown RBP11.6□□□□□ -0.55
CLDN11-204ENST00000477531 TMEM187Q14656 261 aa11.6□□□□□ -0.55
CLDN11-204ENST00000477531 ZNF124Q15973 351 aa11.6□□□□□ -0.55
CLDN11-204ENST00000477531 TIGITQ495A1 244 aa11.6□□□□□ -0.55
CLDN11-204ENST00000477531 Q8WTZ3 238 aa11.6□□□□□ -0.55
CLDN11-204ENST00000477531 GATAD1Q8WUU5 269 aa11.6□□□□□ -0.55
CLDN11-204ENST00000477531 MRPL36Q9P0J6 103 aaKnown RBP11.6□□□□□ -0.55
CLDN11-204ENST00000477531 NUPR2A6NF83 97 aa11.59□□□□□ -0.55
CLDN11-204ENST00000477531 ATF4P18848 351 aaPredicted RBP11.59□□□□□ -0.55
CLDN11-204ENST00000477531 CRYBB3P26998 211 aa11.59□□□□□ -0.55
CLDN11-204ENST00000477531 CCR6P51684 374 aa11.59□□□□□ -0.55
CLDN11-204ENST00000477531 RND2P52198 227 aa11.59□□□□□ -0.55
CLDN11-204ENST00000477531 AP3S2P59780 193 aa11.59□□□□□ -0.55
CLDN11-204ENST00000477531 DEFB131AP59861 70 aa11.59□□□□□ -0.55
CLDN11-204ENST00000477531 SRPXP78539 464 aa11.59□□□□□ -0.55
CLDN11-204ENST00000477531 STHQ8IWL8 128 aa11.59□□□□□ -0.55
CLDN11-204ENST00000477531 LILRB2Q8N423 598 aa11.59□□□□□ -0.55
CLDN11-204ENST00000477531 STXBP6Q8NFX7 210 aa11.59□□□□□ -0.55
CLDN11-204ENST00000477531 PLECQ15149 4684 aaKnown RBP11.58□□□□□ -0.56
CLDN11-204ENST00000477531 NXPH3O95157 252 aa11.58□□□□□ -0.56
CLDN11-204ENST00000477531 IFNA10P01566 189 aa11.58□□□□□ -0.56
CLDN11-204ENST00000477531 IGKV1-17P01599 117 aa11.58□□□□□ -0.56
CLDN11-204ENST00000477531 NPY1RP25929 384 aa11.58□□□□□ -0.56
CLDN11-204ENST00000477531 OR10J1P30954 320 aa11.58□□□□□ -0.56
CLDN11-204ENST00000477531 P2RY1P47900 373 aa11.58□□□□□ -0.56
CLDN11-204ENST00000477531 PYDC2Q56P42 97 aa11.58□□□□□ -0.56
CLDN11-204ENST00000477531 PRSS54Q6PEW0 395 aa11.58□□□□□ -0.56
CLDN11-204ENST00000477531 LGI3Q8N145 548 aa11.58□□□□□ -0.56
CLDN11-204ENST00000477531 RARRES2Q99969 163 aa11.58□□□□□ -0.56
CLDN11-204ENST00000477531 SOSTQ9BQB4 213 aa11.58□□□□□ -0.56
CLDN11-204ENST00000477531 KLK5Q9Y337 293 aaPredicted RBP11.58□□□□□ -0.56
CLDN11-204ENST00000477531 U3KQ87 197 aa11.58□□□□□ -0.56
CLDN11-204ENST00000477531 A0A0B4J2A0 478 aa11.57□□□□□ -0.56
CLDN11-204ENST00000477531 YPEL3P61236 119 aaPredicted RBP11.57□□□□□ -0.56
CLDN11-204ENST00000477531 SMCO1Q147U7 214 aa11.57□□□□□ -0.56
CLDN11-204ENST00000477531 CNPY1Q3B7I2 92 aa11.57□□□□□ -0.56
CLDN11-204ENST00000477531 NMSQ5H8A3 153 aa11.57□□□□□ -0.56
CLDN11-204ENST00000477531 LEMD1Q68G75 181 aa11.57□□□□□ -0.56
CLDN11-204ENST00000477531 SHPKQ9UHJ6 478 aa11.57□□□□□ -0.56
CLDN11-204ENST00000477531 HELTA6NFD8 242 aa11.56□□□□□ -0.56
CLDN11-204ENST00000477531 CA1P00915 261 aaPredicted RBP11.56□□□□□ -0.56
CLDN11-204ENST00000477531 HNRNPCP07910 306 aaKnown RBP eCLIP11.56□□□□□ -0.56
CLDN11-204ENST00000477531 IGLC1P0CG04 106 aa11.56□□□□□ -0.56
CLDN11-204ENST00000477531 AP2S1P53680 142 aaPredicted RBP11.56□□□□□ -0.56
CLDN11-204ENST00000477531 LYZL2Q7Z4W2 148 aa11.56□□□□□ -0.56
CLDN11-204ENST00000477531 TOMM5Q8N4H5 51 aa11.56□□□□□ -0.56
CLDN11-204ENST00000477531 OR11H2Q8NH07 326 aa11.56□□□□□ -0.56
CLDN11-204ENST00000477531 OR1S1Q8NH92 325 aa11.56□□□□□ -0.56
CLDN11-204ENST00000477531 DTD1Q8TEA8 209 aa11.56□□□□□ -0.56
CLDN11-204ENST00000477531 ACY3Q96HD9 319 aa11.56□□□□□ -0.56
CLDN11-204ENST00000477531 PRR13Q9NZ81 148 aa11.56□□□□□ -0.56
CLDN11-204ENST00000477531 PTTG2Q9NZH5 202 aa11.56□□□□□ -0.56
CLDN11-204ENST00000477531 IFNA4P05014 189 aa11.55□□□□□ -0.56
CLDN11-204ENST00000477531 ATP5IP56385 69 aaPredicted RBP11.55□□□□□ -0.56
CLDN11-204ENST00000477531 RBMS2Q15434 407 aaKnown RBP11.55□□□□□ -0.56
CLDN11-204ENST00000477531 CEMP1Q6PRD7 247 aaPredicted RBP11.55□□□□□ -0.56
CLDN11-204ENST00000477531 TMED4Q7Z7H5 227 aa11.55□□□□□ -0.56
CLDN11-204ENST00000477531 NPIPB3Q92617 1050 aa11.55□□□□□ -0.56
CLDN11-204ENST00000477531 HSPB7Q9UBY9 170 aa11.55□□□□□ -0.56
CLDN11-204ENST00000477531 ALMS1Q8TCU4 4167 aa11.55□□□□□ -0.56
CLDN11-204ENST00000477531 DUXBA0A1W2PPF3 345 aa11.54□□□□□ -0.56
CLDN11-204ENST00000477531 K7EQG2 157 aa11.54□□□□□ -0.56
CLDN11-204ENST00000477531 IL4P05112 153 aa11.54□□□□□ -0.56
CLDN11-204ENST00000477531 RD3LP0DJH9 198 aa11.54□□□□□ -0.56
CLDN11-204ENST00000477531 SUPT4H1P63272 117 aaKnown RBP11.54□□□□□ -0.56
CLDN11-204ENST00000477531 EWSR1Q01844 656 aaKnown RBP eCLIP11.54□□□□□ -0.56
CLDN11-204ENST00000477531 KLF9Q13886 244 aaPredicted RBP11.54□□□□□ -0.56
CLDN11-204ENST00000477531 TMEM128Q5BJH2 165 aa11.54□□□□□ -0.56
CLDN11-204ENST00000477531 LINC00299Q6ZSB3 139 aa11.54□□□□□ -0.56
CLDN11-204ENST00000477531 FAM24BQ8N5W8 94 aa11.54□□□□□ -0.56
CLDN11-204ENST00000477531 RBKSQ9H477 322 aa11.54□□□□□ -0.56
CLDN11-204ENST00000477531 PFDN2Q9UHV9 154 aa11.54□□□□□ -0.56
CLDN11-204ENST00000477531 TOMM40O96008 361 aa11.53□□□□□ -0.56
CLDN11-204ENST00000477531 ZNF688P0C7X2 276 aa11.53□□□□□ -0.56
CLDN11-204ENST00000477531 DHRS2Q13268 280 aa11.53□□□□□ -0.56
CLDN11-204ENST00000477531 TMEM41BQ5BJD5 291 aa11.53□□□□□ -0.56
CLDN11-204ENST00000477531 SPANXN2Q5MJ10 180 aa11.53□□□□□ -0.56
CLDN11-204ENST00000477531 TMEM170AQ8WVE7 144 aa11.53□□□□□ -0.56
CLDN11-204ENST00000477531 DEDD2Q8WXF8 326 aa11.53□□□□□ -0.56
CLDN11-204ENST00000477531 SLC25A21Q9BQT8 299 aaPredicted RBP11.53□□□□□ -0.56
CLDN11-204ENST00000477531 MFFQ9GZY8 342 aa11.53□□□□□ -0.56
CLDN11-204ENST00000477531 U3KQE9 123 aa11.53□□□□□ -0.56
CLDN11-204ENST00000477531 LY6G6CO95867 125 aa11.52□□□□□ -0.57
CLDN11-204ENST00000477531 SPP1P10451 314 aa11.52□□□□□ -0.57
CLDN11-204ENST00000477531 VAMP1P23763 118 aa11.52□□□□□ -0.57
CLDN11-204ENST00000477531 GPX4P36969 197 aaPredicted RBP11.52□□□□□ -0.57
CLDN11-204ENST00000477531 NUP62P37198 522 aaPredicted RBP11.52□□□□□ -0.57
CLDN11-204ENST00000477531 RAB11AP62491 216 aa11.52□□□□□ -0.57
CLDN11-204ENST00000477531 MORN3Q6PF18 240 aaPredicted RBP11.52□□□□□ -0.57
CLDN11-204ENST00000477531 C16orf54Q6UWD8 224 aa11.52□□□□□ -0.57
CLDN11-204ENST00000477531 SLC35E1Q96K37 410 aa11.52□□□□□ -0.57
CLDN11-204ENST00000477531 ZFP92A6NM28 416 aa11.51□□□□□ -0.57
CLDN11-204ENST00000477531 MED6O75586 246 aa11.51□□□□□ -0.57
CLDN11-204ENST00000477531 FABP1P07148 127 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms